RNA–Protein interactions for RNA: ENST00000581593.1

CDK12-206, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-206ENST00000581593 AEBP2Q6ZN18 517 aaPredicted RBP22.34■■□□□ 1.17
CDK12-206ENST00000581593 CHIC1Q5VXU3 224 aa21.65■■□□□ 1.06
CDK12-206ENST00000581593 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
CDK12-206ENST00000581593 SENP3Q9H4L4 574 aaPredicted RBP18.95■□□□□ 0.62
CDK12-206ENST00000581593 FOXD1Q16676 465 aa17.63■□□□□ 0.41
CDK12-206ENST00000581593 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
CDK12-206ENST00000581593 ADRA2BP18089 450 aa16.89■□□□□ 0.29
CDK12-206ENST00000581593 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
CDK12-206ENST00000581593 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
CDK12-206ENST00000581593 MSH5O43196 834 aa16.27■□□□□ 0.2
CDK12-206ENST00000581593 PPP4R3CPQ6ZMV5 832 aa15.46■□□□□ 0.07
CDK12-206ENST00000581593 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
CDK12-206ENST00000581593 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
CDK12-206ENST00000581593 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
CDK12-206ENST00000581593 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
CDK12-206ENST00000581593 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
CDK12-206ENST00000581593 NCBP3Q53F19 620 aaKnown RBP14.99□□□□□ -0.01
CDK12-206ENST00000581593 KCNA4P22459 653 aa14.98□□□□□ -0.01
CDK12-206ENST00000581593 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
CDK12-206ENST00000581593 RNF216Q9NWF9 866 aaPredicted RBP14.74□□□□□ -0.05
CDK12-206ENST00000581593 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
CDK12-206ENST00000581593 DCAF8L1A6NGE4 600 aa14.6□□□□□ -0.07
CDK12-206ENST00000581593 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
CDK12-206ENST00000581593 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
CDK12-206ENST00000581593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.12□□□□□ -0.151e-6■■□□□ 12.2
CDK12-206ENST00000581593 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
CDK12-206ENST00000581593 RNF39Q9H2S5 420 aa13.94□□□□□ -0.18
CDK12-206ENST00000581593 U3KPZ7 1027 aaPredicted RBP13.83□□□□□ -0.2
CDK12-206ENST00000581593 ZBTB22O15209 634 aa13.78□□□□□ -0.2
CDK12-206ENST00000581593 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
CDK12-206ENST00000581593 EHMT2Q96KQ7 1210 aa13.76□□□□□ -0.21
CDK12-206ENST00000581593 CACNB1Q02641 598 aaPredicted RBP13.75□□□□□ -0.21
CDK12-206ENST00000581593 C1QBPQ07021 282 aaKnown RBP13.74□□□□□ -0.21
CDK12-206ENST00000581593 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
CDK12-206ENST00000581593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.57□□□□□ -0.24
CDK12-206ENST00000581593 HNRNPUL2Q1KMD3 747 aaKnown RBP13.57□□□□□ -0.24
CDK12-206ENST00000581593 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
CDK12-206ENST00000581593 SAMD1Q6SPF0 538 aaPredicted RBP13.53□□□□□ -0.24
CDK12-206ENST00000581593 SPINK5Q9NQ38 1064 aaPredicted RBP13.53□□□□□ -0.24
CDK12-206ENST00000581593 CAPN15O75808 1086 aa13.5□□□□□ -0.25
CDK12-206ENST00000581593 APLP2Q06481 763 aa13.45□□□□□ -0.26
CDK12-206ENST00000581593 TRHP20396 242 aaPredicted RBP13.41□□□□□ -0.26
CDK12-206ENST00000581593 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
CDK12-206ENST00000581593 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
CDK12-206ENST00000581593 ABCB7O75027 752 aa13.26□□□□□ -0.29
CDK12-206ENST00000581593 ATXN8OSP0DMR3 200 aa13.24□□□□□ -0.29
CDK12-206ENST00000581593 DSG3P32926 999 aa13.23□□□□□ -0.29
CDK12-206ENST00000581593 POLA2Q14181 598 aa13.13□□□□□ -0.31
CDK12-206ENST00000581593 ZBTB12Q9Y330 459 aaPredicted RBP12.83□□□□□ -0.36
CDK12-206ENST00000581593 FBLN2P98095 1184 aa12.77□□□□□ -0.37
CDK12-206ENST00000581593 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
CDK12-206ENST00000581593 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
CDK12-206ENST00000581593 RBM42Q9BTD8 480 aaKnown RBP12.59□□□□□ -0.39
CDK12-206ENST00000581593 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
CDK12-206ENST00000581593 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
CDK12-206ENST00000581593 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
CDK12-206ENST00000581593 ZNF692Q9BU19 519 aaPredicted RBP12.47□□□□□ -0.41
CDK12-206ENST00000581593 AKT1S1Q96B36 256 aa12.41□□□□□ -0.42
CDK12-206ENST00000581593 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
CDK12-206ENST00000581593 SSUH2Q9Y2M2 353 aa12.36□□□□□ -0.43
CDK12-206ENST00000581593 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
CDK12-206ENST00000581593 FKBP8Q14318 412 aa12.32□□□□□ -0.44
CDK12-206ENST00000581593 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDK12-206ENST00000581593 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
CDK12-206ENST00000581593 CLEC11AQ9Y240 323 aa12.21□□□□□ -0.45
CDK12-206ENST00000581593 CHRDL2Q6WN34 429 aa12.17□□□□□ -0.46
CDK12-206ENST00000581593 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
CDK12-206ENST00000581593 PROM2Q8N271 834 aa12.08□□□□□ -0.48
CDK12-206ENST00000581593 PRR29P0C7W0 189 aa12.03□□□□□ -0.48
CDK12-206ENST00000581593 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
CDK12-206ENST00000581593 PIP4P2Q8N4L2 257 aa11.99□□□□□ -0.49
CDK12-206ENST00000581593 FXR2P51116 673 aaKnown RBP eCLIP11.94□□□□□ -0.51e-9■■□□□ 13.2
CDK12-206ENST00000581593 POTEHQ6S545 545 aa11.93□□□□□ -0.5
CDK12-206ENST00000581593 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
CDK12-206ENST00000581593 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
CDK12-206ENST00000581593 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
CDK12-206ENST00000581593 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
CDK12-206ENST00000581593 MIER1Q8N108 512 aa11.8□□□□□ -0.52
CDK12-206ENST00000581593 PLCD3Q8N3E9 789 aa11.78□□□□□ -0.52
CDK12-206ENST00000581593 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
CDK12-206ENST00000581593 FARP1Q9Y4F1 1045 aaPredicted RBP11.73□□□□□ -0.53
CDK12-206ENST00000581593 PLEKHG5O94827 1062 aa11.72□□□□□ -0.53
CDK12-206ENST00000581593 HAX1O00165 279 aa11.68□□□□□ -0.54
CDK12-206ENST00000581593 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.54
CDK12-206ENST00000581593 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDK12-206ENST00000581593 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
CDK12-206ENST00000581593 ZBTB47Q9UFB7 747 aaPredicted RBP11.57□□□□□ -0.56
CDK12-206ENST00000581593 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
CDK12-206ENST00000581593 C19orf67A6NJJ6 358 aa11.55□□□□□ -0.56
CDK12-206ENST00000581593 EVX2Q03828 476 aa11.55□□□□□ -0.56
CDK12-206ENST00000581593 IFNLR1Q8IU57 520 aaPredicted RBP11.55□□□□□ -0.56
CDK12-206ENST00000581593 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
CDK12-206ENST00000581593 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
CDK12-206ENST00000581593 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
CDK12-206ENST00000581593 PAK3O75914 559 aaPredicted RBP11.47□□□□□ -0.57
CDK12-206ENST00000581593 NUBP1P53384 320 aa11.46□□□□□ -0.57
CDK12-206ENST00000581593 SPOCK2Q92563 424 aa11.44□□□□□ -0.58
CDK12-206ENST00000581593 SP7Q8TDD2 431 aaPredicted RBP11.41□□□□□ -0.58
CDK12-206ENST00000581593 DCAF8Q5TAQ9 597 aa11.4□□□□□ -0.58
CDK12-206ENST00000581593 FAM212AQ96EL1 285 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms