RNA–Protein interactions for RNA: ENST00000581486.5

NCOA4-204, Transcript of nuclear receptor coactivator 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCOA4, Length 3,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-204ENST00000581486 U2AF2P26368 475 aaKnown RBP eCLIP8.92□□□□□ -0.981e-20■■■□□ 15.5
NCOA4-204ENST00000581486 UPF1Q92900 1129 aaKnown RBP eCLIP7.82□□□□□ -1.161e-18■■■■□ 22.2
NCOA4-204ENST00000581486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.86□□□□□ -0.995e-17■□□□□ 11.2
NCOA4-204ENST00000581486 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.41□□□□□ -1.225e-14■■□□□ 11.9
NCOA4-204ENST00000581486 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.85□□□□□ -0.999e-14■■■■■ 42.2
NCOA4-204ENST00000581486 PABPC4Q13310 644 aaKnown RBP eCLIP8.68□□□□□ -1.021e-11■□□□□ 9.2
NCOA4-204ENST00000581486 TARDBPQ13148 414 aaKnown RBP eCLIP7.47□□□□□ -1.215e-11■■■□□ 16.3
NCOA4-204ENST00000581486 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.08□□□□□ -1.121e-10■■□□□ 14.1
NCOA4-204ENST00000581486 DDX6P26196 483 aaKnown RBP eCLIP7.3□□□□□ -1.244e-10■■■■□ 22.1
NCOA4-204ENST00000581486 SUB1P53999 127 aaKnown RBP eCLIP6.36□□□□□ -1.397e-10■■□□□ 14.2
NCOA4-204ENST00000581486 PRPF4O43172 522 aaKnown RBP eCLIP7.85□□□□□ -1.157e-10■■■□□ 14.6
NCOA4-204ENST00000581486 YBX3P16989 372 aaKnown RBP eCLIP7.98□□□□□ -1.132e-9■■□□□ 12.1
NCOA4-204ENST00000581486 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.32□□□□□ -1.082e-9■□□□□ 10.6
NCOA4-204ENST00000581486 RBM15Q96T37 977 aaKnown RBP eCLIP8.23□□□□□ -1.095e-9■□□□□ 10
NCOA4-204ENST00000581486 PCBP2Q15366 365 aaKnown RBP eCLIP7.66□□□□□ -1.181e-8■■■■□ 19.7
NCOA4-204ENST00000581486 FUBP3Q96I24 572 aaKnown RBP eCLIP7.62□□□□□ -1.191e-8■□□□□ 8.5
NCOA4-204ENST00000581486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.72□□□□□ -1.172e-8■■■■■ 33.5
NCOA4-204ENST00000581486 HNRNPMP52272 730 aaKnown RBP eCLIP10.61□□□□□ -0.712e-8■□□□□ 10.3
NCOA4-204ENST00000581486 G3BP1Q13283 466 aaKnown RBP eCLIP9.43□□□□□ -0.94e-8■■□□□ 12
NCOA4-204ENST00000581486 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.78□□□□□ -0.844e-8■□□□□ 8.6
NCOA4-204ENST00000581486 KHSRPQ92945 711 aaKnown RBP eCLIP8.02□□□□□ -1.135e-8■■■■□ 19.6
NCOA4-204ENST00000581486 TIA1P31483 386 aaKnown RBP eCLIP7.41□□□□□ -1.226e-8■■■■□ 24.2
NCOA4-204ENST00000581486 PPIGQ13427 754 aaKnown RBP eCLIP7.41□□□□□ -1.226e-8■■□□□ 11.9
NCOA4-204ENST00000581486 AKAP1Q92667 903 aaKnown RBP eCLIP7.08□□□□□ -1.281e-7■□□□□ 8.5
NCOA4-204ENST00000581486 DDX3XO00571 662 aaKnown RBP eCLIP8.34□□□□□ -1.071e-7■■■■□ 23.1
NCOA4-204ENST00000581486 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.9□□□□□ -1.311e-7■■■■■ 30.5
NCOA4-204ENST00000581486 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.45□□□□□ -1.221e-7■□□□□ 10.1
NCOA4-204ENST00000581486 FMR1Q06787 632 aaKnown RBP eCLIP8.76□□□□□ -1.012e-7■■□□□ 13.2
NCOA4-204ENST00000581486 HNRNPCP07910 306 aaKnown RBP eCLIP7.67□□□□□ -1.182e-7■■□□□ 13.1
NCOA4-204ENST00000581486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■□□□□ 11.2
NCOA4-204ENST00000581486 RBM22Q9NW64 420 aaKnown RBP eCLIP7.96□□□□□ -1.142e-7■■■■□ 26.2
NCOA4-204ENST00000581486 HNRNPKP61978 463 aaKnown RBP eCLIP7.1□□□□□ -1.272e-7■■■□□ 14.8
NCOA4-204ENST00000581486 RPS3P23396 243 aaKnown RBP eCLIP7.36□□□□□ -1.233e-7■■■□□ 16.5
NCOA4-204ENST00000581486 AQRO60306 1485 aaKnown RBP eCLIP10.61□□□□□ -0.714e-7■■■■□ 25.8
NCOA4-204ENST00000581486 METAP2P50579 478 aaKnown RBP eCLIP9.04□□□□□ -0.964e-7■□□□□ 10.3
NCOA4-204ENST00000581486 FXR2P51116 673 aaKnown RBP eCLIP8.38□□□□□ -1.074e-7■□□□□ 11.1
NCOA4-204ENST00000581486 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.284e-7■■■■■ 30.7
NCOA4-204ENST00000581486 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.82□□□□□ -1.164e-7■■■□□ 17.8
NCOA4-204ENST00000581486 FXR1P51114 621 aaKnown RBP eCLIP8.67□□□□□ -1.025e-7■■■□□ 17.3
NCOA4-204ENST00000581486 PCBP1Q15365 356 aaKnown RBP eCLIP7.66□□□□□ -1.186e-7■■■■■ 35.7
NCOA4-204ENST00000581486 ZNF622Q969S3 477 aaKnown RBP eCLIP8.95□□□□□ -0.987e-7■■■□□ 14.8
NCOA4-204ENST00000581486 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.038e-7■■■□□ 16.7
NCOA4-204ENST00000581486 EFTUD2Q15029 972 aaKnown RBP eCLIP8.15□□□□□ -1.19e-7■■■□□ 16.7
NCOA4-204ENST00000581486 HNRNPLP14866 589 aaKnown RBP eCLIP7.96□□□□□ -1.149e-7■■□□□ 13.8
NCOA4-204ENST00000581486 PUS1Q9Y606 427 aaKnown RBP eCLIP6.81□□□□□ -1.329e-7■■■□□ 18.7
NCOA4-204ENST00000581486 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.09□□□□□ -0.959e-7■■■□□ 19.1
NCOA4-204ENST00000581486 SF3B4Q15427 424 aaKnown RBP eCLIP7.22□□□□□ -1.251e-6■■■□□ 15.6
NCOA4-204ENST00000581486 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.06□□□□□ -0.961e-6■□□□□ 10.8
NCOA4-204ENST00000581486 SFPQP23246 707 aaKnown RBP eCLIP8.96□□□□□ -0.981e-6■□□□□ 8.2
NCOA4-204ENST00000581486 NIP7Q9Y221 180 aaKnown RBP eCLIP9.08□□□□□ -0.961e-6■■■□□ 14.6
NCOA4-204ENST00000581486 SRSF1Q07955 248 aaKnown RBP eCLIP5.92□□□□□ -1.461e-6■■□□□ 11.9
NCOA4-204ENST00000581486 SF3A3Q12874 501 aaKnown RBP eCLIP8.79□□□□□ -11e-6■■■□□ 15.4
NCOA4-204ENST00000581486 TIAL1Q01085 375 aaKnown RBP eCLIP7.48□□□□□ -1.212e-6■■■■□ 21.3
NCOA4-204ENST00000581486 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -12e-6■■■□□ 15.5
NCOA4-204ENST00000581486 NOLC1Q14978 699 aaKnown RBP eCLIP9.03□□□□□ -0.962e-6■■■□□ 15.5
NCOA4-204ENST00000581486 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.76□□□□□ -1.175e-6■■■■□ 25.5
NCOA4-204ENST00000581486 WRNQ14191 1432 aaPredicted RBP eCLIP11.26□□□□□ -0.615e-6■■□□□ 12.5
NCOA4-204ENST00000581486 NIPBLQ6KC79 2804 aaeCLIP6.27□□□□□ -1.416e-6■■■□□ 17.3
NCOA4-204ENST00000581486 IGF2BP3O00425 579 aaKnown RBP eCLIP8.12□□□□□ -1.116e-6■■■■□ 20.5
NCOA4-204ENST00000581486 NCBP2P52298 156 aaKnown RBP eCLIP7.45□□□□□ -1.228e-6■■□□□ 13
Retrieved 60 of 60 RNA–protein pairs in 55.1 ms