RNA–Protein interactions for RNA: ENST00000579798.1

MIR3908-201, Transcript of microRNA 3908, humanhuman

BASIC

Gene MIR3908, Length 126 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3908-201ENST00000579798 AEBP2Q6ZN18 517 aaPredicted RBP40.25■■■■■ 4.03
MIR3908-201ENST00000579798 CHIC1Q5VXU3 224 aa39.01■■■■□ 3.84
MIR3908-201ENST00000579798 SENP3Q9H4L4 574 aaPredicted RBP34.44■■■■□ 3.1
MIR3908-201ENST00000579798 PHF23Q9BUL5 403 aaPredicted RBP34.13■■■■□ 3.05
MIR3908-201ENST00000579798 FOXD1Q16676 465 aa31.88■■■□□ 2.69
MIR3908-201ENST00000579798 PLPPR3Q6T4P5 718 aa31.54■■■□□ 2.64
MIR3908-201ENST00000579798 PPP6R1Q9UPN7 881 aa30.24■■■□□ 2.43
MIR3908-201ENST00000579798 ADRA2BP18089 450 aa30.2■■■□□ 2.43
MIR3908-201ENST00000579798 PIAS4Q8N2W9 510 aaPredicted RBP29.98■■■□□ 2.39
MIR3908-201ENST00000579798 MSH5O43196 834 aa29.75■■■□□ 2.35
MIR3908-201ENST00000579798 SCAF1Q9H7N4 1312 aaKnown RBP27.92■■■□□ 2.06
MIR3908-201ENST00000579798 POTEDQ86YR6 584 aa27.75■■■□□ 2.03
MIR3908-201ENST00000579798 PPP4R3CPQ6ZMV5 832 aa27.65■■■□□ 2.02
MIR3908-201ENST00000579798 MAPK8IP2Q13387 824 aaPredicted RBP27.5■■□□□ 1.99
MIR3908-201ENST00000579798 DMRT2Q9Y5R5 561 aa27.37■■□□□ 1.97
MIR3908-201ENST00000579798 CNKSR2Q8WXI2 1034 aa27.06■■□□□ 1.92
MIR3908-201ENST00000579798 NCBP3Q53F19 620 aaKnown RBP26.94■■□□□ 1.9
MIR3908-201ENST00000579798 RNF216Q9NWF9 866 aaPredicted RBP26.65■■□□□ 1.86
MIR3908-201ENST00000579798 HOXD11P31277 338 aaPredicted RBP26.64■■□□□ 1.86
MIR3908-201ENST00000579798 KCNA4P22459 653 aa26.4■■□□□ 1.82
MIR3908-201ENST00000579798 NPM3O75607 178 aaKnown RBP26.37■■□□□ 1.81
MIR3908-201ENST00000579798 DCAF8L1A6NGE4 600 aa26.14■■□□□ 1.78
MIR3908-201ENST00000579798 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
MIR3908-201ENST00000579798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.37■■□□□ 1.65
MIR3908-201ENST00000579798 RNF39Q9H2S5 420 aa25.36■■□□□ 1.65
MIR3908-201ENST00000579798 SLC4A1APQ9BWU0 796 aaKnown RBP25.14■■□□□ 1.62
MIR3908-201ENST00000579798 C1QBPQ07021 282 aaKnown RBP25.13■■□□□ 1.61
MIR3908-201ENST00000579798 CACNB1Q02641 598 aaPredicted RBP25.04■■□□□ 1.6
MIR3908-201ENST00000579798 SLC4A2P04920 1241 aa24.98■■□□□ 1.59
MIR3908-201ENST00000579798 U3KPZ7 1027 aaPredicted RBP24.84■■□□□ 1.57
MIR3908-201ENST00000579798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.6■■□□□ 1.53
MIR3908-201ENST00000579798 HNRNPUL2Q1KMD3 747 aaKnown RBP24.6■■□□□ 1.53
MIR3908-201ENST00000579798 FOXD4L1Q9NU39 408 aa24.55■■□□□ 1.52
MIR3908-201ENST00000579798 APLP2Q06481 763 aa24.5■■□□□ 1.51
MIR3908-201ENST00000579798 MYCNP04198 464 aaPredicted RBP24.48■■□□□ 1.51
MIR3908-201ENST00000579798 SAMD1Q6SPF0 538 aaPredicted RBP24.43■■□□□ 1.5
MIR3908-201ENST00000579798 CAPN15O75808 1086 aa24.25■■□□□ 1.47
MIR3908-201ENST00000579798 SPINK5Q9NQ38 1064 aaPredicted RBP24.23■■□□□ 1.47
MIR3908-201ENST00000579798 ZBTB22O15209 634 aa24.22■■□□□ 1.47
MIR3908-201ENST00000579798 ZNF219Q9P2Y4 722 aaPredicted RBP24.12■■□□□ 1.45
MIR3908-201ENST00000579798 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
MIR3908-201ENST00000579798 DSG3P32926 999 aa23.95■■□□□ 1.42
MIR3908-201ENST00000579798 ATXN8OSP0DMR3 200 aa23.85■■□□□ 1.41
MIR3908-201ENST00000579798 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
MIR3908-201ENST00000579798 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
MIR3908-201ENST00000579798 ATF5Q9Y2D1 282 aaPredicted RBP23.65■■□□□ 1.38
MIR3908-201ENST00000579798 ABCB7O75027 752 aa23.64■■□□□ 1.37
MIR3908-201ENST00000579798 POLA2Q14181 598 aa23.52■■□□□ 1.36
MIR3908-201ENST00000579798 ZBTB12Q9Y330 459 aaPredicted RBP23.28■■□□□ 1.32
MIR3908-201ENST00000579798 RBM42Q9BTD8 480 aaKnown RBP22.99■■□□□ 1.27
MIR3908-201ENST00000579798 FBLN2P98095 1184 aa22.93■■□□□ 1.26
MIR3908-201ENST00000579798 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
MIR3908-201ENST00000579798 MKRN4PQ13434 485 aaPredicted RBP22.65■■□□□ 1.22
MIR3908-201ENST00000579798 SPDYE2BA6NHP3 402 aa22.55■■□□□ 1.2
MIR3908-201ENST00000579798 SPDYE6P0CI01 402 aa22.55■■□□□ 1.2
MIR3908-201ENST00000579798 SPDYE2Q495Y8 402 aa22.55■■□□□ 1.2
MIR3908-201ENST00000579798 AKT1S1Q96B36 256 aa22.55■■□□□ 1.2
MIR3908-201ENST00000579798 ZNF692Q9BU19 519 aaPredicted RBP22.32■■□□□ 1.16
MIR3908-201ENST00000579798 SSUH2Q9Y2M2 353 aa22.26■■□□□ 1.15
MIR3908-201ENST00000579798 REM2Q8IYK8 340 aaPredicted RBP22.25■■□□□ 1.15
MIR3908-201ENST00000579798 CHRDL2Q6WN34 429 aa22.1■■□□□ 1.13
MIR3908-201ENST00000579798 SPDYE4A6NLX3 237 aa22.02■■□□□ 1.12
MIR3908-201ENST00000579798 SPDYE1Q8NFV5 336 aaPredicted RBP21.99■■□□□ 1.11
MIR3908-201ENST00000579798 PABPN1Q86U42 306 aaKnown RBP eCLIP21.97■■□□□ 1.11
MIR3908-201ENST00000579798 PITPNM1O00562 1244 aa21.96■■□□□ 1.11
MIR3908-201ENST00000579798 POTEHQ6S545 545 aa21.92■■□□□ 1.1
MIR3908-201ENST00000579798 CLEC11AQ9Y240 323 aa21.8■■□□□ 1.08
MIR3908-201ENST00000579798 FXR2P51116 673 aaKnown RBP eCLIP21.71■■□□□ 1.07
MIR3908-201ENST00000579798 STAG3Q9UJ98 1225 aa21.69■■□□□ 1.06
MIR3908-201ENST00000579798 PIP4P2Q8N4L2 257 aa21.67■■□□□ 1.06
MIR3908-201ENST00000579798 PRR29P0C7W0 189 aa21.61■■□□□ 1.05
MIR3908-201ENST00000579798 PROM2Q8N271 834 aa21.61■■□□□ 1.05
MIR3908-201ENST00000579798 FKBP8Q14318 412 aa21.54■■□□□ 1.04
MIR3908-201ENST00000579798 PRKAR2AP13861 404 aaKnown RBP21.43■■□□□ 1.02
MIR3908-201ENST00000579798 CHADLQ6NUI6 762 aa21.24■□□□□ 0.99
MIR3908-201ENST00000579798 CREBZFQ9NS37 354 aa21.15■□□□□ 0.98
MIR3908-201ENST00000579798 HAX1O00165 279 aa21.14■□□□□ 0.97
MIR3908-201ENST00000579798 FARP1Q9Y4F1 1045 aaPredicted RBP21.11■□□□□ 0.97
MIR3908-201ENST00000579798 FBXO3Q9UK99 471 aa21.1■□□□□ 0.97
MIR3908-201ENST00000579798 PLEKHG5O94827 1062 aa21.02■□□□□ 0.96
MIR3908-201ENST00000579798 C19orf67A6NJJ6 358 aa20.98■□□□□ 0.95
MIR3908-201ENST00000579798 NPM1P06748 294 aaKnown RBP eCLIP20.95■□□□□ 0.94
MIR3908-201ENST00000579798 MIER1Q8N108 512 aa20.94■□□□□ 0.94
MIR3908-201ENST00000579798 SP7Q8TDD2 431 aaPredicted RBP20.88■□□□□ 0.93
MIR3908-201ENST00000579798 MNX1P50219 401 aaPredicted RBP20.87■□□□□ 0.93
MIR3908-201ENST00000579798 PLCD3Q8N3E9 789 aa20.87■□□□□ 0.93
MIR3908-201ENST00000579798 ZBTB47Q9UFB7 747 aaPredicted RBP20.82■□□□□ 0.92
MIR3908-201ENST00000579798 CD44P16070 742 aaKnown RBP20.81■□□□□ 0.92
MIR3908-201ENST00000579798 EVX2Q03828 476 aa20.78■□□□□ 0.92
MIR3908-201ENST00000579798 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
MIR3908-201ENST00000579798 VASPP50552 380 aaPredicted RBP20.68■□□□□ 0.9
MIR3908-201ENST00000579798 CLCN6P51797 869 aa20.66■□□□□ 0.9
MIR3908-201ENST00000579798 ZRANB1Q9UGI0 708 aa20.61■□□□□ 0.89
MIR3908-201ENST00000579798 ZNF579Q8NAF0 562 aaKnown RBP20.56■□□□□ 0.88
MIR3908-201ENST00000579798 GABBR2O75899 941 aa20.47■□□□□ 0.87
MIR3908-201ENST00000579798 KLHL34Q8N239 644 aa20.45■□□□□ 0.86
MIR3908-201ENST00000579798 NUBP1P53384 320 aa20.42■□□□□ 0.86
MIR3908-201ENST00000579798 TSPYL2Q9H2G4 693 aaPredicted RBP20.42■□□□□ 0.86
MIR3908-201ENST00000579798 RASEFQ8IZ41 740 aa20.4■□□□□ 0.86
MIR3908-201ENST00000579798 FAM212AQ96EL1 285 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms