RNA–Protein interactions for RNA: ENST00000579594.1

C18orf54-204, Transcript of chromosome 18 open reading frame 54, humanhuman

TSL 3

Gene C18orf54, Length 389 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C18orf54-204ENST00000579594 AEBP2Q6ZN18 517 aaPredicted RBP31.87■■■□□ 2.69
C18orf54-204ENST00000579594 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
C18orf54-204ENST00000579594 SENP3Q9H4L4 574 aaPredicted RBP27.07■■□□□ 1.92
C18orf54-204ENST00000579594 PHF23Q9BUL5 403 aaPredicted RBP26.98■■□□□ 1.91
C18orf54-204ENST00000579594 FOXD1Q16676 465 aa25.19■■□□□ 1.62
C18orf54-204ENST00000579594 PLPPR3Q6T4P5 718 aa24.76■■□□□ 1.55
C18orf54-204ENST00000579594 PPP6R1Q9UPN7 881 aa23.96■■□□□ 1.43
C18orf54-204ENST00000579594 ADRA2BP18089 450 aa23.91■■□□□ 1.42
C18orf54-204ENST00000579594 PIAS4Q8N2W9 510 aaPredicted RBP23.68■■□□□ 1.38
C18orf54-204ENST00000579594 MSH5O43196 834 aa23.36■■□□□ 1.33
C18orf54-204ENST00000579594 POTEDQ86YR6 584 aa22■■□□□ 1.11
C18orf54-204ENST00000579594 MAPK8IP2Q13387 824 aaPredicted RBP21.83■■□□□ 1.09
C18orf54-204ENST00000579594 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
C18orf54-204ENST00000579594 PPP4R3CPQ6ZMV5 832 aa21.78■■□□□ 1.08
C18orf54-204ENST00000579594 DMRT2Q9Y5R5 561 aa21.54■■□□□ 1.04
C18orf54-204ENST00000579594 CNKSR2Q8WXI2 1034 aa21.23■□□□□ 0.99
C18orf54-204ENST00000579594 NCBP3Q53F19 620 aaKnown RBP21.07■□□□□ 0.96
C18orf54-204ENST00000579594 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
C18orf54-204ENST00000579594 RNF216Q9NWF9 866 aaPredicted RBP20.91■□□□□ 0.94
C18orf54-204ENST00000579594 KCNA4P22459 653 aa20.85■□□□□ 0.93
C18orf54-204ENST00000579594 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
C18orf54-204ENST00000579594 DCAF8L1A6NGE4 600 aa20.71■□□□□ 0.91
C18orf54-204ENST00000579594 DNAJC5BQ9UF47 199 aa20.15■□□□□ 0.82
C18orf54-204ENST00000579594 RNF39Q9H2S5 420 aa20■□□□□ 0.79
C18orf54-204ENST00000579594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.79
C18orf54-204ENST00000579594 CACNB1Q02641 598 aaPredicted RBP19.78■□□□□ 0.76
C18orf54-204ENST00000579594 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
C18orf54-204ENST00000579594 SLC4A2P04920 1241 aa19.73■□□□□ 0.75
C18orf54-204ENST00000579594 C1QBPQ07021 282 aaKnown RBP19.71■□□□□ 0.75
C18orf54-204ENST00000579594 U3KPZ7 1027 aaPredicted RBP19.61■□□□□ 0.73
C18orf54-204ENST00000579594 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
C18orf54-204ENST00000579594 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
C18orf54-204ENST00000579594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
C18orf54-204ENST00000579594 ZBTB22O15209 634 aa19.19■□□□□ 0.66
C18orf54-204ENST00000579594 MYCNP04198 464 aaPredicted RBP19.19■□□□□ 0.66
C18orf54-204ENST00000579594 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
C18orf54-204ENST00000579594 CAPN15O75808 1086 aa19.15■□□□□ 0.66
C18orf54-204ENST00000579594 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
C18orf54-204ENST00000579594 APLP2Q06481 763 aa19.07■□□□□ 0.64
C18orf54-204ENST00000579594 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
C18orf54-204ENST00000579594 ZNF219Q9P2Y4 722 aaPredicted RBP18.9■□□□□ 0.62
C18orf54-204ENST00000579594 DSG3P32926 999 aa18.89■□□□□ 0.61
C18orf54-204ENST00000579594 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
C18orf54-204ENST00000579594 ABCB7O75027 752 aa18.77■□□□□ 0.6
C18orf54-204ENST00000579594 ATF5Q9Y2D1 282 aaPredicted RBP18.77■□□□□ 0.6
C18orf54-204ENST00000579594 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
C18orf54-204ENST00000579594 ATXN8OSP0DMR3 200 aa18.59■□□□□ 0.57
C18orf54-204ENST00000579594 POLA2Q14181 598 aa18.56■□□□□ 0.56
C18orf54-204ENST00000579594 ZBTB12Q9Y330 459 aaPredicted RBP18.17■□□□□ 0.5
C18orf54-204ENST00000579594 RBM42Q9BTD8 480 aaKnown RBP17.99■□□□□ 0.47
C18orf54-204ENST00000579594 FBLN2P98095 1184 aa17.96■□□□□ 0.47
C18orf54-204ENST00000579594 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
C18orf54-204ENST00000579594 MKRN4PQ13434 485 aaPredicted RBP17.91■□□□□ 0.46
C18orf54-204ENST00000579594 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
C18orf54-204ENST00000579594 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
C18orf54-204ENST00000579594 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
C18orf54-204ENST00000579594 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
C18orf54-204ENST00000579594 ZNF692Q9BU19 519 aaPredicted RBP17.57■□□□□ 0.4
C18orf54-204ENST00000579594 REM2Q8IYK8 340 aaPredicted RBP17.54■□□□□ 0.4
C18orf54-204ENST00000579594 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
C18orf54-204ENST00000579594 CHRDL2Q6WN34 429 aa17.44■□□□□ 0.38
C18orf54-204ENST00000579594 PITPNM1O00562 1244 aa17.36■□□□□ 0.37
C18orf54-204ENST00000579594 POTEHQ6S545 545 aa17.34■□□□□ 0.37
C18orf54-204ENST00000579594 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
C18orf54-204ENST00000579594 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
C18orf54-204ENST00000579594 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
C18orf54-204ENST00000579594 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
C18orf54-204ENST00000579594 PIP4P2Q8N4L2 257 aa17.13■□□□□ 0.33
C18orf54-204ENST00000579594 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
C18orf54-204ENST00000579594 PRR29P0C7W0 189 aa17■□□□□ 0.31
C18orf54-204ENST00000579594 FKBP8Q14318 412 aa16.98■□□□□ 0.31
C18orf54-204ENST00000579594 PROM2Q8N271 834 aa16.93■□□□□ 0.3
C18orf54-204ENST00000579594 PRKAR2AP13861 404 aaKnown RBP16.92■□□□□ 0.3
C18orf54-204ENST00000579594 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
C18orf54-204ENST00000579594 CHADLQ6NUI6 762 aa16.87■□□□□ 0.29
C18orf54-204ENST00000579594 HAX1O00165 279 aa16.7■□□□□ 0.26
C18orf54-204ENST00000579594 CREBZFQ9NS37 354 aa16.68■□□□□ 0.26
C18orf54-204ENST00000579594 FARP1Q9Y4F1 1045 aaPredicted RBP16.63■□□□□ 0.25
C18orf54-204ENST00000579594 EVX2Q03828 476 aa16.54■□□□□ 0.24
C18orf54-204ENST00000579594 C19orf67A6NJJ6 358 aa16.51■□□□□ 0.23
C18orf54-204ENST00000579594 SP7Q8TDD2 431 aaPredicted RBP16.48■□□□□ 0.23
C18orf54-204ENST00000579594 MIER1Q8N108 512 aa16.47■□□□□ 0.23
C18orf54-204ENST00000579594 MNX1P50219 401 aaPredicted RBP16.45■□□□□ 0.22
C18orf54-204ENST00000579594 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
C18orf54-204ENST00000579594 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
C18orf54-204ENST00000579594 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
C18orf54-204ENST00000579594 PLEKHG5O94827 1062 aa16.39■□□□□ 0.21
C18orf54-204ENST00000579594 NPM1P06748 294 aaKnown RBP eCLIP16.38■□□□□ 0.21
C18orf54-204ENST00000579594 ZRANB1Q9UGI0 708 aa16.27■□□□□ 0.2
C18orf54-204ENST00000579594 VASPP50552 380 aaPredicted RBP16.25■□□□□ 0.19
C18orf54-204ENST00000579594 PAK3O75914 559 aaPredicted RBP16.22■□□□□ 0.19
C18orf54-204ENST00000579594 ZBTB47Q9UFB7 747 aaPredicted RBP16.2■□□□□ 0.18
C18orf54-204ENST00000579594 GABBR2O75899 941 aa16.17■□□□□ 0.18
C18orf54-204ENST00000579594 ZNF579Q8NAF0 562 aaKnown RBP16.16■□□□□ 0.18
C18orf54-204ENST00000579594 TSPYL2Q9H2G4 693 aaPredicted RBP16.15■□□□□ 0.18
C18orf54-204ENST00000579594 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
C18orf54-204ENST00000579594 PHF12Q96QT6 1004 aa16.1■□□□□ 0.17
C18orf54-204ENST00000579594 KLHL34Q8N239 644 aa16.08■□□□□ 0.16
C18orf54-204ENST00000579594 NUBP1P53384 320 aa16.07■□□□□ 0.16
C18orf54-204ENST00000579594 CLCN6P51797 869 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms