RNA–Protein interactions for RNA: ENST00000579385.1

AP001099.1-201, humanhuman

TSL 5 BASIC

Gene AP001099.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001099.1-201ENST00000579385 AEBP2Q6ZN18 517 aaPredicted RBP31.53■■■□□ 2.64
AP001099.1-201ENST00000579385 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
AP001099.1-201ENST00000579385 PHF23Q9BUL5 403 aaPredicted RBP27.59■■■□□ 2.01
AP001099.1-201ENST00000579385 SENP3Q9H4L4 574 aaPredicted RBP26.71■■□□□ 1.87
AP001099.1-201ENST00000579385 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
AP001099.1-201ENST00000579385 FOXD1Q16676 465 aa24.71■■□□□ 1.55
AP001099.1-201ENST00000579385 ADRA2BP18089 450 aa24.21■■□□□ 1.47
AP001099.1-201ENST00000579385 PPP6R1Q9UPN7 881 aa24.18■■□□□ 1.46
AP001099.1-201ENST00000579385 NISCHQ9Y2I1 1504 aa23.71■■□□□ 1.39
AP001099.1-201ENST00000579385 PIAS4Q8N2W9 510 aaPredicted RBP23.45■■□□□ 1.34
AP001099.1-201ENST00000579385 KCNA4P22459 653 aa22.75■■□□□ 1.23
AP001099.1-201ENST00000579385 PPP4R3CPQ6ZMV5 832 aa22.71■■□□□ 1.23
AP001099.1-201ENST00000579385 MSH5O43196 834 aa22.61■■□□□ 1.21
AP001099.1-201ENST00000579385 NCBP3Q53F19 620 aaKnown RBP22.3■■□□□ 1.16
AP001099.1-201ENST00000579385 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
AP001099.1-201ENST00000579385 CNKSR2Q8WXI2 1034 aa21.96■■□□□ 1.11
AP001099.1-201ENST00000579385 NPM3O75607 178 aaKnown RBP21.92■■□□□ 1.1
AP001099.1-201ENST00000579385 MAPK8IP2Q13387 824 aaPredicted RBP21.81■■□□□ 1.08
AP001099.1-201ENST00000579385 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
AP001099.1-201ENST00000579385 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
AP001099.1-201ENST00000579385 RNF216Q9NWF9 866 aaPredicted RBP21.39■■□□□ 1.01
AP001099.1-201ENST00000579385 DMRT2Q9Y5R5 561 aa21.39■■□□□ 1.01
AP001099.1-201ENST00000579385 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
AP001099.1-201ENST00000579385 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
AP001099.1-201ENST00000579385 HOXD11P31277 338 aaPredicted RBP21.16■□□□□ 0.98
AP001099.1-201ENST00000579385 ZBTB22O15209 634 aa20.91■□□□□ 0.94
AP001099.1-201ENST00000579385 FOXD4L1Q9NU39 408 aa20.8■□□□□ 0.92
AP001099.1-201ENST00000579385 CCDC180Q9P1Z9 1646 aa20.78■□□□□ 0.92
AP001099.1-201ENST00000579385 SLC4A2P04920 1241 aa20.56■□□□□ 0.88
AP001099.1-201ENST00000579385 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
AP001099.1-201ENST00000579385 MYCNP04198 464 aaPredicted RBP20.26■□□□□ 0.83
AP001099.1-201ENST00000579385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
AP001099.1-201ENST00000579385 ATXN8OSP0DMR3 200 aa20.04■□□□□ 0.8
AP001099.1-201ENST00000579385 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
AP001099.1-201ENST00000579385 U3KPZ7 1027 aaPredicted RBP19.88■□□□□ 0.77
AP001099.1-201ENST00000579385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
AP001099.1-201ENST00000579385 HNRNPUL2Q1KMD3 747 aaKnown RBP19.87■□□□□ 0.77
AP001099.1-201ENST00000579385 SAMD1Q6SPF0 538 aaPredicted RBP19.81■□□□□ 0.76
AP001099.1-201ENST00000579385 ABCC9O60706 1549 aa19.76■□□□□ 0.75
AP001099.1-201ENST00000579385 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
AP001099.1-201ENST00000579385 ATF5Q9Y2D1 282 aaPredicted RBP19.65■□□□□ 0.74
AP001099.1-201ENST00000579385 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
AP001099.1-201ENST00000579385 APLP2Q06481 763 aa19.56■□□□□ 0.72
AP001099.1-201ENST00000579385 MYO15BQ96JP2 1530 aa19.48■□□□□ 0.71
AP001099.1-201ENST00000579385 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
AP001099.1-201ENST00000579385 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
AP001099.1-201ENST00000579385 NACADO15069 1562 aa19.38■□□□□ 0.69
AP001099.1-201ENST00000579385 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
AP001099.1-201ENST00000579385 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
AP001099.1-201ENST00000579385 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
AP001099.1-201ENST00000579385 FKBP8Q14318 412 aa19.2■□□□□ 0.66
AP001099.1-201ENST00000579385 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
AP001099.1-201ENST00000579385 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
AP001099.1-201ENST00000579385 SHROOM4Q9ULL8 1493 aa19.13■□□□□ 0.65
AP001099.1-201ENST00000579385 CAPN15O75808 1086 aa19.12■□□□□ 0.65
AP001099.1-201ENST00000579385 SCRIBQ14160 1630 aa19.05■□□□□ 0.64
AP001099.1-201ENST00000579385 POLA2Q14181 598 aa18.97■□□□□ 0.63
AP001099.1-201ENST00000579385 FBLN2P98095 1184 aa18.85■□□□□ 0.61
AP001099.1-201ENST00000579385 MKRN4PQ13434 485 aaPredicted RBP18.82■□□□□ 0.6
AP001099.1-201ENST00000579385 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
AP001099.1-201ENST00000579385 ABCB7O75027 752 aa18.79■□□□□ 0.6
AP001099.1-201ENST00000579385 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
AP001099.1-201ENST00000579385 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
AP001099.1-201ENST00000579385 SPDYE4A6NLX3 237 aa18.69■□□□□ 0.58
AP001099.1-201ENST00000579385 DSG3P32926 999 aa18.65■□□□□ 0.58
AP001099.1-201ENST00000579385 CACNB1Q02641 598 aaPredicted RBP18.56■□□□□ 0.56
AP001099.1-201ENST00000579385 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
AP001099.1-201ENST00000579385 CECR2Q9BXF3 1484 aa18.43■□□□□ 0.54
AP001099.1-201ENST00000579385 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
AP001099.1-201ENST00000579385 PROM2Q8N271 834 aa18.41■□□□□ 0.54
AP001099.1-201ENST00000579385 FBXO3Q9UK99 471 aa18.41■□□□□ 0.54
AP001099.1-201ENST00000579385 RTN4Q9NQC3 1192 aaKnown RBP18.36■□□□□ 0.53
AP001099.1-201ENST00000579385 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
AP001099.1-201ENST00000579385 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
AP001099.1-201ENST00000579385 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
AP001099.1-201ENST00000579385 SMARCA4P51532 1647 aa18.27■□□□□ 0.51
AP001099.1-201ENST00000579385 SUPT5HO00267 1087 aaKnown RBP18.26■□□□□ 0.51
AP001099.1-201ENST00000579385 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
AP001099.1-201ENST00000579385 ZNF692Q9BU19 519 aaPredicted RBP18.25■□□□□ 0.51
AP001099.1-201ENST00000579385 SPDYE2BA6NHP3 402 aa18.22■□□□□ 0.51
AP001099.1-201ENST00000579385 SPDYE6P0CI01 402 aa18.22■□□□□ 0.51
AP001099.1-201ENST00000579385 SPDYE2Q495Y8 402 aa18.22■□□□□ 0.51
AP001099.1-201ENST00000579385 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
AP001099.1-201ENST00000579385 SSUH2Q9Y2M2 353 aa18.11■□□□□ 0.49
AP001099.1-201ENST00000579385 WIZO95785 1651 aa18.11■□□□□ 0.49
AP001099.1-201ENST00000579385 VASPP50552 380 aaPredicted RBP18.1■□□□□ 0.49
AP001099.1-201ENST00000579385 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.48
AP001099.1-201ENST00000579385 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
AP001099.1-201ENST00000579385 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
AP001099.1-201ENST00000579385 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
AP001099.1-201ENST00000579385 STAG3Q9UJ98 1225 aa17.92■□□□□ 0.46
AP001099.1-201ENST00000579385 IFNLR1Q8IU57 520 aaPredicted RBP17.89■□□□□ 0.45
AP001099.1-201ENST00000579385 NCAPD3P42695 1498 aa17.88■□□□□ 0.45
AP001099.1-201ENST00000579385 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
AP001099.1-201ENST00000579385 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
AP001099.1-201ENST00000579385 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
AP001099.1-201ENST00000579385 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
AP001099.1-201ENST00000579385 CCDC88BA6NC98 1476 aa17.75■□□□□ 0.43
AP001099.1-201ENST00000579385 KLHL34Q8N239 644 aa17.73■□□□□ 0.43
AP001099.1-201ENST00000579385 PLCD3Q8N3E9 789 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms