RNA–Protein interactions for RNA: ENST00000579173.1

BPTF-212, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 2

Gene BPTF, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-212ENST00000579173 AEBP2Q6ZN18 517 aaPredicted RBP33.12■■■□□ 2.89
BPTF-212ENST00000579173 CHIC1Q5VXU3 224 aa31.59■■■□□ 2.65
BPTF-212ENST00000579173 SENP3Q9H4L4 574 aaPredicted RBP28.11■■■□□ 2.09
BPTF-212ENST00000579173 PHF23Q9BUL5 403 aaPredicted RBP27.84■■■□□ 2.05
BPTF-212ENST00000579173 FOXD1Q16676 465 aa26.27■■□□□ 1.8
BPTF-212ENST00000579173 PLPPR3Q6T4P5 718 aa25.33■■□□□ 1.65
BPTF-212ENST00000579173 PPP6R1Q9UPN7 881 aa24.77■■□□□ 1.56
BPTF-212ENST00000579173 ADRA2BP18089 450 aa24.74■■□□□ 1.55
BPTF-212ENST00000579173 PIAS4Q8N2W9 510 aaPredicted RBP24.64■■□□□ 1.54
BPTF-212ENST00000579173 MSH5O43196 834 aa24.39■■□□□ 1.49
BPTF-212ENST00000579173 POTEDQ86YR6 584 aa23.52■■□□□ 1.36
BPTF-212ENST00000579173 MAPK8IP2Q13387 824 aaPredicted RBP22.67■■□□□ 1.22
BPTF-212ENST00000579173 SCAF1Q9H7N4 1312 aaKnown RBP22.46■■□□□ 1.19
BPTF-212ENST00000579173 DMRT2Q9Y5R5 561 aa22.34■■□□□ 1.17
BPTF-212ENST00000579173 PPP4R3CPQ6ZMV5 832 aa22.3■■□□□ 1.16
BPTF-212ENST00000579173 CNKSR2Q8WXI2 1034 aa21.76■■□□□ 1.07
BPTF-212ENST00000579173 DCAF8L1A6NGE4 600 aa21.62■■□□□ 1.05
BPTF-212ENST00000579173 HOXD11P31277 338 aaPredicted RBP21.56■■□□□ 1.04
BPTF-212ENST00000579173 RNF216Q9NWF9 866 aaPredicted RBP21.47■■□□□ 1.03
BPTF-212ENST00000579173 NCBP3Q53F19 620 aaKnown RBP21.43■■□□□ 1.02
BPTF-212ENST00000579173 NPM3O75607 178 aaKnown RBP21.22■□□□□ 0.99
BPTF-212ENST00000579173 KCNA4P22459 653 aa21.06■□□□□ 0.96
BPTF-212ENST00000579173 CACNB1Q02641 598 aaPredicted RBP20.9■□□□□ 0.94
BPTF-212ENST00000579173 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
BPTF-212ENST00000579173 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.68■□□□□ 0.97e-9■■□□□ 12.4
BPTF-212ENST00000579173 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
BPTF-212ENST00000579173 C1QBPQ07021 282 aaKnown RBP20.51■□□□□ 0.87
BPTF-212ENST00000579173 U3KPZ7 1027 aaPredicted RBP20.25■□□□□ 0.83
BPTF-212ENST00000579173 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
BPTF-212ENST00000579173 SPINK5Q9NQ38 1064 aaPredicted RBP19.96■□□□□ 0.79
BPTF-212ENST00000579173 CAPN15O75808 1086 aa19.91■□□□□ 0.78
BPTF-212ENST00000579173 SLC4A1APQ9BWU0 796 aaKnown RBP19.9■□□□□ 0.78
BPTF-212ENST00000579173 TRHP20396 242 aaPredicted RBP19.67■□□□□ 0.74
BPTF-212ENST00000579173 DSG3P32926 999 aa19.65■□□□□ 0.74
BPTF-212ENST00000579173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
BPTF-212ENST00000579173 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
BPTF-212ENST00000579173 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
BPTF-212ENST00000579173 APLP2Q06481 763 aa19.57■□□□□ 0.72
BPTF-212ENST00000579173 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
BPTF-212ENST00000579173 ABCB7O75027 752 aa19.53■□□□□ 0.72
BPTF-212ENST00000579173 FOXD4L1Q9NU39 408 aa19.5■□□□□ 0.71
BPTF-212ENST00000579173 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
BPTF-212ENST00000579173 ZBTB22O15209 634 aa19.38■□□□□ 0.69
BPTF-212ENST00000579173 ATF5Q9Y2D1 282 aaPredicted RBP19.22■□□□□ 0.67
BPTF-212ENST00000579173 POLA2Q14181 598 aa19.13■□□□□ 0.65
BPTF-212ENST00000579173 ATXN8OSP0DMR3 200 aa18.76■□□□□ 0.59
BPTF-212ENST00000579173 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
BPTF-212ENST00000579173 RBM42Q9BTD8 480 aaKnown RBP18.67■□□□□ 0.58
BPTF-212ENST00000579173 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
BPTF-212ENST00000579173 ZBTB12Q9Y330 459 aaPredicted RBP18.62■□□□□ 0.57
BPTF-212ENST00000579173 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
BPTF-212ENST00000579173 POTEHQ6S545 545 aa18.47■□□□□ 0.55
BPTF-212ENST00000579173 FBLN2P98095 1184 aa18.35■□□□□ 0.53
BPTF-212ENST00000579173 AKT1S1Q96B36 256 aa18.3■□□□□ 0.52
BPTF-212ENST00000579173 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
BPTF-212ENST00000579173 CHRDL2Q6WN34 429 aa18.25■□□□□ 0.51
BPTF-212ENST00000579173 REM2Q8IYK8 340 aaPredicted RBP18.19■□□□□ 0.5
BPTF-212ENST00000579173 SPDYE2BA6NHP3 402 aa18.1■□□□□ 0.49
BPTF-212ENST00000579173 SPDYE6P0CI01 402 aa18.1■□□□□ 0.49
BPTF-212ENST00000579173 SPDYE2Q495Y8 402 aa18.1■□□□□ 0.49
BPTF-212ENST00000579173 PITPNM1O00562 1244 aa18.04■□□□□ 0.48
BPTF-212ENST00000579173 ZNF692Q9BU19 519 aaPredicted RBP18.01■□□□□ 0.47
BPTF-212ENST00000579173 PIP4P2Q8N4L2 257 aa17.89■□□□□ 0.45
BPTF-212ENST00000579173 SSUH2Q9Y2M2 353 aa17.89■□□□□ 0.45
BPTF-212ENST00000579173 CLEC11AQ9Y240 323 aa17.87■□□□□ 0.45
BPTF-212ENST00000579173 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
BPTF-212ENST00000579173 SPDYE1Q8NFV5 336 aaPredicted RBP17.75■□□□□ 0.43
BPTF-212ENST00000579173 FXR2P51116 673 aaKnown RBP eCLIP17.74■□□□□ 0.436e-7■□□□□ 10
BPTF-212ENST00000579173 PRKAR2AP13861 404 aaKnown RBP17.59■□□□□ 0.41
BPTF-212ENST00000579173 SPDYE4A6NLX3 237 aa17.54■□□□□ 0.4
BPTF-212ENST00000579173 HAX1O00165 279 aa17.54■□□□□ 0.4
BPTF-212ENST00000579173 CHADLQ6NUI6 762 aa17.52■□□□□ 0.4
BPTF-212ENST00000579173 PRR29P0C7W0 189 aa17.51■□□□□ 0.39
BPTF-212ENST00000579173 SP7Q8TDD2 431 aaPredicted RBP17.4■□□□□ 0.38
BPTF-212ENST00000579173 EVX2Q03828 476 aa17.36■□□□□ 0.37
BPTF-212ENST00000579173 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
BPTF-212ENST00000579173 C19orf67A6NJJ6 358 aa17.18■□□□□ 0.34
BPTF-212ENST00000579173 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
BPTF-212ENST00000579173 CREBZFQ9NS37 354 aa17.12■□□□□ 0.33
BPTF-212ENST00000579173 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
BPTF-212ENST00000579173 PROM2Q8N271 834 aa17.02■□□□□ 0.32
BPTF-212ENST00000579173 FKBP8Q14318 412 aa16.97■□□□□ 0.31
BPTF-212ENST00000579173 GABBR2O75899 941 aa16.92■□□□□ 0.3
BPTF-212ENST00000579173 ZRANB1Q9UGI0 708 aa16.85■□□□□ 0.29
BPTF-212ENST00000579173 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
BPTF-212ENST00000579173 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
BPTF-212ENST00000579173 MIER1Q8N108 512 aa16.74■□□□□ 0.27
BPTF-212ENST00000579173 PAK3O75914 559 aaPredicted RBP16.7■□□□□ 0.26
BPTF-212ENST00000579173 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
BPTF-212ENST00000579173 PHF12Q96QT6 1004 aa16.67■□□□□ 0.26
BPTF-212ENST00000579173 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
BPTF-212ENST00000579173 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
BPTF-212ENST00000579173 TSPYL2Q9H2G4 693 aaPredicted RBP16.62■□□□□ 0.25
BPTF-212ENST00000579173 GALR2O43603 387 aaPredicted RBP16.59■□□□□ 0.25
BPTF-212ENST00000579173 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
BPTF-212ENST00000579173 DCBLD2Q96PD2 775 aa16.53■□□□□ 0.24
BPTF-212ENST00000579173 CLCN6P51797 869 aa16.5■□□□□ 0.23
BPTF-212ENST00000579173 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
BPTF-212ENST00000579173 MS4A3Q96HJ5 214 aa16.43■□□□□ 0.22
BPTF-212ENST00000579173 CCDC61Q9Y6R9 512 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms