RNA–Protein interactions for RNA: ENST00000578386.5

SMURF2-203, Transcript of SMAD specific E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene SMURF2, Length 3,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF2-203ENST00000578386 NISCHQ9Y2I1 1504 aa22.81■■□□□ 1.24
SMURF2-203ENST00000578386 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
SMURF2-203ENST00000578386 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
SMURF2-203ENST00000578386 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
SMURF2-203ENST00000578386 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
SMURF2-203ENST00000578386 DCAF1Q9Y4B6 1507 aa18.8■□□□□ 0.6
SMURF2-203ENST00000578386 ABCC9O60706 1549 aa18.63■□□□□ 0.57
SMURF2-203ENST00000578386 SUPT5HO00267 1087 aaKnown RBP18.52■□□□□ 0.55
SMURF2-203ENST00000578386 MYO15BQ96JP2 1530 aa18.5■□□□□ 0.55
SMURF2-203ENST00000578386 NACADO15069 1562 aa18.35■□□□□ 0.53
SMURF2-203ENST00000578386 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
SMURF2-203ENST00000578386 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
SMURF2-203ENST00000578386 UNC13AQ9UPW8 1703 aa17.96■□□□□ 0.47
SMURF2-203ENST00000578386 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
SMURF2-203ENST00000578386 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
SMURF2-203ENST00000578386 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMURF2-203ENST00000578386 BICRAQ9NZM4 1560 aa17.73■□□□□ 0.43
SMURF2-203ENST00000578386 MROH2BQ7Z745 1585 aa17.68■□□□□ 0.42
SMURF2-203ENST00000578386 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
SMURF2-203ENST00000578386 WIZO95785 1651 aa17.57■□□□□ 0.4
SMURF2-203ENST00000578386 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
SMURF2-203ENST00000578386 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
SMURF2-203ENST00000578386 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
SMURF2-203ENST00000578386 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
SMURF2-203ENST00000578386 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.34
SMURF2-203ENST00000578386 TRIM41Q8WV44 630 aa17.21■□□□□ 0.34
SMURF2-203ENST00000578386 SMARCA2P51531 1590 aa17.19■□□□□ 0.34
SMURF2-203ENST00000578386 FAM9AQ8IZU1 332 aaPredicted RBP17.17■□□□□ 0.34
SMURF2-203ENST00000578386 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
SMURF2-203ENST00000578386 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
SMURF2-203ENST00000578386 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
SMURF2-203ENST00000578386 EHMT2Q96KQ7 1210 aa17.14■□□□□ 0.33
SMURF2-203ENST00000578386 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
SMURF2-203ENST00000578386 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
SMURF2-203ENST00000578386 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
SMURF2-203ENST00000578386 HMGXB3Q12766 1538 aa16.95■□□□□ 0.3
SMURF2-203ENST00000578386 CC2D2AQ9P2K1 1620 aa16.85■□□□□ 0.29
SMURF2-203ENST00000578386 SOGA1O94964 1423 aa16.71■□□□□ 0.27
SMURF2-203ENST00000578386 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
SMURF2-203ENST00000578386 WRNQ14191 1432 aaPredicted RBP eCLIP16.69■□□□□ 0.26
SMURF2-203ENST00000578386 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
SMURF2-203ENST00000578386 CFTRP13569 1480 aa16.65■□□□□ 0.26
SMURF2-203ENST00000578386 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
SMURF2-203ENST00000578386 DNAJC5BQ9UF47 199 aa16.61■□□□□ 0.25
SMURF2-203ENST00000578386 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
SMURF2-203ENST00000578386 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
SMURF2-203ENST00000578386 PPARGC1BQ86YN6 1023 aaKnown RBP16.55■□□□□ 0.24
SMURF2-203ENST00000578386 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
SMURF2-203ENST00000578386 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
SMURF2-203ENST00000578386 CADPSQ9ULU8 1353 aa16.53■□□□□ 0.24
SMURF2-203ENST00000578386 CUX1P39880 1505 aa16.51■□□□□ 0.23
SMURF2-203ENST00000578386 UBTFP17480 764 aaKnown RBP16.5■□□□□ 0.23
SMURF2-203ENST00000578386 EEA1Q15075 1411 aa16.45■□□□□ 0.22
SMURF2-203ENST00000578386 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
SMURF2-203ENST00000578386 NESP48681 1621 aa16.44■□□□□ 0.22
SMURF2-203ENST00000578386 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
SMURF2-203ENST00000578386 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
SMURF2-203ENST00000578386 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
SMURF2-203ENST00000578386 CEP162Q5TB80 1403 aa16.33■□□□□ 0.2
SMURF2-203ENST00000578386 TRIM26Q12899 539 aaPredicted RBP16.32■□□□□ 0.2
SMURF2-203ENST00000578386 KIF21BO75037 1637 aa16.32■□□□□ 0.2
SMURF2-203ENST00000578386 GOLGA3Q08378 1498 aa16.3■□□□□ 0.2
SMURF2-203ENST00000578386 RAPGEF2Q9Y4G8 1499 aa16.3■□□□□ 0.2
SMURF2-203ENST00000578386 TNIKQ9UKE5 1360 aa16.29■□□□□ 0.2
SMURF2-203ENST00000578386 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
SMURF2-203ENST00000578386 CEP164Q9UPV0 1460 aa16.27■□□□□ 0.2
SMURF2-203ENST00000578386 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
SMURF2-203ENST00000578386 KIF21AQ7Z4S6 1674 aa16.24■□□□□ 0.19
SMURF2-203ENST00000578386 TOPBP1Q92547 1522 aa16.23■□□□□ 0.19
SMURF2-203ENST00000578386 URB2Q14146 1524 aaKnown RBP16.21■□□□□ 0.19
SMURF2-203ENST00000578386 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
SMURF2-203ENST00000578386 CUX2O14529 1486 aa16.21■□□□□ 0.19
SMURF2-203ENST00000578386 PRXQ9BXM0 1461 aa16.21■□□□□ 0.18
SMURF2-203ENST00000578386 RAD54L2Q9Y4B4 1467 aa16.18■□□□□ 0.18
SMURF2-203ENST00000578386 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
SMURF2-203ENST00000578386 PDS5BQ9NTI5 1447 aa16.18■□□□□ 0.18
SMURF2-203ENST00000578386 ERICH3Q5RHP9 1530 aa16.16■□□□□ 0.18
SMURF2-203ENST00000578386 HRCP23327 699 aa16.15■□□□□ 0.18
SMURF2-203ENST00000578386 CLIP1P30622 1438 aa16.14■□□□□ 0.17
SMURF2-203ENST00000578386 IGF1RP08069 1367 aa16.11■□□□□ 0.17
SMURF2-203ENST00000578386 ABCA10Q8WWZ4 1543 aa16.11■□□□□ 0.17
SMURF2-203ENST00000578386 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
SMURF2-203ENST00000578386 TDRD9Q8NDG6 1382 aaKnown RBP16.05■□□□□ 0.16
SMURF2-203ENST00000578386 CARMIL1Q5VZK9 1371 aa16.03■□□□□ 0.16
SMURF2-203ENST00000578386 TARBP1Q13395 1621 aaKnown RBP16.01■□□□□ 0.15
SMURF2-203ENST00000578386 ABCA5Q8WWZ7 1642 aa16.01■□□□□ 0.15
SMURF2-203ENST00000578386 MRC2Q9UBG0 1479 aa16■□□□□ 0.15
SMURF2-203ENST00000578386 P3H3Q8IVL6 736 aa15.99■□□□□ 0.15
SMURF2-203ENST00000578386 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
SMURF2-203ENST00000578386 APLP2Q06481 763 aa15.96■□□□□ 0.14
SMURF2-203ENST00000578386 WDR62O43379 1518 aa15.95■□□□□ 0.14
SMURF2-203ENST00000578386 CUL7Q14999 1698 aa15.94■□□□□ 0.14
SMURF2-203ENST00000578386 ARAP1Q96P48 1450 aa15.94■□□□□ 0.14
SMURF2-203ENST00000578386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.92■□□□□ 0.14
SMURF2-203ENST00000578386 GAPVD1Q14C86 1478 aa15.92■□□□□ 0.14
SMURF2-203ENST00000578386 THOC2Q8NI27 1593 aaKnown RBP15.9■□□□□ 0.14
SMURF2-203ENST00000578386 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
SMURF2-203ENST00000578386 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■■■■ 30.3
SMURF2-203ENST00000578386 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
SMURF2-203ENST00000578386 ATP1B4Q9UN42 357 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms