RNA–Protein interactions for RNA: ENST00000577473.1

MIR4643-201, Transcript of microRNA 4643, humanhuman

BASIC

Gene MIR4643, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4643-201ENST00000577473 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
MIR4643-201ENST00000577473 CHIC1Q5VXU3 224 aa16.2■□□□□ 0.18
MIR4643-201ENST00000577473 SENP3Q9H4L4 574 aaPredicted RBP14.79□□□□□ -0.04
MIR4643-201ENST00000577473 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
MIR4643-201ENST00000577473 FOXD1Q16676 465 aa13.74□□□□□ -0.21
MIR4643-201ENST00000577473 MSH5O43196 834 aa13.03□□□□□ -0.32
MIR4643-201ENST00000577473 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
MIR4643-201ENST00000577473 PLPPR3Q6T4P5 718 aa12.91□□□□□ -0.34
MIR4643-201ENST00000577473 PIAS4Q8N2W9 510 aaPredicted RBP12.87□□□□□ -0.35
MIR4643-201ENST00000577473 ADRA2BP18089 450 aa12.67□□□□□ -0.38
MIR4643-201ENST00000577473 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
MIR4643-201ENST00000577473 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
MIR4643-201ENST00000577473 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
MIR4643-201ENST00000577473 DMRT2Q9Y5R5 561 aa11.65□□□□□ -0.54
MIR4643-201ENST00000577473 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
MIR4643-201ENST00000577473 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
MIR4643-201ENST00000577473 PPP4R3CPQ6ZMV5 832 aa11.27□□□□□ -0.61
MIR4643-201ENST00000577473 HOXD11P31277 338 aaPredicted RBP11.13□□□□□ -0.63
MIR4643-201ENST00000577473 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
MIR4643-201ENST00000577473 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
MIR4643-201ENST00000577473 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
MIR4643-201ENST00000577473 C1QBPQ07021 282 aaKnown RBP10.92□□□□□ -0.66
MIR4643-201ENST00000577473 NCBP3Q53F19 620 aaKnown RBP10.87□□□□□ -0.67
MIR4643-201ENST00000577473 DNAJC5BQ9UF47 199 aa10.79□□□□□ -0.68
MIR4643-201ENST00000577473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
MIR4643-201ENST00000577473 NPM3O75607 178 aaKnown RBP10.57□□□□□ -0.72
MIR4643-201ENST00000577473 CAPN15O75808 1086 aa10.39□□□□□ -0.75
MIR4643-201ENST00000577473 U3KPZ7 1027 aaPredicted RBP10.35□□□□□ -0.75
MIR4643-201ENST00000577473 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
MIR4643-201ENST00000577473 DSG3P32926 999 aa10.26□□□□□ -0.77
MIR4643-201ENST00000577473 APLP2Q06481 763 aa10.24□□□□□ -0.77
MIR4643-201ENST00000577473 KCNA4P22459 653 aa10.19□□□□□ -0.78
MIR4643-201ENST00000577473 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
MIR4643-201ENST00000577473 POTEHQ6S545 545 aa10.17□□□□□ -0.78
MIR4643-201ENST00000577473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.15□□□□□ -0.78
MIR4643-201ENST00000577473 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
MIR4643-201ENST00000577473 ZNF219Q9P2Y4 722 aaPredicted RBP10.13□□□□□ -0.79
MIR4643-201ENST00000577473 SLC4A2P04920 1241 aa10.1□□□□□ -0.79
MIR4643-201ENST00000577473 ABCB7O75027 752 aa10.08□□□□□ -0.8
MIR4643-201ENST00000577473 SAMD1Q6SPF0 538 aaPredicted RBP10.04□□□□□ -0.8
MIR4643-201ENST00000577473 RBM42Q9BTD8 480 aaKnown RBP9.91□□□□□ -0.82
MIR4643-201ENST00000577473 MYCNP04198 464 aaPredicted RBP9.84□□□□□ -0.83
MIR4643-201ENST00000577473 POLA2Q14181 598 aa9.82□□□□□ -0.84
MIR4643-201ENST00000577473 CHRDL2Q6WN34 429 aa9.7□□□□□ -0.86
MIR4643-201ENST00000577473 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
MIR4643-201ENST00000577473 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
MIR4643-201ENST00000577473 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
MIR4643-201ENST00000577473 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
MIR4643-201ENST00000577473 ATF5Q9Y2D1 282 aaPredicted RBP9.54□□□□□ -0.88
MIR4643-201ENST00000577473 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
MIR4643-201ENST00000577473 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
MIR4643-201ENST00000577473 SP7Q8TDD2 431 aaPredicted RBP9.44□□□□□ -0.9
MIR4643-201ENST00000577473 HAX1O00165 279 aa9.4□□□□□ -0.9
MIR4643-201ENST00000577473 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
MIR4643-201ENST00000577473 FBLN2P98095 1184 aa9.36□□□□□ -0.91
MIR4643-201ENST00000577473 PITPNM1O00562 1244 aa9.35□□□□□ -0.91
MIR4643-201ENST00000577473 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
MIR4643-201ENST00000577473 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
MIR4643-201ENST00000577473 SPDYE2BA6NHP3 402 aa9.29□□□□□ -0.92
MIR4643-201ENST00000577473 SPDYE6P0CI01 402 aa9.29□□□□□ -0.92
MIR4643-201ENST00000577473 SPDYE2Q495Y8 402 aa9.29□□□□□ -0.92
MIR4643-201ENST00000577473 ZBTB22O15209 634 aa9.28□□□□□ -0.92
MIR4643-201ENST00000577473 CLEC11AQ9Y240 323 aa9.25□□□□□ -0.93
MIR4643-201ENST00000577473 SPDYE1Q8NFV5 336 aaPredicted RBP9.21□□□□□ -0.94
MIR4643-201ENST00000577473 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
MIR4643-201ENST00000577473 PRKAR2AP13861 404 aaKnown RBP9.17□□□□□ -0.94
MIR4643-201ENST00000577473 EVX2Q03828 476 aa9.1□□□□□ -0.95
MIR4643-201ENST00000577473 MKRN4PQ13434 485 aaPredicted RBP9.07□□□□□ -0.96
MIR4643-201ENST00000577473 PRR29P0C7W0 189 aa9.06□□□□□ -0.96
MIR4643-201ENST00000577473 SSUH2Q9Y2M2 353 aa9.06□□□□□ -0.96
MIR4643-201ENST00000577473 C19orf67A6NJJ6 358 aa9.01□□□□□ -0.97
MIR4643-201ENST00000577473 PABPN1Q86U42 306 aaKnown RBP eCLIP9.01□□□□□ -0.97
MIR4643-201ENST00000577473 CHADLQ6NUI6 762 aa9□□□□□ -0.97
MIR4643-201ENST00000577473 GABBR2O75899 941 aa8.97□□□□□ -0.97
MIR4643-201ENST00000577473 LHX8Q68G74 356 aa8.89□□□□□ -0.99
MIR4643-201ENST00000577473 CD44P16070 742 aaKnown RBP8.87□□□□□ -0.99
MIR4643-201ENST00000577473 FARP1Q9Y4F1 1045 aaPredicted RBP8.85□□□□□ -0.99
MIR4643-201ENST00000577473 CLCN6P51797 869 aa8.84□□□□□ -0.99
MIR4643-201ENST00000577473 DCBLD2Q96PD2 775 aa8.79□□□□□ -1
MIR4643-201ENST00000577473 STAG3Q9UJ98 1225 aa8.79□□□□□ -1
MIR4643-201ENST00000577473 CSRNP3Q8WYN3 585 aa8.75□□□□□ -1.01
MIR4643-201ENST00000577473 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
MIR4643-201ENST00000577473 PAK3O75914 559 aaPredicted RBP8.71□□□□□ -1.02
MIR4643-201ENST00000577473 POTEIP0CG38 1075 aa8.68□□□□□ -1.02
MIR4643-201ENST00000577473 SPDYE4A6NLX3 237 aa8.67□□□□□ -1.02
MIR4643-201ENST00000577473 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
MIR4643-201ENST00000577473 CREBZFQ9NS37 354 aa8.66□□□□□ -1.02
MIR4643-201ENST00000577473 NPM1P06748 294 aaKnown RBP eCLIP8.65□□□□□ -1.02
MIR4643-201ENST00000577473 EHMT2Q96KQ7 1210 aa8.62□□□□□ -1.03
MIR4643-201ENST00000577473 GALR2O43603 387 aaPredicted RBP8.58□□□□□ -1.04
MIR4643-201ENST00000577473 PLSCR2Q9NRY7 297 aa8.54□□□□□ -1.04
MIR4643-201ENST00000577473 PHF12Q96QT6 1004 aa8.53□□□□□ -1.04
MIR4643-201ENST00000577473 PLEKHG5O94827 1062 aa8.47□□□□□ -1.05
MIR4643-201ENST00000577473 OTUD5Q96G74 571 aa8.45□□□□□ -1.06
MIR4643-201ENST00000577473 TSPYL2Q9H2G4 693 aaPredicted RBP8.44□□□□□ -1.06
MIR4643-201ENST00000577473 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
MIR4643-201ENST00000577473 SLC39A7Q92504 469 aa8.42□□□□□ -1.06
MIR4643-201ENST00000577473 C7P10643 843 aa8.41□□□□□ -1.06
MIR4643-201ENST00000577473 MS4A3Q96HJ5 214 aa8.41□□□□□ -1.06
MIR4643-201ENST00000577473 POTEB2H3BUK9 544 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms