RNA–Protein interactions for RNA: ENST00000576420.5

RPH3AL-220, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS ALT2 TSL 3

Gene RPH3AL, Length 820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-220ENST00000576420 SF3B1O75533 1304 aaKnown RBP eCLIP17.44■□□□□ 0.383e-6■■■■■ 137.9
RPH3AL-220ENST00000576420 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.76■□□□□ 0.111e-6■■■■■ 78.6
RPH3AL-220ENST00000576420 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.44■□□□□ 0.067e-9■■■■■ 72.6
RPH3AL-220ENST00000576420 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.78■□□□□ 0.68e-7■■■■■ 52
RPH3AL-220ENST00000576420 DDX6P26196 483 aaKnown RBP eCLIP16.96■□□□□ 0.312e-8■■■■■ 51.7
RPH3AL-220ENST00000576420 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.65□□□□□ -0.062e-6■■■■■ 34.4
RPH3AL-220ENST00000576420 HNRNPKP61978 463 aaKnown RBP eCLIP15.97■□□□□ 0.151e-7■■■■■ 33.4
RPH3AL-220ENST00000576420 PCBP2Q15366 365 aaKnown RBP eCLIP15.3■□□□□ 0.046e-7■■■■■ 31.8
RPH3AL-220ENST00000576420 EIF3DO15371 548 aaKnown RBP eCLIP17.57■□□□□ 0.47e-7■■■■■ 29.4
RPH3AL-220ENST00000576420 SAFBQ15424 915 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■■■■ 28.5
RPH3AL-220ENST00000576420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.79■■□□□ 1.563e-7■■■■□ 26
RPH3AL-220ENST00000576420 ZC3H11AO75152 810 aaKnown RBP eCLIP17.58■□□□□ 0.49e-7■■■■□ 25.3
RPH3AL-220ENST00000576420 GTF2F1P35269 517 aaKnown RBP eCLIP17.56■□□□□ 0.49e-7■■■■□ 25.2
RPH3AL-220ENST00000576420 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.19■□□□□ 0.662e-7■■■■□ 23.1
RPH3AL-220ENST00000576420 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.392e-12■■■■□ 22.8
RPH3AL-220ENST00000576420 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.81■□□□□ 0.64e-6■■■■□ 22.6
RPH3AL-220ENST00000576420 HNRNPMP52272 730 aaKnown RBP eCLIP25.15■■□□□ 1.626e-7■■■■□ 22.5
RPH3AL-220ENST00000576420 EFTUD2Q15029 972 aaKnown RBP eCLIP15.6■□□□□ 0.091e-6■■■■□ 22
RPH3AL-220ENST00000576420 HLTFQ14527 1009 aaKnown RBP eCLIP15.84■□□□□ 0.138e-6■■■■□ 21.3
RPH3AL-220ENST00000576420 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.86□□□□□ -0.036e-7■■■■□ 20.9
RPH3AL-220ENST00000576420 PRPF4O43172 522 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■■■■□ 19.9
RPH3AL-220ENST00000576420 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.68■□□□□ 0.264e-6■■■□□ 18.8
RPH3AL-220ENST00000576420 SF3A3Q12874 501 aaKnown RBP eCLIP14.7□□□□□ -0.065e-9■■■□□ 18.5
RPH3AL-220ENST00000576420 PPIGQ13427 754 aaKnown RBP eCLIP18.22■□□□□ 0.516e-8■■■□□ 18.3
RPH3AL-220ENST00000576420 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.16■□□□□ 0.347e-7■■■□□ 17.7
RPH3AL-220ENST00000576420 FUSP35637 526 aaKnown RBP eCLIP10.66□□□□□ -0.72e-7■■■□□ 15.9
RPH3AL-220ENST00000576420 SF3B4Q15427 424 aaKnown RBP eCLIP14.41□□□□□ -0.17e-8■■□□□ 14.3
RPH3AL-220ENST00000576420 MATR3P43243 847 aaKnown RBP eCLIP17.53■□□□□ 0.46e-6■■□□□ 12.4
RPH3AL-220ENST00000576420 NKRFO15226 690 aaKnown RBP eCLIP18.39■□□□□ 0.532e-6■□□□□ 11
RPH3AL-220ENST00000576420 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.29■□□□□ 0.041e-6■□□□□ 10.9
RPH3AL-220ENST00000576420 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.69□□□□□ -0.064e-7■□□□□ 10.1
RPH3AL-220ENST00000576420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.493e-7■□□□□ 9.5
RPH3AL-220ENST00000576420 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.21■□□□□ 0.517e-11■□□□□ 8.4
Retrieved 33 of 33 RNA–protein pairs in 8.9 ms