RNA–Protein interactions for RNA: ENST00000576420.5

RPH3AL-220, Transcript of rabphilin 3A like (without C2 domains), humanhuman

APPRIS ALT2 TSL 3

Gene RPH3AL, Length 820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-220ENST00000576420 NISCHQ9Y2I1 1504 aa39.22■■■■□ 3.87
RPH3AL-220ENST00000576420 CCDC180Q9P1Z9 1646 aa34.93■■■■□ 3.18
RPH3AL-220ENST00000576420 ABCC9O60706 1549 aa34.35■■■■□ 3.09
RPH3AL-220ENST00000576420 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
RPH3AL-220ENST00000576420 NACADO15069 1562 aa32.88■■■□□ 2.85
RPH3AL-220ENST00000576420 ZCCHC6Q5VYS8 1495 aaKnown RBP32.74■■■□□ 2.83
RPH3AL-220ENST00000576420 DCAF8L2P0C7V8 631 aa32.68■■■□□ 2.82
RPH3AL-220ENST00000576420 MYO15BQ96JP2 1530 aa32.66■■■□□ 2.82
RPH3AL-220ENST00000576420 DCAF1Q9Y4B6 1507 aa32.46■■■□□ 2.79
RPH3AL-220ENST00000576420 UNC13AQ9UPW8 1703 aa32.24■■■□□ 2.75
RPH3AL-220ENST00000576420 PABPN1Q86U42 306 aaKnown RBP eCLIP32.04■■■□□ 2.72
RPH3AL-220ENST00000576420 BICRAQ9NZM4 1560 aa32.03■■■□□ 2.72
RPH3AL-220ENST00000576420 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
RPH3AL-220ENST00000576420 DNAJC5BQ9UF47 199 aa31.79■■■□□ 2.68
RPH3AL-220ENST00000576420 SHROOM4Q9ULL8 1493 aa31.65■■■□□ 2.66
RPH3AL-220ENST00000576420 EIF4G1Q04637 1599 aaKnown RBP31.17■■■□□ 2.58
RPH3AL-220ENST00000576420 CC2D2AQ9P2K1 1620 aa31.09■■■□□ 2.57
RPH3AL-220ENST00000576420 CECR2Q9BXF3 1484 aa30.9■■■□□ 2.54
RPH3AL-220ENST00000576420 SMARCA4P51532 1647 aa30.44■■■□□ 2.46
RPH3AL-220ENST00000576420 NCAPD3P42695 1498 aa30.37■■■□□ 2.45
RPH3AL-220ENST00000576420 BAZ1AQ9NRL2 1556 aaPredicted RBP30.36■■■□□ 2.45
RPH3AL-220ENST00000576420 ATAD2BQ9ULI0 1458 aa30.33■■■□□ 2.45
RPH3AL-220ENST00000576420 SMARCA2P51531 1590 aa30.26■■■□□ 2.43
RPH3AL-220ENST00000576420 MROH2BQ7Z745 1585 aa30.25■■■□□ 2.43
RPH3AL-220ENST00000576420 HMGXB3Q12766 1538 aa30.19■■■□□ 2.42
RPH3AL-220ENST00000576420 PEG3Q9GZU2 1588 aa30.18■■■□□ 2.42
RPH3AL-220ENST00000576420 BAZ1BQ9UIG0 1483 aaKnown RBP30.03■■■□□ 2.4
RPH3AL-220ENST00000576420 WIZO95785 1651 aa29.94■■■□□ 2.38
RPH3AL-220ENST00000576420 RSF1Q96T23 1441 aaPredicted RBP29.92■■■□□ 2.38
RPH3AL-220ENST00000576420 NESP48681 1621 aa29.68■■■□□ 2.34
RPH3AL-220ENST00000576420 TOP2AP11388 1531 aaKnown RBP29.61■■■□□ 2.33
RPH3AL-220ENST00000576420 ERCC6Q03468 1493 aa29.59■■■□□ 2.33
RPH3AL-220ENST00000576420 LAMC3Q9Y6N6 1575 aa29.59■■■□□ 2.33
RPH3AL-220ENST00000576420 CADPSQ9ULU8 1353 aa29.44■■■□□ 2.3
RPH3AL-220ENST00000576420 CUX2O14529 1486 aa29.42■■■□□ 2.3
RPH3AL-220ENST00000576420 PDS5BQ9NTI5 1447 aa29.36■■■□□ 2.29
RPH3AL-220ENST00000576420 KIF21AQ7Z4S6 1674 aa29.32■■■□□ 2.28
RPH3AL-220ENST00000576420 THOC2Q8NI27 1593 aaKnown RBP29.31■■■□□ 2.28
RPH3AL-220ENST00000576420 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
RPH3AL-220ENST00000576420 CFTRP13569 1480 aa29.23■■■□□ 2.27
RPH3AL-220ENST00000576420 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
RPH3AL-220ENST00000576420 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
RPH3AL-220ENST00000576420 MRC2Q9UBG0 1479 aa29.09■■■□□ 2.25
RPH3AL-220ENST00000576420 CEP164Q9UPV0 1460 aa29.07■■■□□ 2.24
RPH3AL-220ENST00000576420 WDR62O43379 1518 aa29.03■■■□□ 2.24
RPH3AL-220ENST00000576420 PRDM2Q13029 1718 aa29■■■□□ 2.23
RPH3AL-220ENST00000576420 URB2Q14146 1524 aaKnown RBP28.84■■■□□ 2.21
RPH3AL-220ENST00000576420 DNAJC5Q9H3Z4 198 aa28.8■■■□□ 2.2
RPH3AL-220ENST00000576420 TOPBP1Q92547 1522 aa28.61■■■□□ 2.17
RPH3AL-220ENST00000576420 ABCC8Q09428 1581 aa28.58■■■□□ 2.17
RPH3AL-220ENST00000576420 DNMBPQ6XZF7 1577 aa28.56■■■□□ 2.16
RPH3AL-220ENST00000576420 IFT140Q96RY7 1462 aa28.48■■■□□ 2.15
RPH3AL-220ENST00000576420 CUX1P39880 1505 aa28.38■■■□□ 2.13
RPH3AL-220ENST00000576420 ZNF608Q9ULD9 1512 aaPredicted RBP28.38■■■□□ 2.13
RPH3AL-220ENST00000576420 POLA1P09884 1462 aaPredicted RBP28.35■■■□□ 2.13
RPH3AL-220ENST00000576420 TARBP1Q13395 1621 aaKnown RBP28.35■■■□□ 2.13
RPH3AL-220ENST00000576420 EIF4G3O43432 1585 aaKnown RBP28.26■■■□□ 2.11
RPH3AL-220ENST00000576420 FGD5Q6ZNL6 1462 aa28.24■■■□□ 2.11
RPH3AL-220ENST00000576420 RAD54L2Q9Y4B4 1467 aa28.21■■■□□ 2.11
RPH3AL-220ENST00000576420 SOGA1O94964 1423 aa28.21■■■□□ 2.11
RPH3AL-220ENST00000576420 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
RPH3AL-220ENST00000576420 BIVM-ERCC5R4GMW8 1640 aa28.18■■■□□ 2.1
RPH3AL-220ENST00000576420 AQRO60306 1485 aaKnown RBP eCLIP28.18■■■□□ 2.1
RPH3AL-220ENST00000576420 WRNQ14191 1432 aaPredicted RBP eCLIP28.16■■■□□ 2.1
RPH3AL-220ENST00000576420 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
RPH3AL-220ENST00000576420 OSCARQ8IYS5 282 aa28.12■■■□□ 2.09
RPH3AL-220ENST00000576420 WDR97A6NE52 1622 aa28.1■■■□□ 2.09
RPH3AL-220ENST00000576420 TDRD9Q8NDG6 1382 aaKnown RBP28.08■■■□□ 2.09
RPH3AL-220ENST00000576420 ABCA10Q8WWZ4 1543 aa27.97■■■□□ 2.07
RPH3AL-220ENST00000576420 CHD1O14646 1710 aa27.94■■■□□ 2.06
RPH3AL-220ENST00000576420 GRIN2BQ13224 1484 aa27.92■■■□□ 2.06
RPH3AL-220ENST00000576420 SNAPC4Q5SXM2 1469 aa27.91■■■□□ 2.06
RPH3AL-220ENST00000576420 ABCA5Q8WWZ7 1642 aa27.9■■■□□ 2.06
RPH3AL-220ENST00000576420 GAPVD1Q14C86 1478 aa27.89■■■□□ 2.05
RPH3AL-220ENST00000576420 MAGI1Q96QZ7 1491 aaPredicted RBP27.88■■■□□ 2.05
RPH3AL-220ENST00000576420 PBRM1Q86U86 1689 aa27.85■■■□□ 2.05
RPH3AL-220ENST00000576420 FBLN2P98095 1184 aa27.81■■■□□ 2.04
RPH3AL-220ENST00000576420 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
RPH3AL-220ENST00000576420 RIMBP3CA6NJZ7 1639 aa27.74■■■□□ 2.03
RPH3AL-220ENST00000576420 RIMBP3BA6NNM3 1639 aa27.74■■■□□ 2.03
RPH3AL-220ENST00000576420 RIMBP3Q9UFD9 1639 aa27.74■■■□□ 2.03
RPH3AL-220ENST00000576420 CHMP7Q8WUX9 453 aaPredicted RBP27.72■■■□□ 2.03
RPH3AL-220ENST00000576420 ARHGEF11O15085 1522 aa27.71■■■□□ 2.03
RPH3AL-220ENST00000576420 CLASP1Q7Z460 1538 aa27.67■■■□□ 2.02
RPH3AL-220ENST00000576420 TRIM41Q8WV44 630 aa27.67■■■□□ 2.02
RPH3AL-220ENST00000576420 ERICH3Q5RHP9 1530 aa27.63■■■□□ 2.01
RPH3AL-220ENST00000576420 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
RPH3AL-220ENST00000576420 GRIN2AQ12879 1464 aa27.57■■■□□ 2
RPH3AL-220ENST00000576420 FHAD1B1AJZ9 1412 aa27.56■■■□□ 2
RPH3AL-220ENST00000576420 KIF27Q86VH2 1401 aa27.51■■□□□ 1.99
RPH3AL-220ENST00000576420 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
RPH3AL-220ENST00000576420 NUP160Q12769 1436 aa27.48■■□□□ 1.99
RPH3AL-220ENST00000576420 CEP170Q5SW79 1584 aa27.45■■□□□ 1.99
RPH3AL-220ENST00000576420 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
RPH3AL-220ENST00000576420 IGF1RP08069 1367 aa27.43■■□□□ 1.98
RPH3AL-220ENST00000576420 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
RPH3AL-220ENST00000576420 CUL7Q14999 1698 aa27.4■■□□□ 1.98
RPH3AL-220ENST00000576420 SHROOM2Q13796 1616 aa27.31■■□□□ 1.96
RPH3AL-220ENST00000576420 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
RPH3AL-220ENST00000576420 ERCC6L2Q5T890 1561 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms