RNA–Protein interactions for RNA: ENST00000570625.5

EIF4A3-202, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-202ENST00000570625 AEBP2Q6ZN18 517 aaPredicted RBP32.41■■■□□ 2.78
EIF4A3-202ENST00000570625 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
EIF4A3-202ENST00000570625 SENP3Q9H4L4 574 aaPredicted RBP27.7■■■□□ 2.02
EIF4A3-202ENST00000570625 PHF23Q9BUL5 403 aaPredicted RBP27.31■■□□□ 1.96
EIF4A3-202ENST00000570625 FOXD1Q16676 465 aa25.95■■□□□ 1.74
EIF4A3-202ENST00000570625 POTEDQ86YR6 584 aa25.1■■□□□ 1.61
EIF4A3-202ENST00000570625 MSH5O43196 834 aa24.49■■□□□ 1.51
EIF4A3-202ENST00000570625 PIAS4Q8N2W9 510 aaPredicted RBP24.08■■□□□ 1.45
EIF4A3-202ENST00000570625 PPP6R1Q9UPN7 881 aa23.79■■□□□ 1.4
EIF4A3-202ENST00000570625 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
EIF4A3-202ENST00000570625 ADRA2BP18089 450 aa23.68■■□□□ 1.38
EIF4A3-202ENST00000570625 MAPK8IP2Q13387 824 aaPredicted RBP21.98■■□□□ 1.11
EIF4A3-202ENST00000570625 DMRT2Q9Y5R5 561 aa21.86■■□□□ 1.09
EIF4A3-202ENST00000570625 SCAF1Q9H7N4 1312 aaKnown RBP21.61■■□□□ 1.05
EIF4A3-202ENST00000570625 CACNB1Q02641 598 aaPredicted RBP21.5■■□□□ 1.03
EIF4A3-202ENST00000570625 DCAF8L1A6NGE4 600 aa21.11■□□□□ 0.97
EIF4A3-202ENST00000570625 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
EIF4A3-202ENST00000570625 HOXD11P31277 338 aaPredicted RBP20.79■□□□□ 0.92
EIF4A3-202ENST00000570625 PPP4R3CPQ6ZMV5 832 aa20.75■□□□□ 0.91
EIF4A3-202ENST00000570625 C1QBPQ07021 282 aaKnown RBP20.5■□□□□ 0.87
EIF4A3-202ENST00000570625 CNKSR2Q8WXI2 1034 aa20.49■□□□□ 0.87
EIF4A3-202ENST00000570625 RNF216Q9NWF9 866 aaPredicted RBP20.46■□□□□ 0.87
EIF4A3-202ENST00000570625 DNAJC5BQ9UF47 199 aa20.13■□□□□ 0.81
EIF4A3-202ENST00000570625 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
EIF4A3-202ENST00000570625 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
EIF4A3-202ENST00000570625 POTEHQ6S545 545 aa19.54■□□□□ 0.72
EIF4A3-202ENST00000570625 NPM3O75607 178 aaKnown RBP19.45■□□□□ 0.7
EIF4A3-202ENST00000570625 U3KPZ7 1027 aaPredicted RBP19.34■□□□□ 0.69
EIF4A3-202ENST00000570625 CAPN15O75808 1086 aa19.32■□□□□ 0.68
EIF4A3-202ENST00000570625 DSG3P32926 999 aa19.32■□□□□ 0.68
EIF4A3-202ENST00000570625 SPINK5Q9NQ38 1064 aaPredicted RBP19.31■□□□□ 0.68
EIF4A3-202ENST00000570625 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
EIF4A3-202ENST00000570625 ABCB7O75027 752 aa18.82■□□□□ 0.6
EIF4A3-202ENST00000570625 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
EIF4A3-202ENST00000570625 ZNF219Q9P2Y4 722 aaPredicted RBP18.71■□□□□ 0.59
EIF4A3-202ENST00000570625 APLP2Q06481 763 aa18.69■□□□□ 0.58
EIF4A3-202ENST00000570625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.52■□□□□ 0.56
EIF4A3-202ENST00000570625 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
EIF4A3-202ENST00000570625 KCNA4P22459 653 aa18.5■□□□□ 0.55
EIF4A3-202ENST00000570625 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
EIF4A3-202ENST00000570625 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
EIF4A3-202ENST00000570625 CHRDL2Q6WN34 429 aa18.31■□□□□ 0.52
EIF4A3-202ENST00000570625 POLA2Q14181 598 aa18.2■□□□□ 0.5
EIF4A3-202ENST00000570625 SP7Q8TDD2 431 aaPredicted RBP17.99■□□□□ 0.47
EIF4A3-202ENST00000570625 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
EIF4A3-202ENST00000570625 AKT1S1Q96B36 256 aa17.86■□□□□ 0.45
EIF4A3-202ENST00000570625 PIP4P2Q8N4L2 257 aa17.75■□□□□ 0.43
EIF4A3-202ENST00000570625 REM2Q8IYK8 340 aaPredicted RBP17.73■□□□□ 0.43
EIF4A3-202ENST00000570625 ATF5Q9Y2D1 282 aaPredicted RBP17.69■□□□□ 0.42
EIF4A3-202ENST00000570625 HAX1O00165 279 aa17.66■□□□□ 0.42
EIF4A3-202ENST00000570625 ZBTB12Q9Y330 459 aaPredicted RBP17.66■□□□□ 0.42
EIF4A3-202ENST00000570625 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
EIF4A3-202ENST00000570625 PITPNM1O00562 1244 aa17.54■□□□□ 0.4
EIF4A3-202ENST00000570625 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
EIF4A3-202ENST00000570625 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
EIF4A3-202ENST00000570625 EVX2Q03828 476 aa17.39■□□□□ 0.37
EIF4A3-202ENST00000570625 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
EIF4A3-202ENST00000570625 PRKAR2AP13861 404 aaKnown RBP17.11■□□□□ 0.33
EIF4A3-202ENST00000570625 SPDYE2BA6NHP3 402 aa17.09■□□□□ 0.33
EIF4A3-202ENST00000570625 SPDYE6P0CI01 402 aa17.09■□□□□ 0.33
EIF4A3-202ENST00000570625 SPDYE2Q495Y8 402 aa17.09■□□□□ 0.33
EIF4A3-202ENST00000570625 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
EIF4A3-202ENST00000570625 FBLN2P98095 1184 aa17■□□□□ 0.31
EIF4A3-202ENST00000570625 ZBTB22O15209 634 aa16.99■□□□□ 0.31
EIF4A3-202ENST00000570625 C19orf67A6NJJ6 358 aa16.97■□□□□ 0.31
EIF4A3-202ENST00000570625 SPDYE1Q8NFV5 336 aaPredicted RBP16.97■□□□□ 0.31
EIF4A3-202ENST00000570625 GABBR2O75899 941 aa16.93■□□□□ 0.3
EIF4A3-202ENST00000570625 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
EIF4A3-202ENST00000570625 LHX8Q68G74 356 aa16.9■□□□□ 0.3
EIF4A3-202ENST00000570625 ZNF692Q9BU19 519 aaPredicted RBP16.85■□□□□ 0.29
EIF4A3-202ENST00000570625 CHADLQ6NUI6 762 aa16.81■□□□□ 0.28
EIF4A3-202ENST00000570625 MKRN4PQ13434 485 aaPredicted RBP16.8■□□□□ 0.28
EIF4A3-202ENST00000570625 SSUH2Q9Y2M2 353 aa16.77■□□□□ 0.28
EIF4A3-202ENST00000570625 PRR29P0C7W0 189 aa16.66■□□□□ 0.26
EIF4A3-202ENST00000570625 PABPN1Q86U42 306 aaKnown RBP eCLIP16.57■□□□□ 0.24
EIF4A3-202ENST00000570625 POTEIP0CG38 1075 aa16.56■□□□□ 0.24
EIF4A3-202ENST00000570625 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
EIF4A3-202ENST00000570625 FARP1Q9Y4F1 1045 aaPredicted RBP16.44■□□□□ 0.22
EIF4A3-202ENST00000570625 PLSCR2Q9NRY7 297 aa16.42■□□□□ 0.22
EIF4A3-202ENST00000570625 CLCN6P51797 869 aa16.34■□□□□ 0.21
EIF4A3-202ENST00000570625 DCBLD2Q96PD2 775 aa16.34■□□□□ 0.21
EIF4A3-202ENST00000570625 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
EIF4A3-202ENST00000570625 ZNF579Q8NAF0 562 aaKnown RBP16.17■□□□□ 0.18
EIF4A3-202ENST00000570625 GALR2O43603 387 aaPredicted RBP16.09■□□□□ 0.17
EIF4A3-202ENST00000570625 OTUD5Q96G74 571 aa16.08■□□□□ 0.16
EIF4A3-202ENST00000570625 CREBZFQ9NS37 354 aa16.05■□□□□ 0.16
EIF4A3-202ENST00000570625 POTEB2H3BUK9 544 aa16.02■□□□□ 0.16
EIF4A3-202ENST00000570625 POTEMA6NI47 508 aa15.94■□□□□ 0.14
EIF4A3-202ENST00000570625 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
EIF4A3-202ENST00000570625 PHF12Q96QT6 1004 aa15.91■□□□□ 0.14
EIF4A3-202ENST00000570625 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
EIF4A3-202ENST00000570625 POTEGQ6S5H5 508 aa15.87■□□□□ 0.13
EIF4A3-202ENST00000570625 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
EIF4A3-202ENST00000570625 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
EIF4A3-202ENST00000570625 METRNQ9UJH8 293 aa15.7■□□□□ 0.1
EIF4A3-202ENST00000570625 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
EIF4A3-202ENST00000570625 POTEJP0CG39 1038 aa15.67■□□□□ 0.1
EIF4A3-202ENST00000570625 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
EIF4A3-202ENST00000570625 ASTLQ6HA08 431 aaPredicted RBP15.66■□□□□ 0.1
EIF4A3-202ENST00000570625 PCDH10Q9P2E7 1040 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms