RNA–Protein interactions for RNA: ENST00000569894.5

HACD3-211, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 5 BASIC

Gene HACD3, Length 1,471 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-211ENST00000569894 AEBP2Q6ZN18 517 aaPredicted RBP24.8■■□□□ 1.56
HACD3-211ENST00000569894 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
HACD3-211ENST00000569894 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
HACD3-211ENST00000569894 SENP3Q9H4L4 574 aaPredicted RBP20.93■□□□□ 0.94
HACD3-211ENST00000569894 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
HACD3-211ENST00000569894 FOXD1Q16676 465 aa19.4■□□□□ 0.7
HACD3-211ENST00000569894 PPP6R1Q9UPN7 881 aa19.02■□□□□ 0.63
HACD3-211ENST00000569894 ADRA2BP18089 450 aa18.99■□□□□ 0.63
HACD3-211ENST00000569894 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
HACD3-211ENST00000569894 KCNA4P22459 653 aa17.91■□□□□ 0.46
HACD3-211ENST00000569894 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
HACD3-211ENST00000569894 MSH5O43196 834 aa17.69■□□□□ 0.42
HACD3-211ENST00000569894 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
HACD3-211ENST00000569894 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
HACD3-211ENST00000569894 NPM3O75607 178 aaKnown RBP17.24■□□□□ 0.35
HACD3-211ENST00000569894 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
HACD3-211ENST00000569894 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
HACD3-211ENST00000569894 SLC4A1APQ9BWU0 796 aaKnown RBP17.11■□□□□ 0.33
HACD3-211ENST00000569894 EHMT2Q96KQ7 1210 aa17.07■□□□□ 0.32
HACD3-211ENST00000569894 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
HACD3-211ENST00000569894 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
HACD3-211ENST00000569894 DNAJC5BQ9UF47 199 aa16.78■□□□□ 0.28
HACD3-211ENST00000569894 CSRNP3Q8WYN3 585 aa16.77■□□□□ 0.28
HACD3-211ENST00000569894 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
HACD3-211ENST00000569894 ZBTB22O15209 634 aa16.52■□□□□ 0.23
HACD3-211ENST00000569894 POTEDQ86YR6 584 aa16.46■□□□□ 0.23
HACD3-211ENST00000569894 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
HACD3-211ENST00000569894 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
HACD3-211ENST00000569894 DCAF8L1A6NGE4 600 aa15.93■□□□□ 0.14
HACD3-211ENST00000569894 MYCNP04198 464 aaPredicted RBP15.91■□□□□ 0.14
HACD3-211ENST00000569894 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
HACD3-211ENST00000569894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.78■□□□□ 0.12
HACD3-211ENST00000569894 U3KPZ7 1027 aaPredicted RBP15.63■□□□□ 0.09
HACD3-211ENST00000569894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.54■□□□□ 0.08
HACD3-211ENST00000569894 HNRNPUL2Q1KMD3 747 aaKnown RBP15.54■□□□□ 0.08
HACD3-211ENST00000569894 SAMD1Q6SPF0 538 aaPredicted RBP15.52■□□□□ 0.07
HACD3-211ENST00000569894 ATF5Q9Y2D1 282 aaPredicted RBP15.47■□□□□ 0.07
HACD3-211ENST00000569894 APLP2Q06481 763 aa15.26■□□□□ 0.03
HACD3-211ENST00000569894 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
HACD3-211ENST00000569894 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
HACD3-211ENST00000569894 FKBP8Q14318 412 aa15.08■□□□□ 0
HACD3-211ENST00000569894 C1QBPQ07021 282 aaKnown RBP15.06■□□□□ 0
HACD3-211ENST00000569894 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ -0
HACD3-211ENST00000569894 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
HACD3-211ENST00000569894 CAPN15O75808 1086 aa14.91□□□□□ -0.02
HACD3-211ENST00000569894 POLA2Q14181 598 aa14.84□□□□□ -0.03
HACD3-211ENST00000569894 MKRN4PQ13434 485 aaPredicted RBP14.83□□□□□ -0.03
HACD3-211ENST00000569894 FBLN2P98095 1184 aa14.73□□□□□ -0.05
HACD3-211ENST00000569894 ABCB7O75027 752 aa14.68□□□□□ -0.06
HACD3-211ENST00000569894 SPDYE4A6NLX3 237 aa14.66□□□□□ -0.06
HACD3-211ENST00000569894 DSG3P32926 999 aa14.63□□□□□ -0.07
HACD3-211ENST00000569894 ZBTB12Q9Y330 459 aaPredicted RBP14.63□□□□□ -0.07
HACD3-211ENST00000569894 PROM2Q8N271 834 aa14.57□□□□□ -0.08
HACD3-211ENST00000569894 AMER1Q5JTC6 1135 aaPredicted RBP14.51□□□□□ -0.09
HACD3-211ENST00000569894 RTN4Q9NQC3 1192 aaKnown RBP14.5□□□□□ -0.09
HACD3-211ENST00000569894 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
HACD3-211ENST00000569894 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
HACD3-211ENST00000569894 OSCARQ8IYS5 282 aa14.31□□□□□ -0.12
HACD3-211ENST00000569894 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
HACD3-211ENST00000569894 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
HACD3-211ENST00000569894 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
HACD3-211ENST00000569894 ZNF692Q9BU19 519 aaPredicted RBP14.27□□□□□ -0.12
HACD3-211ENST00000569894 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
HACD3-211ENST00000569894 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
HACD3-211ENST00000569894 PABPN1Q86U42 306 aaKnown RBP eCLIP14.11□□□□□ -0.15
HACD3-211ENST00000569894 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
HACD3-211ENST00000569894 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
HACD3-211ENST00000569894 RBM42Q9BTD8 480 aaKnown RBP13.9□□□□□ -0.18
HACD3-211ENST00000569894 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
HACD3-211ENST00000569894 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
HACD3-211ENST00000569894 MIER1Q8N108 512 aa13.82□□□□□ -0.2
HACD3-211ENST00000569894 KLHL34Q8N239 644 aa13.82□□□□□ -0.2
HACD3-211ENST00000569894 SPOCK2Q92563 424 aa13.82□□□□□ -0.2
HACD3-211ENST00000569894 PKD2Q13563 968 aa13.8□□□□□ -0.2
HACD3-211ENST00000569894 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
HACD3-211ENST00000569894 SPDYE1Q8NFV5 336 aaPredicted RBP13.74□□□□□ -0.21
HACD3-211ENST00000569894 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
HACD3-211ENST00000569894 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
HACD3-211ENST00000569894 ZBTB47Q9UFB7 747 aaPredicted RBP13.68□□□□□ -0.22
HACD3-211ENST00000569894 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
HACD3-211ENST00000569894 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
HACD3-211ENST00000569894 PRR29P0C7W0 189 aa13.58□□□□□ -0.24
HACD3-211ENST00000569894 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
HACD3-211ENST00000569894 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
HACD3-211ENST00000569894 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
HACD3-211ENST00000569894 MNX1P50219 401 aaPredicted RBP13.51□□□□□ -0.25
HACD3-211ENST00000569894 NUBP1P53384 320 aa13.5□□□□□ -0.25
HACD3-211ENST00000569894 CIZ1Q9ULV3 898 aaPredicted RBP13.48□□□□□ -0.25
HACD3-211ENST00000569894 RGL2O15211 777 aa13.47□□□□□ -0.25
HACD3-211ENST00000569894 TRIM41Q8WV44 630 aa13.44□□□□□ -0.26
HACD3-211ENST00000569894 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
HACD3-211ENST00000569894 GSE1Q14687 1217 aa13.42□□□□□ -0.26
HACD3-211ENST00000569894 NPM1P06748 294 aaKnown RBP eCLIP13.36□□□□□ -0.27
HACD3-211ENST00000569894 DCAF8Q5TAQ9 597 aa13.33□□□□□ -0.28
HACD3-211ENST00000569894 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
HACD3-211ENST00000569894 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
HACD3-211ENST00000569894 FAM212AQ96EL1 285 aa13.32□□□□□ -0.28
HACD3-211ENST00000569894 RNF25Q96BH1 459 aaPredicted RBP13.29□□□□□ -0.28
HACD3-211ENST00000569894 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
HACD3-211ENST00000569894 CHRM1P11229 460 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms