RNA–Protein interactions for RNA: ENST00000569141.1

ACSM3-214, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 5

Gene ACSM3, Length 405 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-214ENST00000569141 AEBP2Q6ZN18 517 aaPredicted RBP27.63■■■□□ 2.01
ACSM3-214ENST00000569141 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
ACSM3-214ENST00000569141 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
ACSM3-214ENST00000569141 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
ACSM3-214ENST00000569141 FOXD1Q16676 465 aa22.09■■□□□ 1.13
ACSM3-214ENST00000569141 MSH5O43196 834 aa20.92■□□□□ 0.94
ACSM3-214ENST00000569141 POTEDQ86YR6 584 aa20.85■□□□□ 0.93
ACSM3-214ENST00000569141 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
ACSM3-214ENST00000569141 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
ACSM3-214ENST00000569141 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
ACSM3-214ENST00000569141 ADRA2BP18089 450 aa20.3■□□□□ 0.84
ACSM3-214ENST00000569141 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
ACSM3-214ENST00000569141 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
ACSM3-214ENST00000569141 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
ACSM3-214ENST00000569141 CACNB1Q02641 598 aaPredicted RBP18.1■□□□□ 0.49
ACSM3-214ENST00000569141 PPP4R3CPQ6ZMV5 832 aa18.04■□□□□ 0.48
ACSM3-214ENST00000569141 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
ACSM3-214ENST00000569141 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
ACSM3-214ENST00000569141 CNKSR2Q8WXI2 1034 aa17.83■□□□□ 0.44
ACSM3-214ENST00000569141 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
ACSM3-214ENST00000569141 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
ACSM3-214ENST00000569141 C1QBPQ07021 282 aaKnown RBP17.54■□□□□ 0.4
ACSM3-214ENST00000569141 DNAJC5BQ9UF47 199 aa17.5■□□□□ 0.39
ACSM3-214ENST00000569141 NCBP3Q53F19 620 aaKnown RBP17.35■□□□□ 0.37
ACSM3-214ENST00000569141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
ACSM3-214ENST00000569141 NPM3O75607 178 aaKnown RBP16.98■□□□□ 0.31
ACSM3-214ENST00000569141 U3KPZ7 1027 aaPredicted RBP16.65■□□□□ 0.26
ACSM3-214ENST00000569141 CAPN15O75808 1086 aa16.54■□□□□ 0.24
ACSM3-214ENST00000569141 DSG3P32926 999 aa16.5■□□□□ 0.23
ACSM3-214ENST00000569141 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
ACSM3-214ENST00000569141 APLP2Q06481 763 aa16.34■□□□□ 0.21
ACSM3-214ENST00000569141 KCNA4P22459 653 aa16.33■□□□□ 0.2
ACSM3-214ENST00000569141 POTEHQ6S545 545 aa16.31■□□□□ 0.2
ACSM3-214ENST00000569141 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
ACSM3-214ENST00000569141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.22■□□□□ 0.19
ACSM3-214ENST00000569141 HNRNPUL2Q1KMD3 747 aaKnown RBP16.22■□□□□ 0.19
ACSM3-214ENST00000569141 ZNF219Q9P2Y4 722 aaPredicted RBP16.22■□□□□ 0.19
ACSM3-214ENST00000569141 TRHP20396 242 aaPredicted RBP16.18■□□□□ 0.18
ACSM3-214ENST00000569141 SAMD1Q6SPF0 538 aaPredicted RBP16.08■□□□□ 0.16
ACSM3-214ENST00000569141 ABCB7O75027 752 aa16.06■□□□□ 0.16
ACSM3-214ENST00000569141 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
ACSM3-214ENST00000569141 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.12
ACSM3-214ENST00000569141 POLA2Q14181 598 aa15.68■□□□□ 0.1
ACSM3-214ENST00000569141 CHRDL2Q6WN34 429 aa15.56■□□□□ 0.08
ACSM3-214ENST00000569141 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
ACSM3-214ENST00000569141 SLC4A1APQ9BWU0 796 aaKnown RBP15.42■□□□□ 0.06
ACSM3-214ENST00000569141 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
ACSM3-214ENST00000569141 AKT1S1Q96B36 256 aa15.4■□□□□ 0.06
ACSM3-214ENST00000569141 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
ACSM3-214ENST00000569141 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
ACSM3-214ENST00000569141 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
ACSM3-214ENST00000569141 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
ACSM3-214ENST00000569141 PIP4P2Q8N4L2 257 aa15.09■□□□□ 0.01
ACSM3-214ENST00000569141 ATXN8OSP0DMR3 200 aa15.05■□□□□ -0
ACSM3-214ENST00000569141 PITPNM1O00562 1244 aa15□□□□□ -0.01
ACSM3-214ENST00000569141 FXR2P51116 673 aaKnown RBP eCLIP14.99□□□□□ -0.01
ACSM3-214ENST00000569141 ZBTB22O15209 634 aa14.96□□□□□ -0.01
ACSM3-214ENST00000569141 HAX1O00165 279 aa14.95□□□□□ -0.02
ACSM3-214ENST00000569141 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
ACSM3-214ENST00000569141 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
ACSM3-214ENST00000569141 FBLN2P98095 1184 aa14.9□□□□□ -0.02
ACSM3-214ENST00000569141 SPDYE2Q495Y8 402 aa14.9□□□□□ -0.02
ACSM3-214ENST00000569141 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
ACSM3-214ENST00000569141 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
ACSM3-214ENST00000569141 PRKAR2AP13861 404 aaKnown RBP14.64□□□□□ -0.07
ACSM3-214ENST00000569141 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
ACSM3-214ENST00000569141 EVX2Q03828 476 aa14.63□□□□□ -0.07
ACSM3-214ENST00000569141 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
ACSM3-214ENST00000569141 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
ACSM3-214ENST00000569141 C19orf67A6NJJ6 358 aa14.52□□□□□ -0.09
ACSM3-214ENST00000569141 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
ACSM3-214ENST00000569141 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
ACSM3-214ENST00000569141 GABBR2O75899 941 aa14.37□□□□□ -0.11
ACSM3-214ENST00000569141 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
ACSM3-214ENST00000569141 LHX8Q68G74 356 aa14.21□□□□□ -0.13
ACSM3-214ENST00000569141 CLCN6P51797 869 aa14.2□□□□□ -0.14
ACSM3-214ENST00000569141 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
ACSM3-214ENST00000569141 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
ACSM3-214ENST00000569141 CSRNP3Q8WYN3 585 aa14.03□□□□□ -0.16
ACSM3-214ENST00000569141 STAG3Q9UJ98 1225 aa14.03□□□□□ -0.16
ACSM3-214ENST00000569141 POTEIP0CG38 1075 aa14□□□□□ -0.17
ACSM3-214ENST00000569141 DCBLD2Q96PD2 775 aa13.96□□□□□ -0.17
ACSM3-214ENST00000569141 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
ACSM3-214ENST00000569141 CREBZFQ9NS37 354 aa13.92□□□□□ -0.18
ACSM3-214ENST00000569141 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
ACSM3-214ENST00000569141 SPDYE4A6NLX3 237 aa13.83□□□□□ -0.2
ACSM3-214ENST00000569141 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
ACSM3-214ENST00000569141 NPM1P06748 294 aaKnown RBP eCLIP13.76□□□□□ -0.21
ACSM3-214ENST00000569141 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
ACSM3-214ENST00000569141 EHMT2Q96KQ7 1210 aa13.65□□□□□ -0.22
ACSM3-214ENST00000569141 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
ACSM3-214ENST00000569141 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
ACSM3-214ENST00000569141 OTUD5Q96G74 571 aa13.58□□□□□ -0.24
ACSM3-214ENST00000569141 POTEB2H3BUK9 544 aa13.52□□□□□ -0.25
ACSM3-214ENST00000569141 PLSCR2Q9NRY7 297 aa13.52□□□□□ -0.25
ACSM3-214ENST00000569141 PELP1Q8IZL8 1130 aaKnown RBP13.49□□□□□ -0.25
ACSM3-214ENST00000569141 ASTLQ6HA08 431 aaPredicted RBP13.48□□□□□ -0.25
ACSM3-214ENST00000569141 C7P10643 843 aa13.47□□□□□ -0.25
ACSM3-214ENST00000569141 SLC39A7Q92504 469 aa13.47□□□□□ -0.25
ACSM3-214ENST00000569141 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms