RNA–Protein interactions for RNA: ENST00000568841.5

SNAP23-220, Transcript of synaptosome associated protein 23, humanhuman

TSL 3

Gene SNAP23, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP23-220ENST00000568841 AEBP2Q6ZN18 517 aaPredicted RBP29.35■■■□□ 2.29
SNAP23-220ENST00000568841 CHIC1Q5VXU3 224 aa27.95■■■□□ 2.06
SNAP23-220ENST00000568841 SENP3Q9H4L4 574 aaPredicted RBP24.87■■□□□ 1.57
SNAP23-220ENST00000568841 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
SNAP23-220ENST00000568841 FOXD1Q16676 465 aa23.24■■□□□ 1.31
SNAP23-220ENST00000568841 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
SNAP23-220ENST00000568841 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
SNAP23-220ENST00000568841 ADRA2BP18089 450 aa21.76■■□□□ 1.07
SNAP23-220ENST00000568841 PIAS4Q8N2W9 510 aaPredicted RBP21.66■■□□□ 1.06
SNAP23-220ENST00000568841 MSH5O43196 834 aa21.59■■□□□ 1.05
SNAP23-220ENST00000568841 POTEDQ86YR6 584 aa20.89■□□□□ 0.93
SNAP23-220ENST00000568841 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
SNAP23-220ENST00000568841 DMRT2Q9Y5R5 561 aa19.8■□□□□ 0.76
SNAP23-220ENST00000568841 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
SNAP23-220ENST00000568841 PPP4R3CPQ6ZMV5 832 aa19.62■□□□□ 0.73
SNAP23-220ENST00000568841 CNKSR2Q8WXI2 1034 aa19.2■□□□□ 0.66
SNAP23-220ENST00000568841 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
SNAP23-220ENST00000568841 NISCHQ9Y2I1 1504 aa19.11■□□□□ 0.65
SNAP23-220ENST00000568841 RNF216Q9NWF9 866 aaPredicted RBP19.01■□□□□ 0.63
SNAP23-220ENST00000568841 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
SNAP23-220ENST00000568841 NCBP3Q53F19 620 aaKnown RBP18.8■□□□□ 0.6
SNAP23-220ENST00000568841 NPM3O75607 178 aaKnown RBP18.69■□□□□ 0.58
SNAP23-220ENST00000568841 RNF39Q9H2S5 420 aa18.52■□□□□ 0.56
SNAP23-220ENST00000568841 KCNA4P22459 653 aa18.47■□□□□ 0.55
SNAP23-220ENST00000568841 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
SNAP23-220ENST00000568841 CACNB1Q02641 598 aaPredicted RBP18.38■□□□□ 0.53
SNAP23-220ENST00000568841 C1QBPQ07021 282 aaKnown RBP18.2■□□□□ 0.5
SNAP23-220ENST00000568841 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.492e-7■□□□□ 11.2
SNAP23-220ENST00000568841 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
SNAP23-220ENST00000568841 SLC4A2P04920 1241 aa17.86■□□□□ 0.45
SNAP23-220ENST00000568841 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
SNAP23-220ENST00000568841 CAPN15O75808 1086 aa17.4■□□□□ 0.38
SNAP23-220ENST00000568841 DSG3P32926 999 aa17.39■□□□□ 0.37
SNAP23-220ENST00000568841 SLC4A1APQ9BWU0 796 aaKnown RBP17.38■□□□□ 0.37
SNAP23-220ENST00000568841 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
SNAP23-220ENST00000568841 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
SNAP23-220ENST00000568841 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
SNAP23-220ENST00000568841 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
SNAP23-220ENST00000568841 APLP2Q06481 763 aa17.2■□□□□ 0.34
SNAP23-220ENST00000568841 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
SNAP23-220ENST00000568841 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
SNAP23-220ENST00000568841 FOXD4L1Q9NU39 408 aa17.14■□□□□ 0.33
SNAP23-220ENST00000568841 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
SNAP23-220ENST00000568841 ZBTB22O15209 634 aa17.07■□□□□ 0.32
SNAP23-220ENST00000568841 ABCB7O75027 752 aa17.07■□□□□ 0.32
SNAP23-220ENST00000568841 ABCC9O60706 1549 aa17■□□□□ 0.31
SNAP23-220ENST00000568841 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
SNAP23-220ENST00000568841 POLA2Q14181 598 aa16.79■□□□□ 0.28
SNAP23-220ENST00000568841 ATXN8OSP0DMR3 200 aa16.59■□□□□ 0.25
SNAP23-220ENST00000568841 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
SNAP23-220ENST00000568841 ZBTB12Q9Y330 459 aaPredicted RBP16.4■□□□□ 0.22
SNAP23-220ENST00000568841 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
SNAP23-220ENST00000568841 POTEHQ6S545 545 aa16.36■□□□□ 0.21
SNAP23-220ENST00000568841 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
SNAP23-220ENST00000568841 RB1CC1Q8TDY2 1594 aa16.2■□□□□ 0.18
SNAP23-220ENST00000568841 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
SNAP23-220ENST00000568841 MKRN4PQ13434 485 aaPredicted RBP16.16■□□□□ 0.18
SNAP23-220ENST00000568841 NACADO15069 1562 aa16.15■□□□□ 0.18
SNAP23-220ENST00000568841 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SNAP23-220ENST00000568841 CHRDL2Q6WN34 429 aa16.11■□□□□ 0.17
SNAP23-220ENST00000568841 FBLN2P98095 1184 aa16.05■□□□□ 0.16
SNAP23-220ENST00000568841 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
SNAP23-220ENST00000568841 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.15
SNAP23-220ENST00000568841 SPDYE2BA6NHP3 402 aa15.96■□□□□ 0.15
SNAP23-220ENST00000568841 SPDYE6P0CI01 402 aa15.96■□□□□ 0.15
SNAP23-220ENST00000568841 SPDYE2Q495Y8 402 aa15.96■□□□□ 0.15
SNAP23-220ENST00000568841 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
SNAP23-220ENST00000568841 PITPNM1O00562 1244 aa15.9■□□□□ 0.14
SNAP23-220ENST00000568841 UNC13AQ9UPW8 1703 aa15.89■□□□□ 0.13
SNAP23-220ENST00000568841 ZCCHC6Q5VYS8 1495 aaKnown RBP15.86■□□□□ 0.13
SNAP23-220ENST00000568841 SSUH2Q9Y2M2 353 aa15.86■□□□□ 0.13
SNAP23-220ENST00000568841 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNAP23-220ENST00000568841 BICRAQ9NZM4 1560 aa15.84■□□□□ 0.13
SNAP23-220ENST00000568841 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
SNAP23-220ENST00000568841 PIP4P2Q8N4L2 257 aa15.79■□□□□ 0.12
SNAP23-220ENST00000568841 ZNF692Q9BU19 519 aaPredicted RBP15.76■□□□□ 0.11
SNAP23-220ENST00000568841 FXR2P51116 673 aaKnown RBP eCLIP15.75■□□□□ 0.11
SNAP23-220ENST00000568841 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
SNAP23-220ENST00000568841 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.08
SNAP23-220ENST00000568841 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
SNAP23-220ENST00000568841 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
SNAP23-220ENST00000568841 PRKAR2AP13861 404 aaKnown RBP15.43■□□□□ 0.06
SNAP23-220ENST00000568841 SP7Q8TDD2 431 aaPredicted RBP15.41■□□□□ 0.06
SNAP23-220ENST00000568841 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
SNAP23-220ENST00000568841 EIF4G1Q04637 1599 aaKnown RBP15.38■□□□□ 0.05
SNAP23-220ENST00000568841 HAX1O00165 279 aa15.35■□□□□ 0.05
SNAP23-220ENST00000568841 EVX2Q03828 476 aa15.35■□□□□ 0.05
SNAP23-220ENST00000568841 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
SNAP23-220ENST00000568841 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
SNAP23-220ENST00000568841 CHADLQ6NUI6 762 aa15.32■□□□□ 0.04
SNAP23-220ENST00000568841 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
SNAP23-220ENST00000568841 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
SNAP23-220ENST00000568841 PROM2Q8N271 834 aa15.16■□□□□ 0.02
SNAP23-220ENST00000568841 CREBZFQ9NS37 354 aa15.11■□□□□ 0.01
SNAP23-220ENST00000568841 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
SNAP23-220ENST00000568841 FARP1Q9Y4F1 1045 aaPredicted RBP15.11■□□□□ 0.01
SNAP23-220ENST00000568841 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
SNAP23-220ENST00000568841 GABBR2O75899 941 aa14.94□□□□□ -0.02
SNAP23-220ENST00000568841 CD44P16070 742 aaKnown RBP14.94□□□□□ -0.02
SNAP23-220ENST00000568841 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms