RNA–Protein interactions for RNA: ENST00000568806.1

TNRC6A-214, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 298 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-214ENST00000568806 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
TNRC6A-214ENST00000568806 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
TNRC6A-214ENST00000568806 PHF23Q9BUL5 403 aaPredicted RBP20.63■□□□□ 0.89
TNRC6A-214ENST00000568806 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
TNRC6A-214ENST00000568806 PLPPR3Q6T4P5 718 aa19.04■□□□□ 0.64
TNRC6A-214ENST00000568806 FOXD1Q16676 465 aa18.74■□□□□ 0.59
TNRC6A-214ENST00000568806 ADRA2BP18089 450 aa18.2■□□□□ 0.5
TNRC6A-214ENST00000568806 PPP6R1Q9UPN7 881 aa18.18■□□□□ 0.5
TNRC6A-214ENST00000568806 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
TNRC6A-214ENST00000568806 MSH5O43196 834 aa17.14■□□□□ 0.33
TNRC6A-214ENST00000568806 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
TNRC6A-214ENST00000568806 KCNA4P22459 653 aa16.66■□□□□ 0.26
TNRC6A-214ENST00000568806 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
TNRC6A-214ENST00000568806 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
TNRC6A-214ENST00000568806 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
TNRC6A-214ENST00000568806 CNKSR2Q8WXI2 1034 aa16.29■□□□□ 0.2
TNRC6A-214ENST00000568806 NPM3O75607 178 aaKnown RBP16.2■□□□□ 0.18
TNRC6A-214ENST00000568806 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
TNRC6A-214ENST00000568806 RNF216Q9NWF9 866 aaPredicted RBP15.92■□□□□ 0.14
TNRC6A-214ENST00000568806 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
TNRC6A-214ENST00000568806 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
TNRC6A-214ENST00000568806 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
TNRC6A-214ENST00000568806 DCAF8L1A6NGE4 600 aa15.55■□□□□ 0.08
TNRC6A-214ENST00000568806 DNAJC5BQ9UF47 199 aa15.52■□□□□ 0.08
TNRC6A-214ENST00000568806 POTEDQ86YR6 584 aa15.43■□□□□ 0.06
TNRC6A-214ENST00000568806 ZBTB22O15209 634 aa15.34■□□□□ 0.05
TNRC6A-214ENST00000568806 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
TNRC6A-214ENST00000568806 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
TNRC6A-214ENST00000568806 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
TNRC6A-214ENST00000568806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
TNRC6A-214ENST00000568806 MYCNP04198 464 aaPredicted RBP14.94□□□□□ -0.02
TNRC6A-214ENST00000568806 U3KPZ7 1027 aaPredicted RBP14.91□□□□□ -0.02
TNRC6A-214ENST00000568806 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
TNRC6A-214ENST00000568806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
TNRC6A-214ENST00000568806 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
TNRC6A-214ENST00000568806 SAMD1Q6SPF0 538 aaPredicted RBP14.66□□□□□ -0.06
TNRC6A-214ENST00000568806 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
TNRC6A-214ENST00000568806 ATXN8OSP0DMR3 200 aa14.61□□□□□ -0.07
TNRC6A-214ENST00000568806 C1QBPQ07021 282 aaKnown RBP14.52□□□□□ -0.09
TNRC6A-214ENST00000568806 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
TNRC6A-214ENST00000568806 APLP2Q06481 763 aa14.48□□□□□ -0.09
TNRC6A-214ENST00000568806 CAPN15O75808 1086 aa14.43□□□□□ -0.1
TNRC6A-214ENST00000568806 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
TNRC6A-214ENST00000568806 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
TNRC6A-214ENST00000568806 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
TNRC6A-214ENST00000568806 ABCB7O75027 752 aa14.21□□□□□ -0.13
TNRC6A-214ENST00000568806 POLA2Q14181 598 aa14.17□□□□□ -0.14
TNRC6A-214ENST00000568806 DSG3P32926 999 aa14.09□□□□□ -0.15
TNRC6A-214ENST00000568806 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
TNRC6A-214ENST00000568806 FBLN2P98095 1184 aa13.92□□□□□ -0.18
TNRC6A-214ENST00000568806 FKBP8Q14318 412 aa13.9□□□□□ -0.18
TNRC6A-214ENST00000568806 ZBTB12Q9Y330 459 aaPredicted RBP13.85□□□□□ -0.19
TNRC6A-214ENST00000568806 OSCARQ8IYS5 282 aa13.71□□□□□ -0.21
TNRC6A-214ENST00000568806 SPDYE4A6NLX3 237 aa13.7□□□□□ -0.22
TNRC6A-214ENST00000568806 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
TNRC6A-214ENST00000568806 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
TNRC6A-214ENST00000568806 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
TNRC6A-214ENST00000568806 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
TNRC6A-214ENST00000568806 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
TNRC6A-214ENST00000568806 PROM2Q8N271 834 aa13.41□□□□□ -0.26
TNRC6A-214ENST00000568806 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
TNRC6A-214ENST00000568806 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
TNRC6A-214ENST00000568806 FBXO3Q9UK99 471 aa13.27□□□□□ -0.29
TNRC6A-214ENST00000568806 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
TNRC6A-214ENST00000568806 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
TNRC6A-214ENST00000568806 VASPP50552 380 aaPredicted RBP13.14□□□□□ -0.31
TNRC6A-214ENST00000568806 CLEC11AQ9Y240 323 aa13.13□□□□□ -0.31
TNRC6A-214ENST00000568806 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
TNRC6A-214ENST00000568806 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
TNRC6A-214ENST00000568806 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
TNRC6A-214ENST00000568806 MIER1Q8N108 512 aa13.01□□□□□ -0.33
TNRC6A-214ENST00000568806 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
TNRC6A-214ENST00000568806 PRR29P0C7W0 189 aa12.98□□□□□ -0.33
TNRC6A-214ENST00000568806 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
TNRC6A-214ENST00000568806 KLHL34Q8N239 644 aa12.93□□□□□ -0.34
TNRC6A-214ENST00000568806 RTN4Q9NQC3 1192 aaKnown RBP12.91□□□□□ -0.34
TNRC6A-214ENST00000568806 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
TNRC6A-214ENST00000568806 AMER1Q5JTC6 1135 aaPredicted RBP12.85□□□□□ -0.35
TNRC6A-214ENST00000568806 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
TNRC6A-214ENST00000568806 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
TNRC6A-214ENST00000568806 CHRDL2Q6WN34 429 aa12.81□□□□□ -0.36
TNRC6A-214ENST00000568806 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
TNRC6A-214ENST00000568806 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
TNRC6A-214ENST00000568806 PRKAR2AP13861 404 aaKnown RBP12.72□□□□□ -0.37
TNRC6A-214ENST00000568806 FXR2P51116 673 aaKnown RBP eCLIP12.71□□□□□ -0.37
TNRC6A-214ENST00000568806 PIP4P2Q8N4L2 257 aa12.71□□□□□ -0.37
TNRC6A-214ENST00000568806 MNX1P50219 401 aaPredicted RBP12.7□□□□□ -0.38
TNRC6A-214ENST00000568806 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
TNRC6A-214ENST00000568806 FARP1Q9Y4F1 1045 aaPredicted RBP12.62□□□□□ -0.39
TNRC6A-214ENST00000568806 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
TNRC6A-214ENST00000568806 NUBP1P53384 320 aa12.61□□□□□ -0.39
TNRC6A-214ENST00000568806 PKD2Q13563 968 aa12.6□□□□□ -0.39
TNRC6A-214ENST00000568806 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
TNRC6A-214ENST00000568806 DCAF8Q5TAQ9 597 aa12.56□□□□□ -0.4
TNRC6A-214ENST00000568806 ECM2O94769 699 aaPredicted RBP12.52□□□□□ -0.41
TNRC6A-214ENST00000568806 FAM212AQ96EL1 285 aa12.51□□□□□ -0.41
TNRC6A-214ENST00000568806 GSE1Q14687 1217 aa12.49□□□□□ -0.41
TNRC6A-214ENST00000568806 TSPYL2Q9H2G4 693 aaPredicted RBP12.49□□□□□ -0.41
TNRC6A-214ENST00000568806 DCAF8L2P0C7V8 631 aa12.47□□□□□ -0.41
TNRC6A-214ENST00000568806 RGL2O15211 777 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms