RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
FANCA-230ENST00000568369 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.48
FANCA-230ENST00000568369 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
FANCA-230ENST00000568369 SHROOM4Q9ULL8 1493 aa17.28■□□□□ 0.36
FANCA-230ENST00000568369 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
FANCA-230ENST00000568369 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
FANCA-230ENST00000568369 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
FANCA-230ENST00000568369 FAM9AQ8IZU1 332 aaPredicted RBP16.53■□□□□ 0.24
FANCA-230ENST00000568369 APLP2Q06481 763 aa16.52■□□□□ 0.24
FANCA-230ENST00000568369 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
FANCA-230ENST00000568369 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
FANCA-230ENST00000568369 TTBK1Q5TCY1 1321 aaPredicted RBP16.29■□□□□ 0.2
FANCA-230ENST00000568369 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.19
FANCA-230ENST00000568369 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
FANCA-230ENST00000568369 HRCP23327 699 aa16.04■□□□□ 0.16
FANCA-230ENST00000568369 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
FANCA-230ENST00000568369 UBTFP17480 764 aaKnown RBP16.02■□□□□ 0.16
FANCA-230ENST00000568369 RANGAP1P46060 587 aaPredicted RBP16.01■□□□□ 0.15
FANCA-230ENST00000568369 CHIC1Q5VXU3 224 aa15.95■□□□□ 0.14
FANCA-230ENST00000568369 PPARGC1BQ86YN6 1023 aaKnown RBP15.85■□□□□ 0.13
FANCA-230ENST00000568369 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
FANCA-230ENST00000568369 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
FANCA-230ENST00000568369 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
FANCA-230ENST00000568369 MYT1Q01538 1121 aa15.8■□□□□ 0.12
FANCA-230ENST00000568369 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
FANCA-230ENST00000568369 NEFLP07196 543 aa15.75■□□□□ 0.11
FANCA-230ENST00000568369 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.07
FANCA-230ENST00000568369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
FANCA-230ENST00000568369 ITGAEP38570 1179 aa15.47■□□□□ 0.07
FANCA-230ENST00000568369 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
FANCA-230ENST00000568369 POLR3GLQ9BT43 218 aa15.21■□□□□ 0.03
FANCA-230ENST00000568369 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
FANCA-230ENST00000568369 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
FANCA-230ENST00000568369 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
FANCA-230ENST00000568369 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
FANCA-230ENST00000568369 ABCC9O60706 1549 aa15.1■□□□□ 0.01
FANCA-230ENST00000568369 CNGB1Q14028 1251 aaPredicted RBP15.08■□□□□ 0
FANCA-230ENST00000568369 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
FANCA-230ENST00000568369 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
FANCA-230ENST00000568369 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -01e-7■■■■□ 21.8
FANCA-230ENST00000568369 NEUROD1Q13562 356 aa15.02□□□□□ -0.01
FANCA-230ENST00000568369 CSRNP3Q8WYN3 585 aa15.02□□□□□ -0.01
FANCA-230ENST00000568369 MYT1LQ9UL68 1186 aa15□□□□□ -0.01
FANCA-230ENST00000568369 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
FANCA-230ENST00000568369 ANP32CO43423 234 aa14.97□□□□□ -0.01
FANCA-230ENST00000568369 TRIM52Q96A61 297 aa14.96□□□□□ -0.01
FANCA-230ENST00000568369 RTL5Q5HYW3 569 aaPredicted RBP14.96□□□□□ -0.02
FANCA-230ENST00000568369 BCANQ96GW7 911 aa14.94□□□□□ -0.02
FANCA-230ENST00000568369 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
FANCA-230ENST00000568369 CLSPNQ9HAW4 1339 aa14.83□□□□□ -0.04
FANCA-230ENST00000568369 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
FANCA-230ENST00000568369 ZNF326Q5BKZ1 582 aaKnown RBP14.76□□□□□ -0.05
FANCA-230ENST00000568369 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
FANCA-230ENST00000568369 P3H3Q8IVL6 736 aa14.72□□□□□ -0.05
FANCA-230ENST00000568369 MYO15BQ96JP2 1530 aa14.69□□□□□ -0.06
FANCA-230ENST00000568369 CCDC180Q9P1Z9 1646 aa14.66□□□□□ -0.06
FANCA-230ENST00000568369 SCAF1Q9H7N4 1312 aaKnown RBP14.63□□□□□ -0.07
FANCA-230ENST00000568369 FKBP8Q14318 412 aa14.63□□□□□ -0.07
FANCA-230ENST00000568369 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
FANCA-230ENST00000568369 DDX10Q13206 875 aaKnown RBP14.6□□□□□ -0.07
FANCA-230ENST00000568369 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
FANCA-230ENST00000568369 FBLN2P98095 1184 aa14.56□□□□□ -0.08
FANCA-230ENST00000568369 HNRNPUQ00839 825 aaKnown RBP eCLIP14.56□□□□□ -0.08
FANCA-230ENST00000568369 ARID3CA6NKF2 412 aa14.55□□□□□ -0.08
FANCA-230ENST00000568369 MIER1Q8N108 512 aa14.55□□□□□ -0.08
FANCA-230ENST00000568369 RSF1Q96T23 1441 aaPredicted RBP14.53□□□□□ -0.08
FANCA-230ENST00000568369 CLIP1P30622 1438 aa14.52□□□□□ -0.09
FANCA-230ENST00000568369 EEA1Q15075 1411 aa14.5□□□□□ -0.09
FANCA-230ENST00000568369 CANXP27824 592 aaKnown RBP14.5□□□□□ -0.09
FANCA-230ENST00000568369 ZNF777Q9ULD5 760 aaPredicted RBP14.5□□□□□ -0.09
FANCA-230ENST00000568369 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
FANCA-230ENST00000568369 CEP162Q5TB80 1403 aa14.46□□□□□ -0.09
FANCA-230ENST00000568369 FAM9BQ8IZU0 186 aa14.46□□□□□ -0.09
FANCA-230ENST00000568369 NPM2Q86SE8 214 aaKnown RBP14.43□□□□□ -0.1
FANCA-230ENST00000568369 GOLGA3Q08378 1498 aa14.43□□□□□ -0.1
FANCA-230ENST00000568369 NEFMP07197 916 aa14.39□□□□□ -0.11
FANCA-230ENST00000568369 CHIC2Q9UKJ5 165 aa14.38□□□□□ -0.11
FANCA-230ENST00000568369 TNIKQ9UKE5 1360 aa14.38□□□□□ -0.11
FANCA-230ENST00000568369 MTUS2Q5JR59 1369 aa14.37□□□□□ -0.11
FANCA-230ENST00000568369 MRS2Q9HD23 443 aa14.37□□□□□ -0.11
FANCA-230ENST00000568369 CCDC136Q96JN2 1154 aa14.37□□□□□ -0.11
FANCA-230ENST00000568369 TMC1Q8TDI8 760 aa14.36□□□□□ -0.11
FANCA-230ENST00000568369 HIRIP3Q9BW71 556 aaPredicted RBP14.33□□□□□ -0.12
FANCA-230ENST00000568369 WRNQ14191 1432 aaPredicted RBP eCLIP14.33□□□□□ -0.12
FANCA-230ENST00000568369 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
FANCA-230ENST00000568369 SALL2Q9Y467 1007 aaPredicted RBP14.3□□□□□ -0.12
FANCA-230ENST00000568369 BCL11AQ9H165 835 aa14.28□□□□□ -0.12
FANCA-230ENST00000568369 CEP164Q9UPV0 1460 aa14.28□□□□□ -0.12
FANCA-230ENST00000568369 RB1CC1Q8TDY2 1594 aa14.27□□□□□ -0.12
FANCA-230ENST00000568369 UPF2Q9HAU5 1272 aaKnown RBP14.26□□□□□ -0.13
FANCA-230ENST00000568369 IRX6P78412 446 aaPredicted RBP14.26□□□□□ -0.13
FANCA-230ENST00000568369 TSPY4P0CV99 314 aa14.25□□□□□ -0.13
FANCA-230ENST00000568369 TSPY10P0CW01 314 aa14.25□□□□□ -0.13
FANCA-230ENST00000568369 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.24□□□□□ -0.13
FANCA-230ENST00000568369 NACADO15069 1562 aa14.22□□□□□ -0.13
FANCA-230ENST00000568369 NBR1Q14596 966 aa14.22□□□□□ -0.13
FANCA-230ENST00000568369 RRP7BPQ9NSQ0 103 aa14.22□□□□□ -0.13
FANCA-230ENST00000568369 KDM2AQ9Y2K7 1162 aa14.21□□□□□ -0.14
FANCA-230ENST00000568369 KIF27Q86VH2 1401 aa14.2□□□□□ -0.14
FANCA-230ENST00000568369 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms