RNA–Protein interactions for RNA: ENST00000567695.5

CDIP1-209, Transcript of cell death inducing p53 target 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDIP1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-209ENST00000567695 NISCHQ9Y2I1 1504 aa33.5■■■□□ 2.95
CDIP1-209ENST00000567695 CCDC180Q9P1Z9 1646 aa28.59■■■□□ 2.17
CDIP1-209ENST00000567695 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
CDIP1-209ENST00000567695 SHROOM4Q9ULL8 1493 aa28.25■■■□□ 2.11
CDIP1-209ENST00000567695 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
CDIP1-209ENST00000567695 DCAF1Q9Y4B6 1507 aa27.64■■■□□ 2.02
CDIP1-209ENST00000567695 DCAF8L2P0C7V8 631 aa27.46■■□□□ 1.99
CDIP1-209ENST00000567695 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
CDIP1-209ENST00000567695 MYO15BQ96JP2 1530 aa26.89■■□□□ 1.9
CDIP1-209ENST00000567695 ABCC9O60706 1549 aa26.75■■□□□ 1.87
CDIP1-209ENST00000567695 SCRIBQ14160 1630 aa26.58■■□□□ 1.85
CDIP1-209ENST00000567695 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
CDIP1-209ENST00000567695 NACADO15069 1562 aa26.42■■□□□ 1.82
CDIP1-209ENST00000567695 HRCP23327 699 aa26.23■■□□□ 1.79
CDIP1-209ENST00000567695 RB1CC1Q8TDY2 1594 aa26.22■■□□□ 1.79
CDIP1-209ENST00000567695 LOC105371045A0A1W2PR82 267 aa26.13■■□□□ 1.77
CDIP1-209ENST00000567695 PCGF6Q9BYE7 350 aa26.1■■□□□ 1.77
CDIP1-209ENST00000567695 CECR2Q9BXF3 1484 aa26■■□□□ 1.75
CDIP1-209ENST00000567695 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
CDIP1-209ENST00000567695 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
CDIP1-209ENST00000567695 WIZO95785 1651 aa25.79■■□□□ 1.72
CDIP1-209ENST00000567695 TRIM26Q12899 539 aaPredicted RBP25.78■■□□□ 1.72
CDIP1-209ENST00000567695 BAZ1AQ9NRL2 1556 aaPredicted RBP25.76■■□□□ 1.71
CDIP1-209ENST00000567695 FAM9AQ8IZU1 332 aaPredicted RBP25.56■■□□□ 1.68
CDIP1-209ENST00000567695 EIF4G1Q04637 1599 aaKnown RBP25.55■■□□□ 1.68
CDIP1-209ENST00000567695 TOP2AP11388 1531 aaKnown RBP25.52■■□□□ 1.68
CDIP1-209ENST00000567695 SMARCA4P51532 1647 aa25.5■■□□□ 1.67
CDIP1-209ENST00000567695 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
CDIP1-209ENST00000567695 UNC13AQ9UPW8 1703 aa25.44■■□□□ 1.66
CDIP1-209ENST00000567695 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
CDIP1-209ENST00000567695 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
CDIP1-209ENST00000567695 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
CDIP1-209ENST00000567695 EHMT2Q96KQ7 1210 aa25.2■■□□□ 1.62
CDIP1-209ENST00000567695 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
CDIP1-209ENST00000567695 ABCC8Q09428 1581 aa25.16■■□□□ 1.62
CDIP1-209ENST00000567695 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
CDIP1-209ENST00000567695 EEA1Q15075 1411 aa25.05■■□□□ 1.6
CDIP1-209ENST00000567695 PABPN1Q86U42 306 aaKnown RBP eCLIP25.01■■□□□ 1.59
CDIP1-209ENST00000567695 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
CDIP1-209ENST00000567695 SOGA1O94964 1423 aa24.94■■□□□ 1.58
CDIP1-209ENST00000567695 TNIKQ9UKE5 1360 aa24.93■■□□□ 1.58
CDIP1-209ENST00000567695 CEP162Q5TB80 1403 aa24.89■■□□□ 1.58
CDIP1-209ENST00000567695 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
CDIP1-209ENST00000567695 ATAD2BQ9ULI0 1458 aa24.85■■□□□ 1.57
CDIP1-209ENST00000567695 GOLGA3Q08378 1498 aa24.78■■□□□ 1.56
CDIP1-209ENST00000567695 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
CDIP1-209ENST00000567695 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CDIP1-209ENST00000567695 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
CDIP1-209ENST00000567695 UBTFP17480 764 aaKnown RBP24.68■■□□□ 1.54
CDIP1-209ENST00000567695 CEP164Q9UPV0 1460 aa24.66■■□□□ 1.54
CDIP1-209ENST00000567695 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
CDIP1-209ENST00000567695 KIF21BO75037 1637 aa24.65■■□□□ 1.54
CDIP1-209ENST00000567695 CCER1Q8TC90 406 aaPredicted RBP24.6■■□□□ 1.53
CDIP1-209ENST00000567695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.59■■□□□ 1.53
CDIP1-209ENST00000567695 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
CDIP1-209ENST00000567695 CLIP1P30622 1438 aa24.45■■□□□ 1.5
CDIP1-209ENST00000567695 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
CDIP1-209ENST00000567695 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
CDIP1-209ENST00000567695 NCAPD3P42695 1498 aa24.42■■□□□ 1.5
CDIP1-209ENST00000567695 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
CDIP1-209ENST00000567695 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
CDIP1-209ENST00000567695 RAPGEF2Q9Y4G8 1499 aa24.37■■□□□ 1.49
CDIP1-209ENST00000567695 ERICH3Q5RHP9 1530 aa24.28■■□□□ 1.48
CDIP1-209ENST00000567695 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
CDIP1-209ENST00000567695 APLP2Q06481 763 aa24.21■■□□□ 1.47
CDIP1-209ENST00000567695 CFTRP13569 1480 aa24.2■■□□□ 1.46
CDIP1-209ENST00000567695 CUX1P39880 1505 aa24.19■■□□□ 1.46
CDIP1-209ENST00000567695 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
CDIP1-209ENST00000567695 DIEXFQ68CQ4 756 aaKnown RBP24.12■■□□□ 1.45
CDIP1-209ENST00000567695 HNRNPUL2Q1KMD3 747 aaKnown RBP24.06■■□□□ 1.44
CDIP1-209ENST00000567695 SCAF1Q9H7N4 1312 aaKnown RBP24.06■■□□□ 1.44
CDIP1-209ENST00000567695 ARAP1Q96P48 1450 aa24.06■■□□□ 1.44
CDIP1-209ENST00000567695 PRDM2Q13029 1718 aa24.02■■□□□ 1.44
CDIP1-209ENST00000567695 RANGAP1P46060 587 aaPredicted RBP24.01■■□□□ 1.43
CDIP1-209ENST00000567695 ZNF316A6NFI3 1004 aaPredicted RBP24■■□□□ 1.43
CDIP1-209ENST00000567695 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
CDIP1-209ENST00000567695 CC2D2AQ9P2K1 1620 aa23.92■■□□□ 1.42
CDIP1-209ENST00000567695 CADPSQ9ULU8 1353 aa23.91■■□□□ 1.42
CDIP1-209ENST00000567695 DNAJC5BQ9UF47 199 aa23.89■■□□□ 1.41
CDIP1-209ENST00000567695 CENPBP07199 599 aaPredicted RBP23.87■■□□□ 1.41
CDIP1-209ENST00000567695 CLSPNQ9HAW4 1339 aa23.86■■□□□ 1.41
CDIP1-209ENST00000567695 ARHGAP35Q9NRY4 1499 aa23.85■■□□□ 1.41
CDIP1-209ENST00000567695 CUX2O14529 1486 aa23.83■■□□□ 1.41
CDIP1-209ENST00000567695 RRBP1Q9P2E9 1410 aaKnown RBP23.83■■□□□ 1.4
CDIP1-209ENST00000567695 IGF1RP08069 1367 aa23.82■■□□□ 1.4
CDIP1-209ENST00000567695 NEUROD1Q13562 356 aa23.81■■□□□ 1.4
CDIP1-209ENST00000567695 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
CDIP1-209ENST00000567695 FGD5Q6ZNL6 1462 aa23.76■■□□□ 1.39
CDIP1-209ENST00000567695 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
CDIP1-209ENST00000567695 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
CDIP1-209ENST00000567695 MYT1Q01538 1121 aa23.72■■□□□ 1.39
CDIP1-209ENST00000567695 MAP3K1Q13233 1512 aa23.72■■□□□ 1.39
CDIP1-209ENST00000567695 CCNB3Q8WWL7 1395 aa23.69■■□□□ 1.38
CDIP1-209ENST00000567695 FANCD2Q9BXW9 1451 aa23.65■■□□□ 1.38
CDIP1-209ENST00000567695 TIAM1Q13009 1591 aa23.62■■□□□ 1.37
CDIP1-209ENST00000567695 DNMBPQ6XZF7 1577 aa23.6■■□□□ 1.37
CDIP1-209ENST00000567695 FHAD1B1AJZ9 1412 aa23.57■■□□□ 1.36
CDIP1-209ENST00000567695 GTF3C3Q9Y5Q9 886 aa23.57■■□□□ 1.36
CDIP1-209ENST00000567695 ABCA10Q8WWZ4 1543 aa23.56■■□□□ 1.36
CDIP1-209ENST00000567695 MIER1Q8N108 512 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms