RNA–Protein interactions for RNA: ENST00000567323.2

DENND4A-207, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 804 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-207ENST00000567323 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
DENND4A-207ENST00000567323 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
DENND4A-207ENST00000567323 PHF23Q9BUL5 403 aaPredicted RBP24.11■■□□□ 1.45
DENND4A-207ENST00000567323 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
DENND4A-207ENST00000567323 FOXD1Q16676 465 aa22.14■■□□□ 1.13
DENND4A-207ENST00000567323 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
DENND4A-207ENST00000567323 PPP6R1Q9UPN7 881 aa21.32■■□□□ 1
DENND4A-207ENST00000567323 ADRA2BP18089 450 aa21.26■□□□□ 0.99
DENND4A-207ENST00000567323 PIAS4Q8N2W9 510 aaPredicted RBP20.81■□□□□ 0.92
DENND4A-207ENST00000567323 MSH5O43196 834 aa20.34■□□□□ 0.85
DENND4A-207ENST00000567323 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
DENND4A-207ENST00000567323 MAPK8IP2Q13387 824 aaPredicted RBP19.33■□□□□ 0.68
DENND4A-207ENST00000567323 SCAF1Q9H7N4 1312 aaKnown RBP19.31■□□□□ 0.68
DENND4A-207ENST00000567323 KCNA4P22459 653 aa19.06■□□□□ 0.64
DENND4A-207ENST00000567323 DMRT2Q9Y5R5 561 aa18.98■□□□□ 0.63
DENND4A-207ENST00000567323 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
DENND4A-207ENST00000567323 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
DENND4A-207ENST00000567323 NPM3O75607 178 aaKnown RBP18.75■□□□□ 0.59
DENND4A-207ENST00000567323 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
DENND4A-207ENST00000567323 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
DENND4A-207ENST00000567323 HOXD11P31277 338 aaPredicted RBP18.58■□□□□ 0.56
DENND4A-207ENST00000567323 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
DENND4A-207ENST00000567323 DCAF8L1A6NGE4 600 aa18.15■□□□□ 0.5
DENND4A-207ENST00000567323 SLC4A1APQ9BWU0 796 aaKnown RBP18.08■□□□□ 0.48
DENND4A-207ENST00000567323 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
DENND4A-207ENST00000567323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.67■□□□□ 0.42
DENND4A-207ENST00000567323 ZBTB22O15209 634 aa17.57■□□□□ 0.4
DENND4A-207ENST00000567323 EHMT2Q96KQ7 1210 aa17.53■□□□□ 0.4
DENND4A-207ENST00000567323 FOXD4L1Q9NU39 408 aa17.49■□□□□ 0.39
DENND4A-207ENST00000567323 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
DENND4A-207ENST00000567323 U3KPZ7 1027 aaPredicted RBP17.43■□□□□ 0.38
DENND4A-207ENST00000567323 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
DENND4A-207ENST00000567323 MYCNP04198 464 aaPredicted RBP17.26■□□□□ 0.35
DENND4A-207ENST00000567323 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
DENND4A-207ENST00000567323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.07■□□□□ 0.32
DENND4A-207ENST00000567323 HNRNPUL2Q1KMD3 747 aaKnown RBP17.07■□□□□ 0.32
DENND4A-207ENST00000567323 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
DENND4A-207ENST00000567323 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
DENND4A-207ENST00000567323 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
DENND4A-207ENST00000567323 ATF5Q9Y2D1 282 aaPredicted RBP16.93■□□□□ 0.3
DENND4A-207ENST00000567323 APLP2Q06481 763 aa16.87■□□□□ 0.29
DENND4A-207ENST00000567323 ATXN8OSP0DMR3 200 aa16.86■□□□□ 0.29
DENND4A-207ENST00000567323 CAPN15O75808 1086 aa16.85■□□□□ 0.29
DENND4A-207ENST00000567323 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
DENND4A-207ENST00000567323 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
DENND4A-207ENST00000567323 DSG3P32926 999 aa16.63■□□□□ 0.25
DENND4A-207ENST00000567323 ABCB7O75027 752 aa16.58■□□□□ 0.24
DENND4A-207ENST00000567323 POLA2Q14181 598 aa16.51■□□□□ 0.23
DENND4A-207ENST00000567323 MKRN4PQ13434 485 aaPredicted RBP16.17■□□□□ 0.18
DENND4A-207ENST00000567323 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
DENND4A-207ENST00000567323 FBLN2P98095 1184 aa16.07■□□□□ 0.16
DENND4A-207ENST00000567323 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
DENND4A-207ENST00000567323 RBM42Q9BTD8 480 aaKnown RBP15.75■□□□□ 0.11
DENND4A-207ENST00000567323 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
DENND4A-207ENST00000567323 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
DENND4A-207ENST00000567323 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
DENND4A-207ENST00000567323 SPDYE4A6NLX3 237 aa15.7■□□□□ 0.1
DENND4A-207ENST00000567323 FKBP8Q14318 412 aa15.69■□□□□ 0.1
DENND4A-207ENST00000567323 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
DENND4A-207ENST00000567323 SSUH2Q9Y2M2 353 aa15.65■□□□□ 0.1
DENND4A-207ENST00000567323 AKT1S1Q96B36 256 aa15.59■□□□□ 0.09
DENND4A-207ENST00000567323 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
DENND4A-207ENST00000567323 REM2Q8IYK8 340 aaPredicted RBP15.48■□□□□ 0.07
DENND4A-207ENST00000567323 PROM2Q8N271 834 aa15.47■□□□□ 0.07
DENND4A-207ENST00000567323 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
DENND4A-207ENST00000567323 SPDYE1Q8NFV5 336 aaPredicted RBP15.28■□□□□ 0.04
DENND4A-207ENST00000567323 CLEC11AQ9Y240 323 aa15.25■□□□□ 0.03
DENND4A-207ENST00000567323 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
DENND4A-207ENST00000567323 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
DENND4A-207ENST00000567323 PRR29P0C7W0 189 aa15.08■□□□□ 0
DENND4A-207ENST00000567323 FBXO3Q9UK99 471 aa15.06■□□□□ 0
DENND4A-207ENST00000567323 FXR2P51116 673 aaKnown RBP eCLIP15.03■□□□□ -0
DENND4A-207ENST00000567323 PIP4P2Q8N4L2 257 aa14.99□□□□□ -0.01
DENND4A-207ENST00000567323 CHADLQ6NUI6 762 aa14.94□□□□□ -0.02
DENND4A-207ENST00000567323 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
DENND4A-207ENST00000567323 VASPP50552 380 aaPredicted RBP14.92□□□□□ -0.02
DENND4A-207ENST00000567323 PRKAR2AP13861 404 aaKnown RBP14.9□□□□□ -0.02
DENND4A-207ENST00000567323 MIER1Q8N108 512 aa14.89□□□□□ -0.03
DENND4A-207ENST00000567323 PLCD3Q8N3E9 789 aa14.84□□□□□ -0.03
DENND4A-207ENST00000567323 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
DENND4A-207ENST00000567323 POTEHQ6S545 545 aa14.78□□□□□ -0.04
DENND4A-207ENST00000567323 IFNLR1Q8IU57 520 aaPredicted RBP14.77□□□□□ -0.05
DENND4A-207ENST00000567323 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
DENND4A-207ENST00000567323 PLEKHG5O94827 1062 aa14.72□□□□□ -0.05
DENND4A-207ENST00000567323 KLHL34Q8N239 644 aa14.65□□□□□ -0.06
DENND4A-207ENST00000567323 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
DENND4A-207ENST00000567323 NPM1P06748 294 aaKnown RBP eCLIP14.6□□□□□ -0.07
DENND4A-207ENST00000567323 NUBP1P53384 320 aa14.56□□□□□ -0.08
DENND4A-207ENST00000567323 SPOCK2Q92563 424 aa14.53□□□□□ -0.08
DENND4A-207ENST00000567323 RASEFQ8IZ41 740 aa14.52□□□□□ -0.09
DENND4A-207ENST00000567323 C19orf67A6NJJ6 358 aa14.51□□□□□ -0.09
DENND4A-207ENST00000567323 HAX1O00165 279 aa14.5□□□□□ -0.09
DENND4A-207ENST00000567323 EVX2Q03828 476 aa14.48□□□□□ -0.09
DENND4A-207ENST00000567323 CD44P16070 742 aaKnown RBP14.46□□□□□ -0.09
DENND4A-207ENST00000567323 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
DENND4A-207ENST00000567323 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
DENND4A-207ENST00000567323 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
DENND4A-207ENST00000567323 FAM212AQ96EL1 285 aa14.36□□□□□ -0.11
DENND4A-207ENST00000567323 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
DENND4A-207ENST00000567323 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms