RNA–Protein interactions for RNA: ENST00000567269.5

CDH16-206, Transcript of cadherin 16, humanhuman

TSL 2

Gene CDH16, Length 3,539 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-206ENST00000567269 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
CDH16-206ENST00000567269 DCAF8L2P0C7V8 631 aa21.94■■□□□ 1.1
CDH16-206ENST00000567269 SHROOM4Q9ULL8 1493 aa21.91■■□□□ 1.1
CDH16-206ENST00000567269 CCDC180Q9P1Z9 1646 aa21.75■■□□□ 1.07
CDH16-206ENST00000567269 ZCCHC6Q5VYS8 1495 aaKnown RBP21.48■■□□□ 1.03
CDH16-206ENST00000567269 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
CDH16-206ENST00000567269 ABCC9O60706 1549 aa20.88■□□□□ 0.93
CDH16-206ENST00000567269 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
CDH16-206ENST00000567269 SCRIBQ14160 1630 aa20.58■□□□□ 0.88
CDH16-206ENST00000567269 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
CDH16-206ENST00000567269 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
CDH16-206ENST00000567269 NACADO15069 1562 aa20.34■□□□□ 0.85
CDH16-206ENST00000567269 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
CDH16-206ENST00000567269 RSF1Q96T23 1441 aaPredicted RBP20.14■□□□□ 0.81
CDH16-206ENST00000567269 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
CDH16-206ENST00000567269 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
CDH16-206ENST00000567269 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
CDH16-206ENST00000567269 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
CDH16-206ENST00000567269 LOC105371045A0A1W2PR82 267 aa19.86■□□□□ 0.77
CDH16-206ENST00000567269 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.76
CDH16-206ENST00000567269 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
CDH16-206ENST00000567269 WIZO95785 1651 aa19.73■□□□□ 0.75
CDH16-206ENST00000567269 BAZ1AQ9NRL2 1556 aaPredicted RBP19.69■□□□□ 0.74
CDH16-206ENST00000567269 UNC13AQ9UPW8 1703 aa19.61■□□□□ 0.73
CDH16-206ENST00000567269 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
CDH16-206ENST00000567269 PCGF6Q9BYE7 350 aa19.51■□□□□ 0.71
CDH16-206ENST00000567269 BICRAQ9NZM4 1560 aa19.47■□□□□ 0.71
CDH16-206ENST00000567269 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
CDH16-206ENST00000567269 TOP2AP11388 1531 aaKnown RBP19.39■□□□□ 0.69
CDH16-206ENST00000567269 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
CDH16-206ENST00000567269 ABCC8Q09428 1581 aa19.24■□□□□ 0.67
CDH16-206ENST00000567269 BAZ1BQ9UIG0 1483 aaKnown RBP19.21■□□□□ 0.67
CDH16-206ENST00000567269 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
CDH16-206ENST00000567269 PPARGC1BQ86YN6 1023 aaKnown RBP19.14■□□□□ 0.65
CDH16-206ENST00000567269 TRIM26Q12899 539 aaPredicted RBP19.11■□□□□ 0.65
CDH16-206ENST00000567269 UBTFP17480 764 aaKnown RBP19.08■□□□□ 0.65
CDH16-206ENST00000567269 EIF4G1Q04637 1599 aaKnown RBP19.05■□□□□ 0.64
CDH16-206ENST00000567269 HRCP23327 699 aa19.04■□□□□ 0.64
CDH16-206ENST00000567269 PEG3Q9GZU2 1588 aa19.03■□□□□ 0.64
CDH16-206ENST00000567269 SOGA1O94964 1423 aa19.03■□□□□ 0.64
CDH16-206ENST00000567269 WRNQ14191 1432 aaPredicted RBP eCLIP19.02■□□□□ 0.64
CDH16-206ENST00000567269 TTBK1Q5TCY1 1321 aaPredicted RBP19.02■□□□□ 0.64
CDH16-206ENST00000567269 CSRNP3Q8WYN3 585 aa19■□□□□ 0.63
CDH16-206ENST00000567269 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
CDH16-206ENST00000567269 RUSC2Q8N2Y8 1516 aa18.92■□□□□ 0.62
CDH16-206ENST00000567269 NCAPD3P42695 1498 aa18.86■□□□□ 0.61
CDH16-206ENST00000567269 EEA1Q15075 1411 aa18.8■□□□□ 0.6
CDH16-206ENST00000567269 SYNJ1O43426 1573 aa18.79■□□□□ 0.6
CDH16-206ENST00000567269 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
CDH16-206ENST00000567269 HMGXB3Q12766 1538 aa18.74■□□□□ 0.59
CDH16-206ENST00000567269 TNIKQ9UKE5 1360 aa18.72■□□□□ 0.59
CDH16-206ENST00000567269 GOLGA3Q08378 1498 aa18.7■□□□□ 0.58
CDH16-206ENST00000567269 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
CDH16-206ENST00000567269 APLP2Q06481 763 aa18.63■□□□□ 0.57
CDH16-206ENST00000567269 CC2D2AQ9P2K1 1620 aa18.62■□□□□ 0.57
CDH16-206ENST00000567269 CFTRP13569 1480 aa18.6■□□□□ 0.57
CDH16-206ENST00000567269 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.57
CDH16-206ENST00000567269 RAPGEF2Q9Y4G8 1499 aa18.56■□□□□ 0.56
CDH16-206ENST00000567269 TOP2BQ02880 1626 aa18.55■□□□□ 0.56
CDH16-206ENST00000567269 CLIP1P30622 1438 aa18.55■□□□□ 0.56
CDH16-206ENST00000567269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
CDH16-206ENST00000567269 CCER1Q8TC90 406 aaPredicted RBP18.52■□□□□ 0.56
CDH16-206ENST00000567269 CUX1P39880 1505 aa18.52■□□□□ 0.56
CDH16-206ENST00000567269 ZEB1P37275 1124 aaPredicted RBP18.51■□□□□ 0.55
CDH16-206ENST00000567269 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
CDH16-206ENST00000567269 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
CDH16-206ENST00000567269 KIF21BO75037 1637 aa18.43■□□□□ 0.54
CDH16-206ENST00000567269 CUX2O14529 1486 aa18.42■□□□□ 0.54
CDH16-206ENST00000567269 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
CDH16-206ENST00000567269 HNRNPUL2Q1KMD3 747 aaKnown RBP18.41■□□□□ 0.54
CDH16-206ENST00000567269 NESP48681 1621 aa18.4■□□□□ 0.54
CDH16-206ENST00000567269 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.54
CDH16-206ENST00000567269 PELP1Q8IZL8 1130 aaKnown RBP18.36■□□□□ 0.53
CDH16-206ENST00000567269 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
CDH16-206ENST00000567269 ATP1B4Q9UN42 357 aaPredicted RBP18.33■□□□□ 0.53
CDH16-206ENST00000567269 VPS8Q8N3P4 1428 aa18.33■□□□□ 0.52
CDH16-206ENST00000567269 PRXQ9BXM0 1461 aa18.32■□□□□ 0.52
CDH16-206ENST00000567269 P3H3Q8IVL6 736 aa18.29■□□□□ 0.52
CDH16-206ENST00000567269 IGF1RP08069 1367 aa18.28■□□□□ 0.52
CDH16-206ENST00000567269 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
CDH16-206ENST00000567269 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
CDH16-206ENST00000567269 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
CDH16-206ENST00000567269 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
CDH16-206ENST00000567269 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
CDH16-206ENST00000567269 ITGAEP38570 1179 aa18.18■□□□□ 0.5
CDH16-206ENST00000567269 PDS5BQ9NTI5 1447 aa18.17■□□□□ 0.5
CDH16-206ENST00000567269 TOPBP1Q92547 1522 aa18.17■□□□□ 0.5
CDH16-206ENST00000567269 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
CDH16-206ENST00000567269 POLA1P09884 1462 aaPredicted RBP18.15■□□□□ 0.5
CDH16-206ENST00000567269 ARAP1Q96P48 1450 aa18.15■□□□□ 0.5
CDH16-206ENST00000567269 DNMBPQ6XZF7 1577 aa18.12■□□□□ 0.49
CDH16-206ENST00000567269 LAMC3Q9Y6N6 1575 aa18.09■□□□□ 0.49
CDH16-206ENST00000567269 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.49
CDH16-206ENST00000567269 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
CDH16-206ENST00000567269 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
CDH16-206ENST00000567269 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
CDH16-206ENST00000567269 FHOD3Q2V2M9 1422 aa17.96■□□□□ 0.47
CDH16-206ENST00000567269 GAPVD1Q14C86 1478 aa17.96■□□□□ 0.47
CDH16-206ENST00000567269 KIF21AQ7Z4S6 1674 aa17.91■□□□□ 0.46
CDH16-206ENST00000567269 FHAD1B1AJZ9 1412 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms