RNA–Protein interactions for RNA: ENST00000566336.5

NAE1-215, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-215ENST00000566336 AEBP2Q6ZN18 517 aaPredicted RBP22.5■■□□□ 1.19
NAE1-215ENST00000566336 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
NAE1-215ENST00000566336 SENP3Q9H4L4 574 aaPredicted RBP19.32■□□□□ 0.68
NAE1-215ENST00000566336 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
NAE1-215ENST00000566336 FOXD1Q16676 465 aa17.98■□□□□ 0.47
NAE1-215ENST00000566336 MSH5O43196 834 aa16.97■□□□□ 0.31
NAE1-215ENST00000566336 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.29
NAE1-215ENST00000566336 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
NAE1-215ENST00000566336 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
NAE1-215ENST00000566336 ADRA2BP18089 450 aa16.61■□□□□ 0.25
NAE1-215ENST00000566336 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
NAE1-215ENST00000566336 MAPK8IP2Q13387 824 aaPredicted RBP15.31■□□□□ 0.04
NAE1-215ENST00000566336 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.04
NAE1-215ENST00000566336 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
NAE1-215ENST00000566336 DCAF8L1A6NGE4 600 aa14.81□□□□□ -0.04
NAE1-215ENST00000566336 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
NAE1-215ENST00000566336 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
NAE1-215ENST00000566336 HOXD11P31277 338 aaPredicted RBP14.57□□□□□ -0.08
NAE1-215ENST00000566336 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
NAE1-215ENST00000566336 RNF216Q9NWF9 866 aaPredicted RBP14.44□□□□□ -0.1
NAE1-215ENST00000566336 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
NAE1-215ENST00000566336 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
NAE1-215ENST00000566336 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
NAE1-215ENST00000566336 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
NAE1-215ENST00000566336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
NAE1-215ENST00000566336 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
NAE1-215ENST00000566336 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
NAE1-215ENST00000566336 CAPN15O75808 1086 aa13.57□□□□□ -0.24
NAE1-215ENST00000566336 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
NAE1-215ENST00000566336 KCNA4P22459 653 aa13.45□□□□□ -0.26
NAE1-215ENST00000566336 DSG3P32926 999 aa13.43□□□□□ -0.26
NAE1-215ENST00000566336 APLP2Q06481 763 aa13.31□□□□□ -0.28
NAE1-215ENST00000566336 TRHP20396 242 aaPredicted RBP13.3□□□□□ -0.28
NAE1-215ENST00000566336 SLC4A2P04920 1241 aa13.29□□□□□ -0.28
NAE1-215ENST00000566336 POTEHQ6S545 545 aa13.23□□□□□ -0.29
NAE1-215ENST00000566336 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
NAE1-215ENST00000566336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
NAE1-215ENST00000566336 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
NAE1-215ENST00000566336 ABCB7O75027 752 aa13.21□□□□□ -0.29
NAE1-215ENST00000566336 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
NAE1-215ENST00000566336 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
NAE1-215ENST00000566336 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
NAE1-215ENST00000566336 ABCC9O60706 1549 aa12.84□□□□□ -0.35
NAE1-215ENST00000566336 POLA2Q14181 598 aa12.84□□□□□ -0.35
NAE1-215ENST00000566336 NISCHQ9Y2I1 1504 aa12.83□□□□□ -0.35
NAE1-215ENST00000566336 SLC4A1APQ9BWU0 796 aaKnown RBP12.71□□□□□ -0.37
NAE1-215ENST00000566336 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
NAE1-215ENST00000566336 FOXD4L1Q9NU39 408 aa12.65□□□□□ -0.38
NAE1-215ENST00000566336 ZBTB12Q9Y330 459 aaPredicted RBP12.59□□□□□ -0.39
NAE1-215ENST00000566336 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
NAE1-215ENST00000566336 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
NAE1-215ENST00000566336 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
NAE1-215ENST00000566336 OSCARQ8IYS5 282 aa12.44□□□□□ -0.42
NAE1-215ENST00000566336 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
NAE1-215ENST00000566336 ZBTB22O15209 634 aa12.3□□□□□ -0.44
NAE1-215ENST00000566336 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
NAE1-215ENST00000566336 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
NAE1-215ENST00000566336 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
NAE1-215ENST00000566336 ATXN8OSP0DMR3 200 aa12.25□□□□□ -0.45
NAE1-215ENST00000566336 HAX1O00165 279 aa12.22□□□□□ -0.45
NAE1-215ENST00000566336 FBLN2P98095 1184 aa12.21□□□□□ -0.45
NAE1-215ENST00000566336 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
NAE1-215ENST00000566336 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
NAE1-215ENST00000566336 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
NAE1-215ENST00000566336 SPDYE2Q495Y8 402 aa12.14□□□□□ -0.47
NAE1-215ENST00000566336 CLEC11AQ9Y240 323 aa12.07□□□□□ -0.48
NAE1-215ENST00000566336 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
NAE1-215ENST00000566336 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
NAE1-215ENST00000566336 PRKAR2AP13861 404 aaKnown RBP11.98□□□□□ -0.49
NAE1-215ENST00000566336 MKRN4PQ13434 485 aaPredicted RBP11.95□□□□□ -0.5
NAE1-215ENST00000566336 CCDC180Q9P1Z9 1646 aa11.94□□□□□ -0.5
NAE1-215ENST00000566336 EVX2Q03828 476 aa11.92□□□□□ -0.5
NAE1-215ENST00000566336 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
NAE1-215ENST00000566336 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
NAE1-215ENST00000566336 PRR29P0C7W0 189 aa11.81□□□□□ -0.52
NAE1-215ENST00000566336 PABPN1Q86U42 306 aaKnown RBP eCLIP11.81□□□□□ -0.52
NAE1-215ENST00000566336 CHADLQ6NUI6 762 aa11.79□□□□□ -0.52
NAE1-215ENST00000566336 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
NAE1-215ENST00000566336 GABBR2O75899 941 aa11.7□□□□□ -0.54
NAE1-215ENST00000566336 CECR2Q9BXF3 1484 aa11.68□□□□□ -0.54
NAE1-215ENST00000566336 TRIM41Q8WV44 630 aa11.62□□□□□ -0.55
NAE1-215ENST00000566336 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
NAE1-215ENST00000566336 FARP1Q9Y4F1 1045 aaPredicted RBP11.58□□□□□ -0.56
NAE1-215ENST00000566336 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
NAE1-215ENST00000566336 CC2D2AQ9P2K1 1620 aa11.56□□□□□ -0.56
NAE1-215ENST00000566336 LHX8Q68G74 356 aa11.55□□□□□ -0.56
NAE1-215ENST00000566336 UNC13AQ9UPW8 1703 aa11.53□□□□□ -0.56
NAE1-215ENST00000566336 NACADO15069 1562 aa11.51□□□□□ -0.57
NAE1-215ENST00000566336 CUX2O14529 1486 aa11.47□□□□□ -0.57
NAE1-215ENST00000566336 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.57
NAE1-215ENST00000566336 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
NAE1-215ENST00000566336 CLCN6P51797 869 aa11.44□□□□□ -0.58
NAE1-215ENST00000566336 EHMT2Q96KQ7 1210 aa11.43□□□□□ -0.58
NAE1-215ENST00000566336 DCBLD2Q96PD2 775 aa11.43□□□□□ -0.58
NAE1-215ENST00000566336 ZRANB1Q9UGI0 708 aa11.42□□□□□ -0.58
NAE1-215ENST00000566336 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
NAE1-215ENST00000566336 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
NAE1-215ENST00000566336 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
NAE1-215ENST00000566336 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
NAE1-215ENST00000566336 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms