RNA–Protein interactions for RNA: ENST00000566231.5

CMC2-216, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 652 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-216ENST00000566231 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
CMC2-216ENST00000566231 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
CMC2-216ENST00000566231 SENP3Q9H4L4 574 aaPredicted RBP19.35■□□□□ 0.69
CMC2-216ENST00000566231 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
CMC2-216ENST00000566231 FOXD1Q16676 465 aa18.06■□□□□ 0.48
CMC2-216ENST00000566231 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
CMC2-216ENST00000566231 MSH5O43196 834 aa17.02■□□□□ 0.32
CMC2-216ENST00000566231 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
CMC2-216ENST00000566231 PLPPR3Q6T4P5 718 aa16.81■□□□□ 0.28
CMC2-216ENST00000566231 PPP6R1Q9UPN7 881 aa16.66■□□□□ 0.26
CMC2-216ENST00000566231 ADRA2BP18089 450 aa16.6■□□□□ 0.25
CMC2-216ENST00000566231 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.04
CMC2-216ENST00000566231 DMRT2Q9Y5R5 561 aa15.29■□□□□ 0.04
CMC2-216ENST00000566231 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
CMC2-216ENST00000566231 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
CMC2-216ENST00000566231 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
CMC2-216ENST00000566231 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
CMC2-216ENST00000566231 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
CMC2-216ENST00000566231 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
CMC2-216ENST00000566231 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
CMC2-216ENST00000566231 RNF216Q9NWF9 866 aaPredicted RBP14.43□□□□□ -0.1
CMC2-216ENST00000566231 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
CMC2-216ENST00000566231 NCBP3Q53F19 620 aaKnown RBP14.19□□□□□ -0.14
CMC2-216ENST00000566231 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
CMC2-216ENST00000566231 NPM3O75607 178 aaKnown RBP14.03□□□□□ -0.16
CMC2-216ENST00000566231 KCNA4P22459 653 aa14.01□□□□□ -0.17
CMC2-216ENST00000566231 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
CMC2-216ENST00000566231 U3KPZ7 1027 aaPredicted RBP13.61□□□□□ -0.23
CMC2-216ENST00000566231 CAPN15O75808 1086 aa13.5□□□□□ -0.25
CMC2-216ENST00000566231 SPINK5Q9NQ38 1064 aaPredicted RBP13.5□□□□□ -0.25
CMC2-216ENST00000566231 DSG3P32926 999 aa13.47□□□□□ -0.25
CMC2-216ENST00000566231 POTEHQ6S545 545 aa13.34□□□□□ -0.27
CMC2-216ENST00000566231 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
CMC2-216ENST00000566231 SLC4A1APQ9BWU0 796 aaKnown RBP13.27□□□□□ -0.29
CMC2-216ENST00000566231 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.29
CMC2-216ENST00000566231 APLP2Q06481 763 aa13.21□□□□□ -0.29
CMC2-216ENST00000566231 ZNF219Q9P2Y4 722 aaPredicted RBP13.17□□□□□ -0.3
CMC2-216ENST00000566231 ABCB7O75027 752 aa13.15□□□□□ -0.3
CMC2-216ENST00000566231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
CMC2-216ENST00000566231 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
CMC2-216ENST00000566231 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
CMC2-216ENST00000566231 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
CMC2-216ENST00000566231 MYCNP04198 464 aaPredicted RBP12.96□□□□□ -0.33
CMC2-216ENST00000566231 ZBTB22O15209 634 aa12.91□□□□□ -0.34
CMC2-216ENST00000566231 RBM42Q9BTD8 480 aaKnown RBP12.88□□□□□ -0.35
CMC2-216ENST00000566231 POLA2Q14181 598 aa12.78□□□□□ -0.36
CMC2-216ENST00000566231 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
CMC2-216ENST00000566231 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
CMC2-216ENST00000566231 ATXN8OSP0DMR3 200 aa12.54□□□□□ -0.4
CMC2-216ENST00000566231 CSRNP3Q8WYN3 585 aa12.54□□□□□ -0.4
CMC2-216ENST00000566231 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
CMC2-216ENST00000566231 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
CMC2-216ENST00000566231 ZBTB12Q9Y330 459 aaPredicted RBP12.51□□□□□ -0.41
CMC2-216ENST00000566231 REM2Q8IYK8 340 aaPredicted RBP12.4□□□□□ -0.42
CMC2-216ENST00000566231 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
CMC2-216ENST00000566231 SP7Q8TDD2 431 aaPredicted RBP12.38□□□□□ -0.43
CMC2-216ENST00000566231 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
CMC2-216ENST00000566231 PITPNM1O00562 1244 aa12.27□□□□□ -0.45
CMC2-216ENST00000566231 HAX1O00165 279 aa12.21□□□□□ -0.45
CMC2-216ENST00000566231 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.45
CMC2-216ENST00000566231 FBLN2P98095 1184 aa12.1□□□□□ -0.47
CMC2-216ENST00000566231 SPDYE2BA6NHP3 402 aa12.09□□□□□ -0.47
CMC2-216ENST00000566231 SPDYE6P0CI01 402 aa12.09□□□□□ -0.47
CMC2-216ENST00000566231 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
CMC2-216ENST00000566231 SPDYE2Q495Y8 402 aa12.09□□□□□ -0.47
CMC2-216ENST00000566231 EVX2Q03828 476 aa12.02□□□□□ -0.49
CMC2-216ENST00000566231 SPDYE1Q8NFV5 336 aaPredicted RBP11.96□□□□□ -0.49
CMC2-216ENST00000566231 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
CMC2-216ENST00000566231 PRKAR2AP13861 404 aaKnown RBP11.95□□□□□ -0.5
CMC2-216ENST00000566231 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
CMC2-216ENST00000566231 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
CMC2-216ENST00000566231 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
CMC2-216ENST00000566231 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
CMC2-216ENST00000566231 GABBR2O75899 941 aa11.73□□□□□ -0.53
CMC2-216ENST00000566231 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
CMC2-216ENST00000566231 PRR29P0C7W0 189 aa11.71□□□□□ -0.53
CMC2-216ENST00000566231 SPDYE4A6NLX3 237 aa11.63□□□□□ -0.55
CMC2-216ENST00000566231 LHX8Q68G74 356 aa11.61□□□□□ -0.55
CMC2-216ENST00000566231 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
CMC2-216ENST00000566231 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
CMC2-216ENST00000566231 POTEIP0CG38 1075 aa11.48□□□□□ -0.57
CMC2-216ENST00000566231 CLCN6P51797 869 aa11.45□□□□□ -0.58
CMC2-216ENST00000566231 PROM2Q8N271 834 aa11.43□□□□□ -0.58
CMC2-216ENST00000566231 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
CMC2-216ENST00000566231 DCBLD2Q96PD2 775 aa11.37□□□□□ -0.59
CMC2-216ENST00000566231 ZNF579Q8NAF0 562 aaKnown RBP11.36□□□□□ -0.59
CMC2-216ENST00000566231 ZRANB1Q9UGI0 708 aa11.35□□□□□ -0.59
CMC2-216ENST00000566231 FKBP8Q14318 412 aa11.34□□□□□ -0.59
CMC2-216ENST00000566231 CREBZFQ9NS37 354 aa11.34□□□□□ -0.59
CMC2-216ENST00000566231 GALR2O43603 387 aaPredicted RBP11.24□□□□□ -0.61
CMC2-216ENST00000566231 PAK3O75914 559 aaPredicted RBP11.2□□□□□ -0.62
CMC2-216ENST00000566231 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
CMC2-216ENST00000566231 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
CMC2-216ENST00000566231 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
CMC2-216ENST00000566231 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
CMC2-216ENST00000566231 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
CMC2-216ENST00000566231 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
CMC2-216ENST00000566231 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
CMC2-216ENST00000566231 MIER1Q8N108 512 aa11.05□□□□□ -0.64
CMC2-216ENST00000566231 FBXO3Q9UK99 471 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms