RNA–Protein interactions for RNA: ENST00000566101.1

LINC01477-201, Transcript of long intergenic non-protein coding RNA 1477, humanhuman

TSL 1 (best) BASIC

Gene LINC01477, Length 1,226 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01477-201ENST00000566101 AEBP2Q6ZN18 517 aaPredicted RBP34.56■■■■□ 3.12
LINC01477-201ENST00000566101 CHIC1Q5VXU3 224 aa33.7■■■□□ 2.99
LINC01477-201ENST00000566101 PHF23Q9BUL5 403 aaPredicted RBP29.79■■■□□ 2.36
LINC01477-201ENST00000566101 SENP3Q9H4L4 574 aaPredicted RBP29.09■■■□□ 2.25
LINC01477-201ENST00000566101 PLPPR3Q6T4P5 718 aa27.34■■□□□ 1.97
LINC01477-201ENST00000566101 FOXD1Q16676 465 aa27.14■■□□□ 1.94
LINC01477-201ENST00000566101 PPP6R1Q9UPN7 881 aa26.28■■□□□ 1.8
LINC01477-201ENST00000566101 ADRA2BP18089 450 aa26.24■■□□□ 1.79
LINC01477-201ENST00000566101 PIAS4Q8N2W9 510 aaPredicted RBP25.55■■□□□ 1.68
LINC01477-201ENST00000566101 MSH5O43196 834 aa24.79■■□□□ 1.56
LINC01477-201ENST00000566101 PPP4R3CPQ6ZMV5 832 aa24.18■■□□□ 1.46
LINC01477-201ENST00000566101 KCNA4P22459 653 aa23.83■■□□□ 1.41
LINC01477-201ENST00000566101 MAPK8IP2Q13387 824 aaPredicted RBP23.82■■□□□ 1.4
LINC01477-201ENST00000566101 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
LINC01477-201ENST00000566101 NCBP3Q53F19 620 aaKnown RBP23.43■■□□□ 1.34
LINC01477-201ENST00000566101 CNKSR2Q8WXI2 1034 aa23.4■■□□□ 1.34
LINC01477-201ENST00000566101 DMRT2Q9Y5R5 561 aa23.29■■□□□ 1.32
LINC01477-201ENST00000566101 NPM3O75607 178 aaKnown RBP23.27■■□□□ 1.32
LINC01477-201ENST00000566101 RNF216Q9NWF9 866 aaPredicted RBP22.93■■□□□ 1.26
LINC01477-201ENST00000566101 HOXD11P31277 338 aaPredicted RBP22.84■■□□□ 1.25
LINC01477-201ENST00000566101 SLC4A1APQ9BWU0 796 aaKnown RBP22.61■■□□□ 1.21
LINC01477-201ENST00000566101 POTEDQ86YR6 584 aa22.56■■□□□ 1.2
LINC01477-201ENST00000566101 DNAJC5BQ9UF47 199 aa22.43■■□□□ 1.18
LINC01477-201ENST00000566101 DCAF8L1A6NGE4 600 aa22.3■■□□□ 1.16
LINC01477-201ENST00000566101 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
LINC01477-201ENST00000566101 ZBTB22O15209 634 aa22■■□□□ 1.11
LINC01477-201ENST00000566101 SLC4A2P04920 1241 aa22■■□□□ 1.11
LINC01477-201ENST00000566101 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
LINC01477-201ENST00000566101 FOXD4L1Q9NU39 408 aa21.76■■□□□ 1.07
LINC01477-201ENST00000566101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.75■■□□□ 1.07
LINC01477-201ENST00000566101 U3KPZ7 1027 aaPredicted RBP21.5■■□□□ 1.03
LINC01477-201ENST00000566101 MYCNP04198 464 aaPredicted RBP21.38■■□□□ 1.01
LINC01477-201ENST00000566101 RNF39Q9H2S5 420 aa21.37■■□□□ 1.01
LINC01477-201ENST00000566101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.03■□□□□ 0.96
LINC01477-201ENST00000566101 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
LINC01477-201ENST00000566101 ATF5Q9Y2D1 282 aaPredicted RBP21.03■□□□□ 0.96
LINC01477-201ENST00000566101 C1QBPQ07021 282 aaKnown RBP21.02■□□□□ 0.96
LINC01477-201ENST00000566101 SAMD1Q6SPF0 538 aaPredicted RBP21.02■□□□□ 0.96
LINC01477-201ENST00000566101 ATXN8OSP0DMR3 200 aa20.92■□□□□ 0.94
LINC01477-201ENST00000566101 SPINK5Q9NQ38 1064 aaPredicted RBP20.92■□□□□ 0.94
LINC01477-201ENST00000566101 CAPN15O75808 1086 aa20.72■□□□□ 0.91
LINC01477-201ENST00000566101 APLP2Q06481 763 aa20.72■□□□□ 0.91
LINC01477-201ENST00000566101 CACNB1Q02641 598 aaPredicted RBP20.71■□□□□ 0.91
LINC01477-201ENST00000566101 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
LINC01477-201ENST00000566101 ZNF219Q9P2Y4 722 aaPredicted RBP20.56■□□□□ 0.88
LINC01477-201ENST00000566101 ABCB7O75027 752 aa20.42■□□□□ 0.86
LINC01477-201ENST00000566101 DSG3P32926 999 aa20.39■□□□□ 0.85
LINC01477-201ENST00000566101 POLA2Q14181 598 aa20.37■□□□□ 0.85
LINC01477-201ENST00000566101 MKRN4PQ13434 485 aaPredicted RBP20.08■□□□□ 0.81
LINC01477-201ENST00000566101 FBLN2P98095 1184 aa19.88■□□□□ 0.77
LINC01477-201ENST00000566101 ZBTB12Q9Y330 459 aaPredicted RBP19.85■□□□□ 0.77
LINC01477-201ENST00000566101 FKBP8Q14318 412 aa19.72■□□□□ 0.75
LINC01477-201ENST00000566101 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
LINC01477-201ENST00000566101 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
LINC01477-201ENST00000566101 SPDYE2BA6NHP3 402 aa19.41■□□□□ 0.7
LINC01477-201ENST00000566101 SPDYE6P0CI01 402 aa19.41■□□□□ 0.7
LINC01477-201ENST00000566101 SPDYE2Q495Y8 402 aa19.41■□□□□ 0.7
LINC01477-201ENST00000566101 ZNF692Q9BU19 519 aaPredicted RBP19.4■□□□□ 0.7
LINC01477-201ENST00000566101 SSUH2Q9Y2M2 353 aa19.34■□□□□ 0.69
LINC01477-201ENST00000566101 PROM2Q8N271 834 aa19.27■□□□□ 0.68
LINC01477-201ENST00000566101 RBM42Q9BTD8 480 aaKnown RBP19.25■□□□□ 0.67
LINC01477-201ENST00000566101 PABPN1Q86U42 306 aaKnown RBP eCLIP19.19■□□□□ 0.66
LINC01477-201ENST00000566101 AKT1S1Q96B36 256 aa19.11■□□□□ 0.65
LINC01477-201ENST00000566101 REM2Q8IYK8 340 aaPredicted RBP19.02■□□□□ 0.64
LINC01477-201ENST00000566101 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
LINC01477-201ENST00000566101 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
LINC01477-201ENST00000566101 SPDYE1Q8NFV5 336 aaPredicted RBP18.81■□□□□ 0.6
LINC01477-201ENST00000566101 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
LINC01477-201ENST00000566101 STAG3Q9UJ98 1225 aa18.73■□□□□ 0.59
LINC01477-201ENST00000566101 VASPP50552 380 aaPredicted RBP18.7■□□□□ 0.58
LINC01477-201ENST00000566101 PRR29P0C7W0 189 aa18.59■□□□□ 0.57
LINC01477-201ENST00000566101 CHRDL2Q6WN34 429 aa18.54■□□□□ 0.56
LINC01477-201ENST00000566101 IFNLR1Q8IU57 520 aaPredicted RBP18.53■□□□□ 0.56
LINC01477-201ENST00000566101 MIER1Q8N108 512 aa18.53■□□□□ 0.56
LINC01477-201ENST00000566101 PLCD3Q8N3E9 789 aa18.48■□□□□ 0.55
LINC01477-201ENST00000566101 CREBZFQ9NS37 354 aa18.48■□□□□ 0.55
LINC01477-201ENST00000566101 CHADLQ6NUI6 762 aa18.42■□□□□ 0.54
LINC01477-201ENST00000566101 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
LINC01477-201ENST00000566101 PIP4P2Q8N4L2 257 aa18.37■□□□□ 0.53
LINC01477-201ENST00000566101 MNX1P50219 401 aaPredicted RBP18.33■□□□□ 0.52
LINC01477-201ENST00000566101 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
LINC01477-201ENST00000566101 PRKAR2AP13861 404 aaKnown RBP18.31■□□□□ 0.52
LINC01477-201ENST00000566101 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
LINC01477-201ENST00000566101 RTN4Q9NQC3 1192 aaKnown RBP18.18■□□□□ 0.5
LINC01477-201ENST00000566101 SPOCK2Q92563 424 aa18.17■□□□□ 0.5
LINC01477-201ENST00000566101 FARP1Q9Y4F1 1045 aaPredicted RBP18.17■□□□□ 0.5
LINC01477-201ENST00000566101 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
LINC01477-201ENST00000566101 NUBP1P53384 320 aa18.1■□□□□ 0.49
LINC01477-201ENST00000566101 RASEFQ8IZ41 740 aa18.04■□□□□ 0.48
LINC01477-201ENST00000566101 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
LINC01477-201ENST00000566101 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
LINC01477-201ENST00000566101 PKD2Q13563 968 aa17.96■□□□□ 0.47
LINC01477-201ENST00000566101 CIZ1Q9ULV3 898 aaPredicted RBP17.91■□□□□ 0.46
LINC01477-201ENST00000566101 DCAF8Q5TAQ9 597 aa17.88■□□□□ 0.45
LINC01477-201ENST00000566101 TSPYL2Q9H2G4 693 aaPredicted RBP17.87■□□□□ 0.45
LINC01477-201ENST00000566101 POTEHQ6S545 545 aa17.84■□□□□ 0.45
LINC01477-201ENST00000566101 FAM212AQ96EL1 285 aa17.83■□□□□ 0.44
LINC01477-201ENST00000566101 CD44P16070 742 aaKnown RBP17.78■□□□□ 0.44
LINC01477-201ENST00000566101 GSE1Q14687 1217 aa17.78■□□□□ 0.44
LINC01477-201ENST00000566101 C19orf67A6NJJ6 358 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms