RNA–Protein interactions for RNA: ENST00000565940.6

ITFG1-209, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 1 (best)

Gene ITFG1, Length 2,663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-209ENST00000565940 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
ITFG1-209ENST00000565940 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
ITFG1-209ENST00000565940 PHF23Q9BUL5 403 aaPredicted RBP17.95■□□□□ 0.46
ITFG1-209ENST00000565940 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
ITFG1-209ENST00000565940 PLPPR3Q6T4P5 718 aa16.93■□□□□ 0.3
ITFG1-209ENST00000565940 FOXD1Q16676 465 aa16.09■□□□□ 0.17
ITFG1-209ENST00000565940 ADRA2BP18089 450 aa15.72■□□□□ 0.11
ITFG1-209ENST00000565940 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
ITFG1-209ENST00000565940 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
ITFG1-209ENST00000565940 MSH5O43196 834 aa14.92□□□□□ -0.02
ITFG1-209ENST00000565940 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
ITFG1-209ENST00000565940 KCNA4P22459 653 aa14.84□□□□□ -0.03
ITFG1-209ENST00000565940 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
ITFG1-209ENST00000565940 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
ITFG1-209ENST00000565940 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
ITFG1-209ENST00000565940 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
ITFG1-209ENST00000565940 SLC4A1APQ9BWU0 796 aaKnown RBP14.32□□□□□ -0.12
ITFG1-209ENST00000565940 EHMT2Q96KQ7 1210 aa14.18□□□□□ -0.14
ITFG1-209ENST00000565940 MAPK8IP2Q13387 824 aaPredicted RBP14.1□□□□□ -0.15
ITFG1-209ENST00000565940 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
ITFG1-209ENST00000565940 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
ITFG1-209ENST00000565940 DMRT2Q9Y5R5 561 aa14.05□□□□□ -0.16
ITFG1-209ENST00000565940 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
ITFG1-209ENST00000565940 CSRNP3Q8WYN3 585 aa13.89□□□□□ -0.19
ITFG1-209ENST00000565940 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.22
ITFG1-209ENST00000565940 ZBTB22O15209 634 aa13.58□□□□□ -0.24
ITFG1-209ENST00000565940 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
ITFG1-209ENST00000565940 MYCNP04198 464 aaPredicted RBP13.37□□□□□ -0.27
ITFG1-209ENST00000565940 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
ITFG1-209ENST00000565940 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
ITFG1-209ENST00000565940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.26□□□□□ -0.29
ITFG1-209ENST00000565940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
ITFG1-209ENST00000565940 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
ITFG1-209ENST00000565940 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
ITFG1-209ENST00000565940 POTEDQ86YR6 584 aa13.13□□□□□ -0.31
ITFG1-209ENST00000565940 APLP2Q06481 763 aa13.08□□□□□ -0.31
ITFG1-209ENST00000565940 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
ITFG1-209ENST00000565940 ATF5Q9Y2D1 282 aaPredicted RBP12.73□□□□□ -0.37
ITFG1-209ENST00000565940 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
ITFG1-209ENST00000565940 ZNF219Q9P2Y4 722 aaPredicted RBP12.69□□□□□ -0.38
ITFG1-209ENST00000565940 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
ITFG1-209ENST00000565940 FKBP8Q14318 412 aa12.57□□□□□ -0.4
ITFG1-209ENST00000565940 CAPN15O75808 1086 aa12.5□□□□□ -0.41
ITFG1-209ENST00000565940 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
ITFG1-209ENST00000565940 FBLN2P98095 1184 aa12.48□□□□□ -0.41
ITFG1-209ENST00000565940 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
ITFG1-209ENST00000565940 SPINK5Q9NQ38 1064 aaPredicted RBP12.44□□□□□ -0.42
ITFG1-209ENST00000565940 POLA2Q14181 598 aa12.38□□□□□ -0.43
ITFG1-209ENST00000565940 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
ITFG1-209ENST00000565940 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
ITFG1-209ENST00000565940 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
ITFG1-209ENST00000565940 MKRN4PQ13434 485 aaPredicted RBP12.25□□□□□ -0.45
ITFG1-209ENST00000565940 ABCB7O75027 752 aa12.19□□□□□ -0.46
ITFG1-209ENST00000565940 DSG3P32926 999 aa12.17□□□□□ -0.46
ITFG1-209ENST00000565940 PROM2Q8N271 834 aa12.14□□□□□ -0.47
ITFG1-209ENST00000565940 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
ITFG1-209ENST00000565940 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
ITFG1-209ENST00000565940 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
ITFG1-209ENST00000565940 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
ITFG1-209ENST00000565940 RTN4Q9NQC3 1192 aaKnown RBP11.99□□□□□ -0.49
ITFG1-209ENST00000565940 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
ITFG1-209ENST00000565940 STAG3Q9UJ98 1225 aa11.92□□□□□ -0.5
ITFG1-209ENST00000565940 VASPP50552 380 aaPredicted RBP11.91□□□□□ -0.5
ITFG1-209ENST00000565940 SSUH2Q9Y2M2 353 aa11.91□□□□□ -0.5
ITFG1-209ENST00000565940 OSCARQ8IYS5 282 aa11.9□□□□□ -0.5
ITFG1-209ENST00000565940 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
ITFG1-209ENST00000565940 PABPN1Q86U42 306 aaKnown RBP eCLIP11.78□□□□□ -0.52
ITFG1-209ENST00000565940 PLEKHG5O94827 1062 aa11.73□□□□□ -0.53
ITFG1-209ENST00000565940 IFNLR1Q8IU57 520 aaPredicted RBP11.69□□□□□ -0.54
ITFG1-209ENST00000565940 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
ITFG1-209ENST00000565940 PLCD3Q8N3E9 789 aa11.67□□□□□ -0.54
ITFG1-209ENST00000565940 KLHL34Q8N239 644 aa11.66□□□□□ -0.54
ITFG1-209ENST00000565940 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
ITFG1-209ENST00000565940 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
ITFG1-209ENST00000565940 MIER1Q8N108 512 aa11.63□□□□□ -0.55
ITFG1-209ENST00000565940 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
ITFG1-209ENST00000565940 SLC24A1O60721 1099 aa11.56□□□□□ -0.56
ITFG1-209ENST00000565940 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
ITFG1-209ENST00000565940 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
ITFG1-209ENST00000565940 PKD2Q13563 968 aa11.44□□□□□ -0.58
ITFG1-209ENST00000565940 PRR29P0C7W0 189 aa11.43□□□□□ -0.58
ITFG1-209ENST00000565940 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
ITFG1-209ENST00000565940 CLEC11AQ9Y240 323 aa11.4□□□□□ -0.59
ITFG1-209ENST00000565940 GSE1Q14687 1217 aa11.38□□□□□ -0.59
ITFG1-209ENST00000565940 DCAF8L2P0C7V8 631 aa11.37□□□□□ -0.59
ITFG1-209ENST00000565940 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
ITFG1-209ENST00000565940 NPM1P06748 294 aaKnown RBP eCLIP11.31□□□□□ -0.6
ITFG1-209ENST00000565940 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
ITFG1-209ENST00000565940 TAOK2Q9UL54 1235 aa11.29□□□□□ -0.6
ITFG1-209ENST00000565940 PITPNM1O00562 1244 aa11.27□□□□□ -0.61
ITFG1-209ENST00000565940 FAM212AQ96EL1 285 aa11.25□□□□□ -0.61
ITFG1-209ENST00000565940 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
ITFG1-209ENST00000565940 PLCB2Q00722 1185 aa11.24□□□□□ -0.61
ITFG1-209ENST00000565940 NUBP1P53384 320 aa11.24□□□□□ -0.61
ITFG1-209ENST00000565940 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
ITFG1-209ENST00000565940 DCAF8Q5TAQ9 597 aa11.22□□□□□ -0.61
ITFG1-209ENST00000565940 MNX1P50219 401 aaPredicted RBP11.18□□□□□ -0.62
ITFG1-209ENST00000565940 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
ITFG1-209ENST00000565940 RGL2O15211 777 aa11.17□□□□□ -0.62
ITFG1-209ENST00000565940 RIOK3O14730 519 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms