RNA–Protein interactions for RNA: ENST00000565910.5

ETFA-220, Transcript of electron transfer flavoprotein subunit alpha, humanhuman

TSL 3

Gene ETFA, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFA-220ENST00000565910 AEBP2Q6ZN18 517 aaPredicted RBP22.55■■□□□ 1.2
ETFA-220ENST00000565910 CHIC1Q5VXU3 224 aa21.97■■□□□ 1.11
ETFA-220ENST00000565910 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
ETFA-220ENST00000565910 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
ETFA-220ENST00000565910 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
ETFA-220ENST00000565910 FOXD1Q16676 465 aa17.69■□□□□ 0.42
ETFA-220ENST00000565910 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
ETFA-220ENST00000565910 ADRA2BP18089 450 aa17.14■□□□□ 0.33
ETFA-220ENST00000565910 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
ETFA-220ENST00000565910 MSH5O43196 834 aa16.55■□□□□ 0.24
ETFA-220ENST00000565910 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
ETFA-220ENST00000565910 PPP4R3CPQ6ZMV5 832 aa15.79■□□□□ 0.12
ETFA-220ENST00000565910 KCNA4P22459 653 aa15.59■□□□□ 0.09
ETFA-220ENST00000565910 MAPK8IP2Q13387 824 aaPredicted RBP15.57■□□□□ 0.08
ETFA-220ENST00000565910 SCAF1Q9H7N4 1312 aaKnown RBP15.42■□□□□ 0.06
ETFA-220ENST00000565910 NCBP3Q53F19 620 aaKnown RBP15.25■□□□□ 0.03
ETFA-220ENST00000565910 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
ETFA-220ENST00000565910 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
ETFA-220ENST00000565910 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
ETFA-220ENST00000565910 RNF216Q9NWF9 866 aaPredicted RBP14.92□□□□□ -0.02
ETFA-220ENST00000565910 HOXD11P31277 338 aaPredicted RBP14.87□□□□□ -0.03
ETFA-220ENST00000565910 SLC4A1APQ9BWU0 796 aaKnown RBP14.78□□□□□ -0.04
ETFA-220ENST00000565910 DNAJC5BQ9UF47 199 aa14.57□□□□□ -0.08
ETFA-220ENST00000565910 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
ETFA-220ENST00000565910 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
ETFA-220ENST00000565910 ZBTB22O15209 634 aa14.41□□□□□ -0.1
ETFA-220ENST00000565910 SLC4A2P04920 1241 aa14.38□□□□□ -0.11
ETFA-220ENST00000565910 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
ETFA-220ENST00000565910 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
ETFA-220ENST00000565910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.147e-6■□□□□ 10.8
ETFA-220ENST00000565910 CACNB1Q02641 598 aaPredicted RBP14.16□□□□□ -0.14
ETFA-220ENST00000565910 RNF39Q9H2S5 420 aa14.08□□□□□ -0.16
ETFA-220ENST00000565910 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
ETFA-220ENST00000565910 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
ETFA-220ENST00000565910 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
ETFA-220ENST00000565910 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.21
ETFA-220ENST00000565910 SPINK5Q9NQ38 1064 aaPredicted RBP13.67□□□□□ -0.22
ETFA-220ENST00000565910 SAMD1Q6SPF0 538 aaPredicted RBP13.66□□□□□ -0.22
ETFA-220ENST00000565910 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.65□□□□□ -0.22
ETFA-220ENST00000565910 HNRNPUL2Q1KMD3 747 aaKnown RBP13.65□□□□□ -0.22
ETFA-220ENST00000565910 ATXN8OSP0DMR3 200 aa13.62□□□□□ -0.23
ETFA-220ENST00000565910 CAPN15O75808 1086 aa13.51□□□□□ -0.25
ETFA-220ENST00000565910 TRHP20396 242 aaPredicted RBP13.5□□□□□ -0.25
ETFA-220ENST00000565910 APLP2Q06481 763 aa13.44□□□□□ -0.26
ETFA-220ENST00000565910 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
ETFA-220ENST00000565910 ABCB7O75027 752 aa13.34□□□□□ -0.27
ETFA-220ENST00000565910 POLA2Q14181 598 aa13.29□□□□□ -0.28
ETFA-220ENST00000565910 DSG3P32926 999 aa13.28□□□□□ -0.28
ETFA-220ENST00000565910 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
ETFA-220ENST00000565910 FBLN2P98095 1184 aa12.94□□□□□ -0.34
ETFA-220ENST00000565910 FKBP8Q14318 412 aa12.92□□□□□ -0.34
ETFA-220ENST00000565910 ZBTB12Q9Y330 459 aaPredicted RBP12.87□□□□□ -0.35
ETFA-220ENST00000565910 OSCARQ8IYS5 282 aa12.85□□□□□ -0.35
ETFA-220ENST00000565910 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
ETFA-220ENST00000565910 POTEHQ6S545 545 aa12.7□□□□□ -0.38
ETFA-220ENST00000565910 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
ETFA-220ENST00000565910 SPDYE2BA6NHP3 402 aa12.62□□□□□ -0.39
ETFA-220ENST00000565910 SPDYE6P0CI01 402 aa12.62□□□□□ -0.39
ETFA-220ENST00000565910 SPDYE2Q495Y8 402 aa12.62□□□□□ -0.39
ETFA-220ENST00000565910 RBM42Q9BTD8 480 aaKnown RBP12.61□□□□□ -0.39
ETFA-220ENST00000565910 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
ETFA-220ENST00000565910 PROM2Q8N271 834 aa12.57□□□□□ -0.4
ETFA-220ENST00000565910 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
ETFA-220ENST00000565910 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
ETFA-220ENST00000565910 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
ETFA-220ENST00000565910 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
ETFA-220ENST00000565910 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
ETFA-220ENST00000565910 PITPNM1O00562 1244 aa12.26□□□□□ -0.45
ETFA-220ENST00000565910 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
ETFA-220ENST00000565910 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
ETFA-220ENST00000565910 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
ETFA-220ENST00000565910 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
ETFA-220ENST00000565910 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
ETFA-220ENST00000565910 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
ETFA-220ENST00000565910 MIER1Q8N108 512 aa12.1□□□□□ -0.47
ETFA-220ENST00000565910 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
ETFA-220ENST00000565910 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
ETFA-220ENST00000565910 CHADLQ6NUI6 762 aa12.05□□□□□ -0.48
ETFA-220ENST00000565910 FXR2P51116 673 aaKnown RBP eCLIP11.98□□□□□ -0.49
ETFA-220ENST00000565910 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
ETFA-220ENST00000565910 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
ETFA-220ENST00000565910 MNX1P50219 401 aaPredicted RBP11.96□□□□□ -0.49
ETFA-220ENST00000565910 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
ETFA-220ENST00000565910 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
ETFA-220ENST00000565910 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
ETFA-220ENST00000565910 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
ETFA-220ENST00000565910 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
ETFA-220ENST00000565910 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
ETFA-220ENST00000565910 NUBP1P53384 320 aa11.83□□□□□ -0.52
ETFA-220ENST00000565910 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
ETFA-220ENST00000565910 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
ETFA-220ENST00000565910 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
ETFA-220ENST00000565910 PKD2Q13563 968 aa11.77□□□□□ -0.53
ETFA-220ENST00000565910 HAX1O00165 279 aa11.73□□□□□ -0.53
ETFA-220ENST00000565910 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
ETFA-220ENST00000565910 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
ETFA-220ENST00000565910 DCAF8Q5TAQ9 597 aa11.69□□□□□ -0.54
ETFA-220ENST00000565910 TSPYL2Q9H2G4 693 aaPredicted RBP11.68□□□□□ -0.54
ETFA-220ENST00000565910 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
ETFA-220ENST00000565910 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms