RNA–Protein interactions for RNA: ENST00000565376.2

CCP110-207, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-207ENST00000565376 AEBP2Q6ZN18 517 aaPredicted RBP34.46■■■■□ 3.11
CCP110-207ENST00000565376 CHIC1Q5VXU3 224 aa33.46■■■□□ 2.95
CCP110-207ENST00000565376 SENP3Q9H4L4 574 aaPredicted RBP29.38■■■□□ 2.29
CCP110-207ENST00000565376 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
CCP110-207ENST00000565376 FOXD1Q16676 465 aa27.24■■□□□ 1.95
CCP110-207ENST00000565376 PLPPR3Q6T4P5 718 aa27.09■■□□□ 1.93
CCP110-207ENST00000565376 PPP6R1Q9UPN7 881 aa25.97■■□□□ 1.75
CCP110-207ENST00000565376 ADRA2BP18089 450 aa25.94■■□□□ 1.74
CCP110-207ENST00000565376 PIAS4Q8N2W9 510 aaPredicted RBP25.65■■□□□ 1.7
CCP110-207ENST00000565376 MSH5O43196 834 aa25.29■■□□□ 1.64
CCP110-207ENST00000565376 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
CCP110-207ENST00000565376 PPP4R3CPQ6ZMV5 832 aa23.8■■□□□ 1.4
CCP110-207ENST00000565376 MAPK8IP2Q13387 824 aaPredicted RBP23.6■■□□□ 1.37
CCP110-207ENST00000565376 POTEDQ86YR6 584 aa23.43■■□□□ 1.34
CCP110-207ENST00000565376 DMRT2Q9Y5R5 561 aa23.38■■□□□ 1.33
CCP110-207ENST00000565376 CNKSR2Q8WXI2 1034 aa23.22■■□□□ 1.31
CCP110-207ENST00000565376 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
CCP110-207ENST00000565376 KCNA4P22459 653 aa22.92■■□□□ 1.26
CCP110-207ENST00000565376 RNF216Q9NWF9 866 aaPredicted RBP22.83■■□□□ 1.25
CCP110-207ENST00000565376 HOXD11P31277 338 aaPredicted RBP22.8■■□□□ 1.24
CCP110-207ENST00000565376 NPM3O75607 178 aaKnown RBP22.75■■□□□ 1.23
CCP110-207ENST00000565376 DCAF8L1A6NGE4 600 aa22.38■■□□□ 1.17
CCP110-207ENST00000565376 DNAJC5BQ9UF47 199 aa22.19■■□□□ 1.14
CCP110-207ENST00000565376 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
CCP110-207ENST00000565376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.73■■□□□ 1.07
CCP110-207ENST00000565376 RNF39Q9H2S5 420 aa21.61■■□□□ 1.05
CCP110-207ENST00000565376 SLC4A2P04920 1241 aa21.53■■□□□ 1.04
CCP110-207ENST00000565376 C1QBPQ07021 282 aaKnown RBP21.37■■□□□ 1.01
CCP110-207ENST00000565376 U3KPZ7 1027 aaPredicted RBP21.33■■□□□ 1.01
CCP110-207ENST00000565376 NISCHQ9Y2I1 1504 aa21.27■■□□□ 1
CCP110-207ENST00000565376 CACNB1Q02641 598 aaPredicted RBP21.25■□□□□ 0.99
CCP110-207ENST00000565376 FOXD4L1Q9NU39 408 aa21.22■□□□□ 0.99
CCP110-207ENST00000565376 MYCNP04198 464 aaPredicted RBP21.08■□□□□ 0.97
CCP110-207ENST00000565376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.06■□□□□ 0.96
CCP110-207ENST00000565376 HNRNPUL2Q1KMD3 747 aaKnown RBP21.06■□□□□ 0.96
CCP110-207ENST00000565376 ZBTB22O15209 634 aa21.05■□□□□ 0.96
CCP110-207ENST00000565376 SAMD1Q6SPF0 538 aaPredicted RBP20.95■□□□□ 0.94
CCP110-207ENST00000565376 APLP2Q06481 763 aa20.92■□□□□ 0.94
CCP110-207ENST00000565376 EHMT2Q96KQ7 1210 aa20.86■□□□□ 0.93
CCP110-207ENST00000565376 SPINK5Q9NQ38 1064 aaPredicted RBP20.78■□□□□ 0.92
CCP110-207ENST00000565376 CAPN15O75808 1086 aa20.76■□□□□ 0.91
CCP110-207ENST00000565376 CSRNP3Q8WYN3 585 aa20.75■□□□□ 0.91
CCP110-207ENST00000565376 ZNF219Q9P2Y4 722 aaPredicted RBP20.62■□□□□ 0.89
CCP110-207ENST00000565376 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
CCP110-207ENST00000565376 ATXN8OSP0DMR3 200 aa20.53■□□□□ 0.88
CCP110-207ENST00000565376 DSG3P32926 999 aa20.46■□□□□ 0.87
CCP110-207ENST00000565376 ATF5Q9Y2D1 282 aaPredicted RBP20.44■□□□□ 0.86
CCP110-207ENST00000565376 ABCB7O75027 752 aa20.3■□□□□ 0.84
CCP110-207ENST00000565376 POLA2Q14181 598 aa20.19■□□□□ 0.82
CCP110-207ENST00000565376 ZBTB12Q9Y330 459 aaPredicted RBP19.92■□□□□ 0.78
CCP110-207ENST00000565376 FBLN2P98095 1184 aa19.71■□□□□ 0.75
CCP110-207ENST00000565376 RBM42Q9BTD8 480 aaKnown RBP19.58■□□□□ 0.72
CCP110-207ENST00000565376 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
CCP110-207ENST00000565376 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
CCP110-207ENST00000565376 SPDYE2BA6NHP3 402 aa19.33■□□□□ 0.68
CCP110-207ENST00000565376 SPDYE6P0CI01 402 aa19.33■□□□□ 0.68
CCP110-207ENST00000565376 SPDYE2Q495Y8 402 aa19.33■□□□□ 0.68
CCP110-207ENST00000565376 AKT1S1Q96B36 256 aa19.25■□□□□ 0.67
CCP110-207ENST00000565376 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
CCP110-207ENST00000565376 SSUH2Q9Y2M2 353 aa19.12■□□□□ 0.65
CCP110-207ENST00000565376 SPDYE4A6NLX3 237 aa19.04■□□□□ 0.64
CCP110-207ENST00000565376 REM2Q8IYK8 340 aaPredicted RBP19.03■□□□□ 0.64
CCP110-207ENST00000565376 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
CCP110-207ENST00000565376 SPDYE1Q8NFV5 336 aaPredicted RBP18.83■□□□□ 0.6
CCP110-207ENST00000565376 CHRDL2Q6WN34 429 aa18.82■□□□□ 0.6
CCP110-207ENST00000565376 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
CCP110-207ENST00000565376 FKBP8Q14318 412 aa18.79■□□□□ 0.6
CCP110-207ENST00000565376 CLEC11AQ9Y240 323 aa18.72■□□□□ 0.59
CCP110-207ENST00000565376 PROM2Q8N271 834 aa18.68■□□□□ 0.58
CCP110-207ENST00000565376 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
CCP110-207ENST00000565376 PRR29P0C7W0 189 aa18.53■□□□□ 0.56
CCP110-207ENST00000565376 FXR2P51116 673 aaKnown RBP eCLIP18.52■□□□□ 0.56
CCP110-207ENST00000565376 POTEHQ6S545 545 aa18.52■□□□□ 0.56
CCP110-207ENST00000565376 PIP4P2Q8N4L2 257 aa18.5■□□□□ 0.55
CCP110-207ENST00000565376 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
CCP110-207ENST00000565376 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
CCP110-207ENST00000565376 FBXO3Q9UK99 471 aa18.27■□□□□ 0.52
CCP110-207ENST00000565376 CHADLQ6NUI6 762 aa18.25■□□□□ 0.51
CCP110-207ENST00000565376 CREBZFQ9NS37 354 aa18.2■□□□□ 0.5
CCP110-207ENST00000565376 FARP1Q9Y4F1 1045 aaPredicted RBP18.1■□□□□ 0.49
CCP110-207ENST00000565376 MIER1Q8N108 512 aa18.09■□□□□ 0.49
CCP110-207ENST00000565376 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
CCP110-207ENST00000565376 PLCD3Q8N3E9 789 aa18.04■□□□□ 0.48
CCP110-207ENST00000565376 HAX1O00165 279 aa18■□□□□ 0.47
CCP110-207ENST00000565376 MNX1P50219 401 aaPredicted RBP17.97■□□□□ 0.47
CCP110-207ENST00000565376 VASPP50552 380 aaPredicted RBP17.97■□□□□ 0.47
CCP110-207ENST00000565376 ZCCHC6Q5VYS8 1495 aaKnown RBP17.95■□□□□ 0.46
CCP110-207ENST00000565376 NPM1P06748 294 aaKnown RBP eCLIP17.95■□□□□ 0.46
CCP110-207ENST00000565376 ZBTB47Q9UFB7 747 aaPredicted RBP17.91■□□□□ 0.46
CCP110-207ENST00000565376 C19orf67A6NJJ6 358 aa17.9■□□□□ 0.46
CCP110-207ENST00000565376 CD44P16070 742 aaKnown RBP17.81■□□□□ 0.44
CCP110-207ENST00000565376 EVX2Q03828 476 aa17.75■□□□□ 0.43
CCP110-207ENST00000565376 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
CCP110-207ENST00000565376 PAK3O75914 559 aaPredicted RBP17.73■□□□□ 0.43
CCP110-207ENST00000565376 SP7Q8TDD2 431 aaPredicted RBP17.7■□□□□ 0.42
CCP110-207ENST00000565376 IFNLR1Q8IU57 520 aaPredicted RBP17.68■□□□□ 0.42
CCP110-207ENST00000565376 ZRANB1Q9UGI0 708 aa17.67■□□□□ 0.42
CCP110-207ENST00000565376 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
CCP110-207ENST00000565376 NUBP1P53384 320 aa17.64■□□□□ 0.41
CCP110-207ENST00000565376 DCAF1Q9Y4B6 1507 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms