RNA–Protein interactions for RNA: ENST00000564585.1

LINC02280-201, Transcript of long intergenic non-protein coding RNA 2280, humanhuman

TSL 2 BASIC

Gene LINC02280, Length 3,816 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02280-201ENST00000564585 NISCHQ9Y2I1 1504 aa18.84■□□□□ 0.61
LINC02280-201ENST00000564585 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
LINC02280-201ENST00000564585 SHROOM4Q9ULL8 1493 aa17.39■□□□□ 0.37
LINC02280-201ENST00000564585 SUPT5HO00267 1087 aaKnown RBP17.31■□□□□ 0.36
LINC02280-201ENST00000564585 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
LINC02280-201ENST00000564585 FAM9AQ8IZU1 332 aaPredicted RBP16.2■□□□□ 0.18
LINC02280-201ENST00000564585 PCGF6Q9BYE7 350 aa16.17■□□□□ 0.18
LINC02280-201ENST00000564585 CHIC1Q5VXU3 224 aa16.05■□□□□ 0.16
LINC02280-201ENST00000564585 LOC105371045A0A1W2PR82 267 aa15.95■□□□□ 0.14
LINC02280-201ENST00000564585 TRIM41Q8WV44 630 aa15.92■□□□□ 0.14
LINC02280-201ENST00000564585 TTBK1Q5TCY1 1321 aaPredicted RBP15.84■□□□□ 0.13
LINC02280-201ENST00000564585 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
LINC02280-201ENST00000564585 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
LINC02280-201ENST00000564585 ABCC9O60706 1549 aa15.66■□□□□ 0.1
LINC02280-201ENST00000564585 RANGAP1P46060 587 aaPredicted RBP15.59■□□□□ 0.09
LINC02280-201ENST00000564585 HRCP23327 699 aa15.59■□□□□ 0.09
LINC02280-201ENST00000564585 TRIM26Q12899 539 aaPredicted RBP15.48■□□□□ 0.07
LINC02280-201ENST00000564585 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.07
LINC02280-201ENST00000564585 UBTFP17480 764 aaKnown RBP15.46■□□□□ 0.06
LINC02280-201ENST00000564585 PABPN1Q86U42 306 aaKnown RBP eCLIP15.41■□□□□ 0.06
LINC02280-201ENST00000564585 MYO15BQ96JP2 1530 aa15.41■□□□□ 0.06
LINC02280-201ENST00000564585 CCER1Q8TC90 406 aaPredicted RBP15.38■□□□□ 0.05
LINC02280-201ENST00000564585 APLP2Q06481 763 aa15.36■□□□□ 0.05
LINC02280-201ENST00000564585 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
LINC02280-201ENST00000564585 ZEB1P37275 1124 aaPredicted RBP15.26■□□□□ 0.03
LINC02280-201ENST00000564585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.18■□□□□ 0.02
LINC02280-201ENST00000564585 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
LINC02280-201ENST00000564585 ATP1B4Q9UN42 357 aaPredicted RBP15.09■□□□□ 0.01
LINC02280-201ENST00000564585 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
LINC02280-201ENST00000564585 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
LINC02280-201ENST00000564585 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
LINC02280-201ENST00000564585 DCAF1Q9Y4B6 1507 aa14.96□□□□□ -0.02
LINC02280-201ENST00000564585 ITGAEP38570 1179 aa14.96□□□□□ -0.02
LINC02280-201ENST00000564585 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
LINC02280-201ENST00000564585 CENPBP07199 599 aaPredicted RBP14.83□□□□□ -0.03
LINC02280-201ENST00000564585 RB1CC1Q8TDY2 1594 aa14.79□□□□□ -0.04
LINC02280-201ENST00000564585 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.05
LINC02280-201ENST00000564585 NACADO15069 1562 aa14.75□□□□□ -0.05
LINC02280-201ENST00000564585 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
LINC02280-201ENST00000564585 P3H3Q8IVL6 736 aa14.63□□□□□ -0.07
LINC02280-201ENST00000564585 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.08
LINC02280-201ENST00000564585 WIZO95785 1651 aa14.57□□□□□ -0.08
LINC02280-201ENST00000564585 SOGA1O94964 1423 aa14.57□□□□□ -0.08
LINC02280-201ENST00000564585 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
LINC02280-201ENST00000564585 CEP162Q5TB80 1403 aa14.54□□□□□ -0.08
LINC02280-201ENST00000564585 ABCC8Q09428 1581 aa14.54□□□□□ -0.08
LINC02280-201ENST00000564585 ZNF316A6NFI3 1004 aaPredicted RBP14.51□□□□□ -0.09
LINC02280-201ENST00000564585 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
LINC02280-201ENST00000564585 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
LINC02280-201ENST00000564585 WRNQ14191 1432 aaPredicted RBP eCLIP14.49□□□□□ -0.09
LINC02280-201ENST00000564585 GTF3C3Q9Y5Q9 886 aa14.49□□□□□ -0.09
LINC02280-201ENST00000564585 CLIP1P30622 1438 aa14.44□□□□□ -0.1
LINC02280-201ENST00000564585 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
LINC02280-201ENST00000564585 ARID3CA6NKF2 412 aa14.43□□□□□ -0.1
LINC02280-201ENST00000564585 TNIKQ9UKE5 1360 aa14.41□□□□□ -0.1
LINC02280-201ENST00000564585 BAZ1BQ9UIG0 1483 aaKnown RBP14.4□□□□□ -0.1
LINC02280-201ENST00000564585 CNGB1Q14028 1251 aaPredicted RBP14.39□□□□□ -0.11
LINC02280-201ENST00000564585 ACIN1Q9UKV3 1341 aaKnown RBP14.39□□□□□ -0.11
LINC02280-201ENST00000564585 GOLGA3Q08378 1498 aa14.37□□□□□ -0.11
LINC02280-201ENST00000564585 RUSC2Q8N2Y8 1516 aa14.36□□□□□ -0.11
LINC02280-201ENST00000564585 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
LINC02280-201ENST00000564585 EEA1Q15075 1411 aa14.33□□□□□ -0.12
LINC02280-201ENST00000564585 POLR3GLQ9BT43 218 aa14.31□□□□□ -0.12
LINC02280-201ENST00000564585 MIER1Q8N108 512 aa14.29□□□□□ -0.12
LINC02280-201ENST00000564585 TRIM52Q96A61 297 aa14.28□□□□□ -0.12
LINC02280-201ENST00000564585 TOP2AP11388 1531 aaKnown RBP14.28□□□□□ -0.12
LINC02280-201ENST00000564585 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
LINC02280-201ENST00000564585 FBLN2P98095 1184 aa14.25□□□□□ -0.13
LINC02280-201ENST00000564585 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
LINC02280-201ENST00000564585 NEFLP07196 543 aa14.23□□□□□ -0.13
LINC02280-201ENST00000564585 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
LINC02280-201ENST00000564585 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
LINC02280-201ENST00000564585 BCANQ96GW7 911 aa14.19□□□□□ -0.14
LINC02280-201ENST00000564585 KIF27Q86VH2 1401 aa14.16□□□□□ -0.14
LINC02280-201ENST00000564585 CHIC2Q9UKJ5 165 aa14.16□□□□□ -0.14
LINC02280-201ENST00000564585 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
LINC02280-201ENST00000564585 DDX10Q13206 875 aaKnown RBP14.15□□□□□ -0.14
LINC02280-201ENST00000564585 SMARCA2P51531 1590 aa14.14□□□□□ -0.15
LINC02280-201ENST00000564585 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
LINC02280-201ENST00000564585 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
LINC02280-201ENST00000564585 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
LINC02280-201ENST00000564585 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
LINC02280-201ENST00000564585 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
LINC02280-201ENST00000564585 CUX2O14529 1486 aa14.07□□□□□ -0.16
LINC02280-201ENST00000564585 ANP32CO43423 234 aa14.06□□□□□ -0.16
LINC02280-201ENST00000564585 MYT1LQ9UL68 1186 aa14.03□□□□□ -0.16
LINC02280-201ENST00000564585 CARMIL1Q5VZK9 1371 aa14.03□□□□□ -0.16
LINC02280-201ENST00000564585 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
LINC02280-201ENST00000564585 RRP7BPQ9NSQ0 103 aa14.02□□□□□ -0.17
LINC02280-201ENST00000564585 TONSLQ96HA7 1378 aa13.99□□□□□ -0.17
LINC02280-201ENST00000564585 CCNB3Q8WWL7 1395 aa13.98□□□□□ -0.17
LINC02280-201ENST00000564585 ERICH6Q7L0X2 663 aa13.94□□□□□ -0.18
LINC02280-201ENST00000564585 TDRD9Q8NDG6 1382 aaKnown RBP13.92□□□□□ -0.18
LINC02280-201ENST00000564585 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
LINC02280-201ENST00000564585 FKBP8Q14318 412 aa13.9□□□□□ -0.18
LINC02280-201ENST00000564585 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
LINC02280-201ENST00000564585 CDK11AQ9UQ88 783 aaPredicted RBP13.87□□□□□ -0.19
LINC02280-201ENST00000564585 HNRNPUQ00839 825 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC02280-201ENST00000564585 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
LINC02280-201ENST00000564585 RAB3GAP2Q9H2M9 1393 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms