RNA–Protein interactions for RNA: ENST00000564203.1

AC116553.2-201, humanhuman

BASIC

Gene AC116553.2, Length 463 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116553.2-201ENST00000564203 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
AC116553.2-201ENST00000564203 CHIC1Q5VXU3 224 aa21.88■■□□□ 1.09
AC116553.2-201ENST00000564203 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
AC116553.2-201ENST00000564203 SENP3Q9H4L4 574 aaPredicted RBP18.98■□□□□ 0.63
AC116553.2-201ENST00000564203 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
AC116553.2-201ENST00000564203 FOXD1Q16676 465 aa17.58■□□□□ 0.4
AC116553.2-201ENST00000564203 ADRA2BP18089 450 aa16.95■□□□□ 0.3
AC116553.2-201ENST00000564203 PPP6R1Q9UPN7 881 aa16.95■□□□□ 0.3
AC116553.2-201ENST00000564203 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
AC116553.2-201ENST00000564203 MSH5O43196 834 aa16.22■□□□□ 0.19
AC116553.2-201ENST00000564203 PPP4R3CPQ6ZMV5 832 aa15.69■□□□□ 0.1
AC116553.2-201ENST00000564203 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
AC116553.2-201ENST00000564203 KCNA4P22459 653 aa15.37■□□□□ 0.05
AC116553.2-201ENST00000564203 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
AC116553.2-201ENST00000564203 NCBP3Q53F19 620 aaKnown RBP15.32■□□□□ 0.04
AC116553.2-201ENST00000564203 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
AC116553.2-201ENST00000564203 DMRT2Q9Y5R5 561 aa15.14■□□□□ 0.01
AC116553.2-201ENST00000564203 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
AC116553.2-201ENST00000564203 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
AC116553.2-201ENST00000564203 HOXD11P31277 338 aaPredicted RBP14.85□□□□□ -0.03
AC116553.2-201ENST00000564203 POTEDQ86YR6 584 aa14.67□□□□□ -0.06
AC116553.2-201ENST00000564203 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
AC116553.2-201ENST00000564203 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
AC116553.2-201ENST00000564203 DCAF8L1A6NGE4 600 aa14.52□□□□□ -0.09
AC116553.2-201ENST00000564203 EHMT2Q96KQ7 1210 aa14.29□□□□□ -0.12
AC116553.2-201ENST00000564203 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
AC116553.2-201ENST00000564203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.17□□□□□ -0.14
AC116553.2-201ENST00000564203 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
AC116553.2-201ENST00000564203 ZBTB22O15209 634 aa14.12□□□□□ -0.15
AC116553.2-201ENST00000564203 CSRNP3Q8WYN3 585 aa14.1□□□□□ -0.15
AC116553.2-201ENST00000564203 MYCNP04198 464 aaPredicted RBP13.94□□□□□ -0.18
AC116553.2-201ENST00000564203 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
AC116553.2-201ENST00000564203 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
AC116553.2-201ENST00000564203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.8□□□□□ -0.2
AC116553.2-201ENST00000564203 HNRNPUL2Q1KMD3 747 aaKnown RBP13.8□□□□□ -0.2
AC116553.2-201ENST00000564203 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
AC116553.2-201ENST00000564203 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
AC116553.2-201ENST00000564203 APLP2Q06481 763 aa13.66□□□□□ -0.22
AC116553.2-201ENST00000564203 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
AC116553.2-201ENST00000564203 ATF5Q9Y2D1 282 aaPredicted RBP13.53□□□□□ -0.24
AC116553.2-201ENST00000564203 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.25
AC116553.2-201ENST00000564203 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
AC116553.2-201ENST00000564203 CAPN15O75808 1086 aa13.5□□□□□ -0.25
AC116553.2-201ENST00000564203 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
AC116553.2-201ENST00000564203 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
AC116553.2-201ENST00000564203 ABCB7O75027 752 aa13.23□□□□□ -0.29
AC116553.2-201ENST00000564203 DSG3P32926 999 aa13.23□□□□□ -0.29
AC116553.2-201ENST00000564203 POLA2Q14181 598 aa13.22□□□□□ -0.29
AC116553.2-201ENST00000564203 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
AC116553.2-201ENST00000564203 FBLN2P98095 1184 aa13.01□□□□□ -0.33
AC116553.2-201ENST00000564203 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
AC116553.2-201ENST00000564203 FKBP8Q14318 412 aa12.76□□□□□ -0.37
AC116553.2-201ENST00000564203 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
AC116553.2-201ENST00000564203 SPDYE4A6NLX3 237 aa12.71□□□□□ -0.37
AC116553.2-201ENST00000564203 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
AC116553.2-201ENST00000564203 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
AC116553.2-201ENST00000564203 SPDYE2Q495Y8 402 aa12.67□□□□□ -0.38
AC116553.2-201ENST00000564203 RBM42Q9BTD8 480 aaKnown RBP12.64□□□□□ -0.39
AC116553.2-201ENST00000564203 ZNF692Q9BU19 519 aaPredicted RBP12.63□□□□□ -0.39
AC116553.2-201ENST00000564203 SSUH2Q9Y2M2 353 aa12.56□□□□□ -0.4
AC116553.2-201ENST00000564203 AKT1S1Q96B36 256 aa12.49□□□□□ -0.41
AC116553.2-201ENST00000564203 PROM2Q8N271 834 aa12.47□□□□□ -0.41
AC116553.2-201ENST00000564203 PABPN1Q86U42 306 aaKnown RBP eCLIP12.46□□□□□ -0.41
AC116553.2-201ENST00000564203 REM2Q8IYK8 340 aaPredicted RBP12.35□□□□□ -0.43
AC116553.2-201ENST00000564203 FBXO3Q9UK99 471 aa12.31□□□□□ -0.44
AC116553.2-201ENST00000564203 SPDYE1Q8NFV5 336 aaPredicted RBP12.29□□□□□ -0.44
AC116553.2-201ENST00000564203 STAG3Q9UJ98 1225 aa12.28□□□□□ -0.44
AC116553.2-201ENST00000564203 CLEC11AQ9Y240 323 aa12.24□□□□□ -0.45
AC116553.2-201ENST00000564203 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
AC116553.2-201ENST00000564203 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
AC116553.2-201ENST00000564203 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
AC116553.2-201ENST00000564203 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
AC116553.2-201ENST00000564203 MIER1Q8N108 512 aa12.05□□□□□ -0.48
AC116553.2-201ENST00000564203 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
AC116553.2-201ENST00000564203 PLEKHG5O94827 1062 aa12.02□□□□□ -0.49
AC116553.2-201ENST00000564203 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
AC116553.2-201ENST00000564203 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
AC116553.2-201ENST00000564203 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
AC116553.2-201ENST00000564203 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
AC116553.2-201ENST00000564203 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
AC116553.2-201ENST00000564203 PRKAR2AP13861 404 aaKnown RBP11.91□□□□□ -0.5
AC116553.2-201ENST00000564203 CHADLQ6NUI6 762 aa11.91□□□□□ -0.5
AC116553.2-201ENST00000564203 ZBTB47Q9UFB7 747 aaPredicted RBP11.91□□□□□ -0.5
AC116553.2-201ENST00000564203 MNX1P50219 401 aaPredicted RBP11.83□□□□□ -0.52
AC116553.2-201ENST00000564203 SPOCK2Q92563 424 aa11.83□□□□□ -0.52
AC116553.2-201ENST00000564203 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
AC116553.2-201ENST00000564203 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
AC116553.2-201ENST00000564203 AMER1Q5JTC6 1135 aaPredicted RBP11.73□□□□□ -0.53
AC116553.2-201ENST00000564203 NUBP1P53384 320 aa11.72□□□□□ -0.53
AC116553.2-201ENST00000564203 RTN4Q9NQC3 1192 aaKnown RBP11.66□□□□□ -0.54
AC116553.2-201ENST00000564203 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
AC116553.2-201ENST00000564203 FAM212AQ96EL1 285 aa11.65□□□□□ -0.54
AC116553.2-201ENST00000564203 DCAF8Q5TAQ9 597 aa11.64□□□□□ -0.55
AC116553.2-201ENST00000564203 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
AC116553.2-201ENST00000564203 GSE1Q14687 1217 aa11.63□□□□□ -0.55
AC116553.2-201ENST00000564203 POTEHQ6S545 545 aa11.63□□□□□ -0.55
AC116553.2-201ENST00000564203 PAK3O75914 559 aaPredicted RBP11.6□□□□□ -0.55
AC116553.2-201ENST00000564203 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
AC116553.2-201ENST00000564203 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
AC116553.2-201ENST00000564203 C19orf67A6NJJ6 358 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms