RNA–Protein interactions for RNA: ENST00000563730.1

ITFG1-206, Transcript of integrin alpha FG-GAP repeat containing 1, humanhuman

TSL 4

Gene ITFG1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITFG1-206ENST00000563730 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
ITFG1-206ENST00000563730 CHIC1Q5VXU3 224 aa27.37■■□□□ 1.97
ITFG1-206ENST00000563730 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
ITFG1-206ENST00000563730 PHF23Q9BUL5 403 aaPredicted RBP23.94■■□□□ 1.42
ITFG1-206ENST00000563730 FOXD1Q16676 465 aa22.42■■□□□ 1.18
ITFG1-206ENST00000563730 PLPPR3Q6T4P5 718 aa22.11■■□□□ 1.13
ITFG1-206ENST00000563730 POTEDQ86YR6 584 aa21.22■□□□□ 0.99
ITFG1-206ENST00000563730 PPP6R1Q9UPN7 881 aa21.21■□□□□ 0.99
ITFG1-206ENST00000563730 ADRA2BP18089 450 aa21.18■□□□□ 0.98
ITFG1-206ENST00000563730 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
ITFG1-206ENST00000563730 MSH5O43196 834 aa20.95■□□□□ 0.94
ITFG1-206ENST00000563730 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
ITFG1-206ENST00000563730 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
ITFG1-206ENST00000563730 MAPK8IP2Q13387 824 aaPredicted RBP19.3■□□□□ 0.68
ITFG1-206ENST00000563730 DMRT2Q9Y5R5 561 aa19.24■□□□□ 0.67
ITFG1-206ENST00000563730 CNKSR2Q8WXI2 1034 aa18.97■□□□□ 0.63
ITFG1-206ENST00000563730 NCBP3Q53F19 620 aaKnown RBP18.84■□□□□ 0.61
ITFG1-206ENST00000563730 HOXD11P31277 338 aaPredicted RBP18.71■□□□□ 0.59
ITFG1-206ENST00000563730 RNF216Q9NWF9 866 aaPredicted RBP18.69■□□□□ 0.58
ITFG1-206ENST00000563730 NPM3O75607 178 aaKnown RBP18.46■□□□□ 0.55
ITFG1-206ENST00000563730 KCNA4P22459 653 aa18.43■□□□□ 0.54
ITFG1-206ENST00000563730 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
ITFG1-206ENST00000563730 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
ITFG1-206ENST00000563730 DNAJC5BQ9UF47 199 aa18.15■□□□□ 0.5
ITFG1-206ENST00000563730 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
ITFG1-206ENST00000563730 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.44
ITFG1-206ENST00000563730 C1QBPQ07021 282 aaKnown RBP17.67■□□□□ 0.42
ITFG1-206ENST00000563730 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
ITFG1-206ENST00000563730 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
ITFG1-206ENST00000563730 U3KPZ7 1027 aaPredicted RBP17.44■□□□□ 0.38
ITFG1-206ENST00000563730 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
ITFG1-206ENST00000563730 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
ITFG1-206ENST00000563730 APLP2Q06481 763 aa17.19■□□□□ 0.34
ITFG1-206ENST00000563730 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
ITFG1-206ENST00000563730 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
ITFG1-206ENST00000563730 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
ITFG1-206ENST00000563730 CAPN15O75808 1086 aa17.02■□□□□ 0.32
ITFG1-206ENST00000563730 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
ITFG1-206ENST00000563730 ZNF219Q9P2Y4 722 aaPredicted RBP16.93■□□□□ 0.3
ITFG1-206ENST00000563730 ZBTB22O15209 634 aa16.91■□□□□ 0.3
ITFG1-206ENST00000563730 DSG3P32926 999 aa16.84■□□□□ 0.29
ITFG1-206ENST00000563730 TRHP20396 242 aaPredicted RBP16.82■□□□□ 0.28
ITFG1-206ENST00000563730 ATXN8OSP0DMR3 200 aa16.68■□□□□ 0.26
ITFG1-206ENST00000563730 ABCB7O75027 752 aa16.59■□□□□ 0.25
ITFG1-206ENST00000563730 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
ITFG1-206ENST00000563730 CSRNP3Q8WYN3 585 aa16.55■□□□□ 0.24
ITFG1-206ENST00000563730 POTEHQ6S545 545 aa16.53■□□□□ 0.24
ITFG1-206ENST00000563730 EHMT2Q96KQ7 1210 aa16.5■□□□□ 0.23
ITFG1-206ENST00000563730 POLA2Q14181 598 aa16.48■□□□□ 0.23
ITFG1-206ENST00000563730 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.2
ITFG1-206ENST00000563730 RBM42Q9BTD8 480 aaKnown RBP16.17■□□□□ 0.18
ITFG1-206ENST00000563730 FBLN2P98095 1184 aa16.05■□□□□ 0.16
ITFG1-206ENST00000563730 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
ITFG1-206ENST00000563730 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
ITFG1-206ENST00000563730 AKT1S1Q96B36 256 aa15.85■□□□□ 0.13
ITFG1-206ENST00000563730 SPDYE2BA6NHP3 402 aa15.81■□□□□ 0.12
ITFG1-206ENST00000563730 SPDYE6P0CI01 402 aa15.81■□□□□ 0.12
ITFG1-206ENST00000563730 SPDYE2Q495Y8 402 aa15.81■□□□□ 0.12
ITFG1-206ENST00000563730 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
ITFG1-206ENST00000563730 REM2Q8IYK8 340 aaPredicted RBP15.62■□□□□ 0.09
ITFG1-206ENST00000563730 SSUH2Q9Y2M2 353 aa15.6■□□□□ 0.09
ITFG1-206ENST00000563730 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
ITFG1-206ENST00000563730 PITPNM1O00562 1244 aa15.43■□□□□ 0.06
ITFG1-206ENST00000563730 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
ITFG1-206ENST00000563730 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
ITFG1-206ENST00000563730 SPDYE4A6NLX3 237 aa15.38■□□□□ 0.05
ITFG1-206ENST00000563730 CLEC11AQ9Y240 323 aa15.29■□□□□ 0.04
ITFG1-206ENST00000563730 FXR2P51116 673 aaKnown RBP eCLIP15.27■□□□□ 0.04
ITFG1-206ENST00000563730 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
ITFG1-206ENST00000563730 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
ITFG1-206ENST00000563730 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
ITFG1-206ENST00000563730 PRR29P0C7W0 189 aa15.15■□□□□ 0.02
ITFG1-206ENST00000563730 PROM2Q8N271 834 aa15.11■□□□□ 0.01
ITFG1-206ENST00000563730 PRKAR2AP13861 404 aaKnown RBP15.06■□□□□ 0
ITFG1-206ENST00000563730 FKBP8Q14318 412 aa14.99□□□□□ -0.01
ITFG1-206ENST00000563730 CHADLQ6NUI6 762 aa14.9□□□□□ -0.02
ITFG1-206ENST00000563730 HAX1O00165 279 aa14.87□□□□□ -0.03
ITFG1-206ENST00000563730 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
ITFG1-206ENST00000563730 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
ITFG1-206ENST00000563730 C19orf67A6NJJ6 358 aa14.76□□□□□ -0.05
ITFG1-206ENST00000563730 FBXO3Q9UK99 471 aa14.7□□□□□ -0.06
ITFG1-206ENST00000563730 PLEKHG5O94827 1062 aa14.69□□□□□ -0.06
ITFG1-206ENST00000563730 NPM1P06748 294 aaKnown RBP eCLIP14.67□□□□□ -0.06
ITFG1-206ENST00000563730 MNX1P50219 401 aaPredicted RBP14.62□□□□□ -0.07
ITFG1-206ENST00000563730 CD44P16070 742 aaKnown RBP14.61□□□□□ -0.07
ITFG1-206ENST00000563730 EVX2Q03828 476 aa14.61□□□□□ -0.07
ITFG1-206ENST00000563730 MIER1Q8N108 512 aa14.61□□□□□ -0.07
ITFG1-206ENST00000563730 PLCD3Q8N3E9 789 aa14.56□□□□□ -0.08
ITFG1-206ENST00000563730 ZBTB47Q9UFB7 747 aaPredicted RBP14.55□□□□□ -0.08
ITFG1-206ENST00000563730 CLCN6P51797 869 aa14.53□□□□□ -0.08
ITFG1-206ENST00000563730 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
ITFG1-206ENST00000563730 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
ITFG1-206ENST00000563730 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
ITFG1-206ENST00000563730 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
ITFG1-206ENST00000563730 GABBR2O75899 941 aa14.4□□□□□ -0.1
ITFG1-206ENST00000563730 NUBP1P53384 320 aa14.29□□□□□ -0.12
ITFG1-206ENST00000563730 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
ITFG1-206ENST00000563730 LHX8Q68G74 356 aa14.27□□□□□ -0.13
ITFG1-206ENST00000563730 RASEFQ8IZ41 740 aa14.27□□□□□ -0.13
ITFG1-206ENST00000563730 CCDC61Q9Y6R9 512 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 169.7 ms