RNA–Protein interactions for RNA: ENST00000563639.2

AC027458.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC027458.1, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027458.1-201ENST00000563639 AEBP2Q6ZN18 517 aaPredicted RBP36.07■■■■□ 3.36
AC027458.1-201ENST00000563639 CHIC1Q5VXU3 224 aa34.87■■■■□ 3.17
AC027458.1-201ENST00000563639 PHF23Q9BUL5 403 aaPredicted RBP30.68■■■□□ 2.5
AC027458.1-201ENST00000563639 SENP3Q9H4L4 574 aaPredicted RBP30.59■■■□□ 2.49
AC027458.1-201ENST00000563639 FOXD1Q16676 465 aa28.47■■■□□ 2.15
AC027458.1-201ENST00000563639 PLPPR3Q6T4P5 718 aa28.14■■■□□ 2.1
AC027458.1-201ENST00000563639 PPP6R1Q9UPN7 881 aa27.18■■□□□ 1.94
AC027458.1-201ENST00000563639 ADRA2BP18089 450 aa27.11■■□□□ 1.93
AC027458.1-201ENST00000563639 PIAS4Q8N2W9 510 aaPredicted RBP26.74■■□□□ 1.87
AC027458.1-201ENST00000563639 MSH5O43196 834 aa26.32■■□□□ 1.8
AC027458.1-201ENST00000563639 POTEDQ86YR6 584 aa25.12■■□□□ 1.61
AC027458.1-201ENST00000563639 PPP4R3CPQ6ZMV5 832 aa24.77■■□□□ 1.56
AC027458.1-201ENST00000563639 SCAF1Q9H7N4 1312 aaKnown RBP24.71■■□□□ 1.55
AC027458.1-201ENST00000563639 MAPK8IP2Q13387 824 aaPredicted RBP24.7■■□□□ 1.54
AC027458.1-201ENST00000563639 DMRT2Q9Y5R5 561 aa24.39■■□□□ 1.49
AC027458.1-201ENST00000563639 CNKSR2Q8WXI2 1034 aa24.13■■□□□ 1.45
AC027458.1-201ENST00000563639 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
AC027458.1-201ENST00000563639 KCNA4P22459 653 aa23.85■■□□□ 1.41
AC027458.1-201ENST00000563639 HOXD11P31277 338 aaPredicted RBP23.76■■□□□ 1.39
AC027458.1-201ENST00000563639 RNF216Q9NWF9 866 aaPredicted RBP23.74■■□□□ 1.39
AC027458.1-201ENST00000563639 NPM3O75607 178 aaKnown RBP23.69■■□□□ 1.38
AC027458.1-201ENST00000563639 DCAF8L1A6NGE4 600 aa23.31■■□□□ 1.32
AC027458.1-201ENST00000563639 DNAJC5BQ9UF47 199 aa23.05■■□□□ 1.28
AC027458.1-201ENST00000563639 SLC4A1APQ9BWU0 796 aaKnown RBP22.61■■□□□ 1.21
AC027458.1-201ENST00000563639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.6■■□□□ 1.21
AC027458.1-201ENST00000563639 RNF39Q9H2S5 420 aa22.58■■□□□ 1.21
AC027458.1-201ENST00000563639 SLC4A2P04920 1241 aa22.48■■□□□ 1.19
AC027458.1-201ENST00000563639 C1QBPQ07021 282 aaKnown RBP22.25■■□□□ 1.15
AC027458.1-201ENST00000563639 U3KPZ7 1027 aaPredicted RBP22.25■■□□□ 1.15
AC027458.1-201ENST00000563639 CACNB1Q02641 598 aaPredicted RBP22.18■■□□□ 1.14
AC027458.1-201ENST00000563639 FOXD4L1Q9NU39 408 aa22.01■■□□□ 1.11
AC027458.1-201ENST00000563639 ZBTB22O15209 634 aa21.99■■□□□ 1.11
AC027458.1-201ENST00000563639 MYCNP04198 464 aaPredicted RBP21.87■■□□□ 1.09
AC027458.1-201ENST00000563639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.78■■□□□ 1.08
AC027458.1-201ENST00000563639 HNRNPUL2Q1KMD3 747 aaKnown RBP21.78■■□□□ 1.08
AC027458.1-201ENST00000563639 SPINK5Q9NQ38 1064 aaPredicted RBP21.74■■□□□ 1.07
AC027458.1-201ENST00000563639 SAMD1Q6SPF0 538 aaPredicted RBP21.7■■□□□ 1.06
AC027458.1-201ENST00000563639 CAPN15O75808 1086 aa21.61■■□□□ 1.05
AC027458.1-201ENST00000563639 APLP2Q06481 763 aa21.6■■□□□ 1.05
AC027458.1-201ENST00000563639 EHMT2Q96KQ7 1210 aa21.6■■□□□ 1.05
AC027458.1-201ENST00000563639 CSRNP3Q8WYN3 585 aa21.54■■□□□ 1.04
AC027458.1-201ENST00000563639 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
AC027458.1-201ENST00000563639 ZNF219Q9P2Y4 722 aaPredicted RBP21.41■■□□□ 1.02
AC027458.1-201ENST00000563639 DSG3P32926 999 aa21.37■■□□□ 1.01
AC027458.1-201ENST00000563639 ATF5Q9Y2D1 282 aaPredicted RBP21.37■■□□□ 1.01
AC027458.1-201ENST00000563639 ATXN8OSP0DMR3 200 aa21.26■□□□□ 0.99
AC027458.1-201ENST00000563639 ABCB7O75027 752 aa21.2■□□□□ 0.98
AC027458.1-201ENST00000563639 POLA2Q14181 598 aa21.03■□□□□ 0.96
AC027458.1-201ENST00000563639 ZBTB12Q9Y330 459 aaPredicted RBP20.61■□□□□ 0.89
AC027458.1-201ENST00000563639 MKRN4PQ13434 485 aaPredicted RBP20.42■□□□□ 0.86
AC027458.1-201ENST00000563639 FBLN2P98095 1184 aa20.39■□□□□ 0.85
AC027458.1-201ENST00000563639 OSCARQ8IYS5 282 aa20.34■□□□□ 0.85
AC027458.1-201ENST00000563639 RBM42Q9BTD8 480 aaKnown RBP20.31■□□□□ 0.84
AC027458.1-201ENST00000563639 SPDYE2BA6NHP3 402 aa20.07■□□□□ 0.8
AC027458.1-201ENST00000563639 SPDYE6P0CI01 402 aa20.07■□□□□ 0.8
AC027458.1-201ENST00000563639 SPDYE2Q495Y8 402 aa20.07■□□□□ 0.8
AC027458.1-201ENST00000563639 AKT1S1Q96B36 256 aa20.02■□□□□ 0.8
AC027458.1-201ENST00000563639 ZNF692Q9BU19 519 aaPredicted RBP19.93■□□□□ 0.78
AC027458.1-201ENST00000563639 SSUH2Q9Y2M2 353 aa19.9■□□□□ 0.78
AC027458.1-201ENST00000563639 REM2Q8IYK8 340 aaPredicted RBP19.85■□□□□ 0.77
AC027458.1-201ENST00000563639 SPDYE4A6NLX3 237 aa19.75■□□□□ 0.75
AC027458.1-201ENST00000563639 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
AC027458.1-201ENST00000563639 CHRDL2Q6WN34 429 aa19.64■□□□□ 0.73
AC027458.1-201ENST00000563639 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
AC027458.1-201ENST00000563639 POTEHQ6S545 545 aa19.61■□□□□ 0.73
AC027458.1-201ENST00000563639 SPDYE1Q8NFV5 336 aaPredicted RBP19.53■□□□□ 0.72
AC027458.1-201ENST00000563639 CLEC11AQ9Y240 323 aa19.47■□□□□ 0.71
AC027458.1-201ENST00000563639 FKBP8Q14318 412 aa19.46■□□□□ 0.71
AC027458.1-201ENST00000563639 PROM2Q8N271 834 aa19.42■□□□□ 0.7
AC027458.1-201ENST00000563639 PIP4P2Q8N4L2 257 aa19.33■□□□□ 0.68
AC027458.1-201ENST00000563639 FXR2P51116 673 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC027458.1-201ENST00000563639 PRR29P0C7W0 189 aa19.24■□□□□ 0.67
AC027458.1-201ENST00000563639 STAG3Q9UJ98 1225 aa19.23■□□□□ 0.67
AC027458.1-201ENST00000563639 PRKAR2AP13861 404 aaKnown RBP19.12■□□□□ 0.65
AC027458.1-201ENST00000563639 CHADLQ6NUI6 762 aa19.07■□□□□ 0.64
AC027458.1-201ENST00000563639 CREBZFQ9NS37 354 aa18.97■□□□□ 0.63
AC027458.1-201ENST00000563639 FARP1Q9Y4F1 1045 aaPredicted RBP18.84■□□□□ 0.61
AC027458.1-201ENST00000563639 FBXO3Q9UK99 471 aa18.82■□□□□ 0.6
AC027458.1-201ENST00000563639 HAX1O00165 279 aa18.76■□□□□ 0.59
AC027458.1-201ENST00000563639 MNX1P50219 401 aaPredicted RBP18.76■□□□□ 0.59
AC027458.1-201ENST00000563639 MIER1Q8N108 512 aa18.75■□□□□ 0.59
AC027458.1-201ENST00000563639 C19orf67A6NJJ6 358 aa18.68■□□□□ 0.58
AC027458.1-201ENST00000563639 PLCD3Q8N3E9 789 aa18.68■□□□□ 0.58
AC027458.1-201ENST00000563639 EVX2Q03828 476 aa18.65■□□□□ 0.58
AC027458.1-201ENST00000563639 PLEKHG5O94827 1062 aa18.62■□□□□ 0.57
AC027458.1-201ENST00000563639 VASPP50552 380 aaPredicted RBP18.62■□□□□ 0.57
AC027458.1-201ENST00000563639 NPM1P06748 294 aaKnown RBP eCLIP18.58■□□□□ 0.56
AC027458.1-201ENST00000563639 CD44P16070 742 aaKnown RBP18.54■□□□□ 0.56
AC027458.1-201ENST00000563639 SP7Q8TDD2 431 aaPredicted RBP18.5■□□□□ 0.55
AC027458.1-201ENST00000563639 ZBTB47Q9UFB7 747 aaPredicted RBP18.46■□□□□ 0.55
AC027458.1-201ENST00000563639 ZRANB1Q9UGI0 708 aa18.38■□□□□ 0.53
AC027458.1-201ENST00000563639 IFNLR1Q8IU57 520 aaPredicted RBP18.37■□□□□ 0.53
AC027458.1-201ENST00000563639 NUBP1P53384 320 aa18.35■□□□□ 0.53
AC027458.1-201ENST00000563639 RASEFQ8IZ41 740 aa18.35■□□□□ 0.53
AC027458.1-201ENST00000563639 PAK3O75914 559 aaPredicted RBP18.33■□□□□ 0.52
AC027458.1-201ENST00000563639 KLHL34Q8N239 644 aa18.33■□□□□ 0.52
AC027458.1-201ENST00000563639 ZNF579Q8NAF0 562 aaKnown RBP18.3■□□□□ 0.52
AC027458.1-201ENST00000563639 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
AC027458.1-201ENST00000563639 GABBR2O75899 941 aa18.23■□□□□ 0.51
AC027458.1-201ENST00000563639 PHF12Q96QT6 1004 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms