RNA–Protein interactions for RNA: ENST00000563557.1

AC009097.3-201, humanhuman

BASIC

Gene AC009097.3, Length 1,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009097.3-201ENST00000563557 AEBP2Q6ZN18 517 aaPredicted RBP26.71■■□□□ 1.87
AC009097.3-201ENST00000563557 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
AC009097.3-201ENST00000563557 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
AC009097.3-201ENST00000563557 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
AC009097.3-201ENST00000563557 FOXD1Q16676 465 aa21.09■□□□□ 0.97
AC009097.3-201ENST00000563557 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
AC009097.3-201ENST00000563557 POTEDQ86YR6 584 aa20.86■□□□□ 0.93
AC009097.3-201ENST00000563557 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
AC009097.3-201ENST00000563557 ADRA2BP18089 450 aa20.18■□□□□ 0.82
AC009097.3-201ENST00000563557 PIAS4Q8N2W9 510 aaPredicted RBP19.83■□□□□ 0.77
AC009097.3-201ENST00000563557 MSH5O43196 834 aa19.49■□□□□ 0.71
AC009097.3-201ENST00000563557 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
AC009097.3-201ENST00000563557 SCAF1Q9H7N4 1312 aaKnown RBP18.49■□□□□ 0.55
AC009097.3-201ENST00000563557 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
AC009097.3-201ENST00000563557 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
AC009097.3-201ENST00000563557 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
AC009097.3-201ENST00000563557 NCBP3Q53F19 620 aaKnown RBP18.01■□□□□ 0.47
AC009097.3-201ENST00000563557 KCNA4P22459 653 aa17.93■□□□□ 0.46
AC009097.3-201ENST00000563557 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
AC009097.3-201ENST00000563557 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
AC009097.3-201ENST00000563557 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
AC009097.3-201ENST00000563557 DCAF8L1A6NGE4 600 aa17.35■□□□□ 0.37
AC009097.3-201ENST00000563557 CACNB1Q02641 598 aaPredicted RBP17.27■□□□□ 0.36
AC009097.3-201ENST00000563557 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
AC009097.3-201ENST00000563557 SLC4A1APQ9BWU0 796 aaKnown RBP17.06■□□□□ 0.32
AC009097.3-201ENST00000563557 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.87■□□□□ 0.29
AC009097.3-201ENST00000563557 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
AC009097.3-201ENST00000563557 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
AC009097.3-201ENST00000563557 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
AC009097.3-201ENST00000563557 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
AC009097.3-201ENST00000563557 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
AC009097.3-201ENST00000563557 ZBTB22O15209 634 aa16.47■□□□□ 0.23
AC009097.3-201ENST00000563557 EHMT2Q96KQ7 1210 aa16.41■□□□□ 0.22
AC009097.3-201ENST00000563557 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
AC009097.3-201ENST00000563557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
AC009097.3-201ENST00000563557 HNRNPUL2Q1KMD3 747 aaKnown RBP16.31■□□□□ 0.2
AC009097.3-201ENST00000563557 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
AC009097.3-201ENST00000563557 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
AC009097.3-201ENST00000563557 APLP2Q06481 763 aa16.17■□□□□ 0.18
AC009097.3-201ENST00000563557 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
AC009097.3-201ENST00000563557 POTEHQ6S545 545 aa16.11■□□□□ 0.17
AC009097.3-201ENST00000563557 CAPN15O75808 1086 aa16.09■□□□□ 0.17
AC009097.3-201ENST00000563557 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
AC009097.3-201ENST00000563557 ATXN8OSP0DMR3 200 aa15.98■□□□□ 0.15
AC009097.3-201ENST00000563557 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
AC009097.3-201ENST00000563557 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
AC009097.3-201ENST00000563557 DSG3P32926 999 aa15.83■□□□□ 0.12
AC009097.3-201ENST00000563557 ABCB7O75027 752 aa15.76■□□□□ 0.11
AC009097.3-201ENST00000563557 POLA2Q14181 598 aa15.71■□□□□ 0.11
AC009097.3-201ENST00000563557 ZBTB12Q9Y330 459 aaPredicted RBP15.4■□□□□ 0.06
AC009097.3-201ENST00000563557 FBLN2P98095 1184 aa15.31■□□□□ 0.04
AC009097.3-201ENST00000563557 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
AC009097.3-201ENST00000563557 OSCARQ8IYS5 282 aa15.12■□□□□ 0.01
AC009097.3-201ENST00000563557 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
AC009097.3-201ENST00000563557 SPDYE2BA6NHP3 402 aa14.98□□□□□ -0.01
AC009097.3-201ENST00000563557 SPDYE6P0CI01 402 aa14.98□□□□□ -0.01
AC009097.3-201ENST00000563557 SPDYE2Q495Y8 402 aa14.98□□□□□ -0.01
AC009097.3-201ENST00000563557 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
AC009097.3-201ENST00000563557 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
AC009097.3-201ENST00000563557 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
AC009097.3-201ENST00000563557 SSUH2Q9Y2M2 353 aa14.83□□□□□ -0.04
AC009097.3-201ENST00000563557 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
AC009097.3-201ENST00000563557 FKBP8Q14318 412 aa14.74□□□□□ -0.05
AC009097.3-201ENST00000563557 PABPN1Q86U42 306 aaKnown RBP eCLIP14.72□□□□□ -0.05
AC009097.3-201ENST00000563557 SPDYE1Q8NFV5 336 aaPredicted RBP14.58□□□□□ -0.08
AC009097.3-201ENST00000563557 SP7Q8TDD2 431 aaPredicted RBP14.57□□□□□ -0.08
AC009097.3-201ENST00000563557 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
AC009097.3-201ENST00000563557 PROM2Q8N271 834 aa14.56□□□□□ -0.08
AC009097.3-201ENST00000563557 CLEC11AQ9Y240 323 aa14.54□□□□□ -0.08
AC009097.3-201ENST00000563557 CHRDL2Q6WN34 429 aa14.52□□□□□ -0.09
AC009097.3-201ENST00000563557 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
AC009097.3-201ENST00000563557 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
AC009097.3-201ENST00000563557 FXR2P51116 673 aaKnown RBP eCLIP14.33□□□□□ -0.12
AC009097.3-201ENST00000563557 PIP4P2Q8N4L2 257 aa14.31□□□□□ -0.12
AC009097.3-201ENST00000563557 FBXO3Q9UK99 471 aa14.27□□□□□ -0.13
AC009097.3-201ENST00000563557 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.13
AC009097.3-201ENST00000563557 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
AC009097.3-201ENST00000563557 CREBZFQ9NS37 354 aa14.16□□□□□ -0.14
AC009097.3-201ENST00000563557 MIER1Q8N108 512 aa14.14□□□□□ -0.15
AC009097.3-201ENST00000563557 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
AC009097.3-201ENST00000563557 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
AC009097.3-201ENST00000563557 VASPP50552 380 aaPredicted RBP14.05□□□□□ -0.16
AC009097.3-201ENST00000563557 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
AC009097.3-201ENST00000563557 MNX1P50219 401 aaPredicted RBP13.98□□□□□ -0.17
AC009097.3-201ENST00000563557 NPM1P06748 294 aaKnown RBP eCLIP13.94□□□□□ -0.18
AC009097.3-201ENST00000563557 HAX1O00165 279 aa13.93□□□□□ -0.18
AC009097.3-201ENST00000563557 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
AC009097.3-201ENST00000563557 KLHL34Q8N239 644 aa13.9□□□□□ -0.18
AC009097.3-201ENST00000563557 IFNLR1Q8IU57 520 aaPredicted RBP13.86□□□□□ -0.19
AC009097.3-201ENST00000563557 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
AC009097.3-201ENST00000563557 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
AC009097.3-201ENST00000563557 EVX2Q03828 476 aa13.78□□□□□ -0.2
AC009097.3-201ENST00000563557 NUBP1P53384 320 aa13.76□□□□□ -0.21
AC009097.3-201ENST00000563557 SPOCK2Q92563 424 aa13.73□□□□□ -0.21
AC009097.3-201ENST00000563557 PAK3O75914 559 aaPredicted RBP13.72□□□□□ -0.21
AC009097.3-201ENST00000563557 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
AC009097.3-201ENST00000563557 ZRANB1Q9UGI0 708 aa13.71□□□□□ -0.21
AC009097.3-201ENST00000563557 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
AC009097.3-201ENST00000563557 DCAF8Q5TAQ9 597 aa13.65□□□□□ -0.22
AC009097.3-201ENST00000563557 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms