RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
LINC01416-201ENST00000563553 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
LINC01416-201ENST00000563553 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
LINC01416-201ENST00000563553 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
LINC01416-201ENST00000563553 FOXD1Q16676 465 aa15.3■□□□□ 0.04
LINC01416-201ENST00000563553 PLPPR3Q6T4P5 718 aa14.75□□□□□ -0.05
LINC01416-201ENST00000563553 PPP6R1Q9UPN7 881 aa14.49□□□□□ -0.09
LINC01416-201ENST00000563553 ADRA2BP18089 450 aa14.39□□□□□ -0.11
LINC01416-201ENST00000563553 PIAS4Q8N2W9 510 aaPredicted RBP14.26□□□□□ -0.13
LINC01416-201ENST00000563553 MSH5O43196 834 aa14.13□□□□□ -0.15
LINC01416-201ENST00000563553 POTEDQ86YR6 584 aa14.03□□□□□ -0.16
LINC01416-201ENST00000563553 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
LINC01416-201ENST00000563553 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
LINC01416-201ENST00000563553 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
LINC01416-201ENST00000563553 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
LINC01416-201ENST00000563553 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
LINC01416-201ENST00000563553 HOXD11P31277 338 aaPredicted RBP12.63□□□□□ -0.39
LINC01416-201ENST00000563553 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
LINC01416-201ENST00000563553 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
LINC01416-201ENST00000563553 NPM3O75607 178 aaKnown RBP12.4□□□□□ -0.42
LINC01416-201ENST00000563553 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
LINC01416-201ENST00000563553 KCNA4P22459 653 aa12.32□□□□□ -0.44
LINC01416-201ENST00000563553 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
LINC01416-201ENST00000563553 DNAJC5BQ9UF47 199 aa12.12□□□□□ -0.47
LINC01416-201ENST00000563553 CACNB1Q02641 598 aaPredicted RBP12.02□□□□□ -0.49
LINC01416-201ENST00000563553 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
LINC01416-201ENST00000563553 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC01416-201ENST00000563553 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
LINC01416-201ENST00000563553 U3KPZ7 1027 aaPredicted RBP11.81□□□□□ -0.52
LINC01416-201ENST00000563553 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
LINC01416-201ENST00000563553 SLC4A1APQ9BWU0 796 aaKnown RBP11.58□□□□□ -0.56
LINC01416-201ENST00000563553 CAPN15O75808 1086 aa11.45□□□□□ -0.58
LINC01416-201ENST00000563553 DSG3P32926 999 aa11.45□□□□□ -0.58
LINC01416-201ENST00000563553 ZBTB22O15209 634 aa11.41□□□□□ -0.58
LINC01416-201ENST00000563553 MYCNP04198 464 aaPredicted RBP11.38□□□□□ -0.59
LINC01416-201ENST00000563553 FOXD4L1Q9NU39 408 aa11.37□□□□□ -0.59
LINC01416-201ENST00000563553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
LINC01416-201ENST00000563553 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
LINC01416-201ENST00000563553 SAMD1Q6SPF0 538 aaPredicted RBP11.35□□□□□ -0.59
LINC01416-201ENST00000563553 TRHP20396 242 aaPredicted RBP11.32□□□□□ -0.6
LINC01416-201ENST00000563553 ZNF219Q9P2Y4 722 aaPredicted RBP11.29□□□□□ -0.6
LINC01416-201ENST00000563553 APLP2Q06481 763 aa11.28□□□□□ -0.6
LINC01416-201ENST00000563553 ABCB7O75027 752 aa11.26□□□□□ -0.61
LINC01416-201ENST00000563553 ATF5Q9Y2D1 282 aaPredicted RBP11.25□□□□□ -0.61
LINC01416-201ENST00000563553 POLA2Q14181 598 aa11.09□□□□□ -0.63
LINC01416-201ENST00000563553 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
LINC01416-201ENST00000563553 CSRNP3Q8WYN3 585 aa10.97□□□□□ -0.65
LINC01416-201ENST00000563553 POTEHQ6S545 545 aa10.9□□□□□ -0.67
LINC01416-201ENST00000563553 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
LINC01416-201ENST00000563553 RBM42Q9BTD8 480 aaKnown RBP10.79□□□□□ -0.68
LINC01416-201ENST00000563553 ZBTB12Q9Y330 459 aaPredicted RBP10.79□□□□□ -0.68
LINC01416-201ENST00000563553 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
LINC01416-201ENST00000563553 MKRN4PQ13434 485 aaPredicted RBP10.73□□□□□ -0.69
LINC01416-201ENST00000563553 AKT1S1Q96B36 256 aa10.63□□□□□ -0.71
LINC01416-201ENST00000563553 FBLN2P98095 1184 aa10.58□□□□□ -0.72
LINC01416-201ENST00000563553 CHRDL2Q6WN34 429 aa10.57□□□□□ -0.72
LINC01416-201ENST00000563553 REM2Q8IYK8 340 aaPredicted RBP10.57□□□□□ -0.72
LINC01416-201ENST00000563553 SPDYE2BA6NHP3 402 aa10.53□□□□□ -0.72
LINC01416-201ENST00000563553 SPDYE6P0CI01 402 aa10.53□□□□□ -0.72
LINC01416-201ENST00000563553 SPDYE2Q495Y8 402 aa10.53□□□□□ -0.72
LINC01416-201ENST00000563553 SSUH2Q9Y2M2 353 aa10.49□□□□□ -0.73
LINC01416-201ENST00000563553 PITPNM1O00562 1244 aa10.48□□□□□ -0.73
LINC01416-201ENST00000563553 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
LINC01416-201ENST00000563553 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
LINC01416-201ENST00000563553 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01416-201ENST00000563553 PABPN1Q86U42 306 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC01416-201ENST00000563553 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
LINC01416-201ENST00000563553 CLEC11AQ9Y240 323 aa10.24□□□□□ -0.77
LINC01416-201ENST00000563553 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
LINC01416-201ENST00000563553 PRKAR2AP13861 404 aaKnown RBP10.16□□□□□ -0.78
LINC01416-201ENST00000563553 CHADLQ6NUI6 762 aa10.12□□□□□ -0.79
LINC01416-201ENST00000563553 EVX2Q03828 476 aa10.12□□□□□ -0.79
LINC01416-201ENST00000563553 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
LINC01416-201ENST00000563553 PROM2Q8N271 834 aa10.08□□□□□ -0.8
LINC01416-201ENST00000563553 SP7Q8TDD2 431 aaPredicted RBP10.07□□□□□ -0.8
LINC01416-201ENST00000563553 HAX1O00165 279 aa10.06□□□□□ -0.8
LINC01416-201ENST00000563553 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
LINC01416-201ENST00000563553 CREBZFQ9NS37 354 aa9.99□□□□□ -0.81
LINC01416-201ENST00000563553 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
LINC01416-201ENST00000563553 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
LINC01416-201ENST00000563553 MNX1P50219 401 aaPredicted RBP9.9□□□□□ -0.82
LINC01416-201ENST00000563553 FKBP8Q14318 412 aa9.86□□□□□ -0.83
LINC01416-201ENST00000563553 CD44P16070 742 aaKnown RBP9.84□□□□□ -0.83
LINC01416-201ENST00000563553 GABBR2O75899 941 aa9.81□□□□□ -0.84
LINC01416-201ENST00000563553 ZNF579Q8NAF0 562 aaKnown RBP9.73□□□□□ -0.85
LINC01416-201ENST00000563553 ZRANB1Q9UGI0 708 aa9.71□□□□□ -0.85
LINC01416-201ENST00000563553 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
LINC01416-201ENST00000563553 NPM1P06748 294 aaKnown RBP eCLIP9.66□□□□□ -0.86
LINC01416-201ENST00000563553 PHF12Q96QT6 1004 aa9.65□□□□□ -0.86
LINC01416-201ENST00000563553 MIER1Q8N108 512 aa9.65□□□□□ -0.87
LINC01416-201ENST00000563553 GALR2O43603 387 aaPredicted RBP9.64□□□□□ -0.87
LINC01416-201ENST00000563553 RASEFQ8IZ41 740 aa9.6□□□□□ -0.87
LINC01416-201ENST00000563553 CCDC61Q9Y6R9 512 aa9.6□□□□□ -0.87
LINC01416-201ENST00000563553 CLCN6P51797 869 aa9.59□□□□□ -0.87
LINC01416-201ENST00000563553 PLCD3Q8N3E9 789 aa9.57□□□□□ -0.88
LINC01416-201ENST00000563553 PAK3O75914 559 aaPredicted RBP9.56□□□□□ -0.88
LINC01416-201ENST00000563553 TSPYL2Q9H2G4 693 aaPredicted RBP9.56□□□□□ -0.88
LINC01416-201ENST00000563553 NUBP1P53384 320 aa9.56□□□□□ -0.88
LINC01416-201ENST00000563553 MS4A3Q96HJ5 214 aa9.53□□□□□ -0.88
LINC01416-201ENST00000563553 PLEKHG5O94827 1062 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms