RNA–Protein interactions for RNA: ENST00000563054.1

AC237221.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC237221.1, Length 2,947 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC237221.1-202ENST00000563054 NISCHQ9Y2I1 1504 aa26.8■■□□□ 1.88
AC237221.1-202ENST00000563054 SHROOM4Q9ULL8 1493 aa23■■□□□ 1.27
AC237221.1-202ENST00000563054 DCAF8L2P0C7V8 631 aa22.89■■□□□ 1.25
AC237221.1-202ENST00000563054 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
AC237221.1-202ENST00000563054 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
AC237221.1-202ENST00000563054 SUPT5HO00267 1087 aaKnown RBP22.37■■□□□ 1.17
AC237221.1-202ENST00000563054 ABCC9O60706 1549 aa21.88■■□□□ 1.09
AC237221.1-202ENST00000563054 DCAF1Q9Y4B6 1507 aa21.78■■□□□ 1.08
AC237221.1-202ENST00000563054 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
AC237221.1-202ENST00000563054 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
AC237221.1-202ENST00000563054 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
AC237221.1-202ENST00000563054 NACADO15069 1562 aa21.23■□□□□ 0.99
AC237221.1-202ENST00000563054 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.97
AC237221.1-202ENST00000563054 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
AC237221.1-202ENST00000563054 CECR2Q9BXF3 1484 aa21.1■□□□□ 0.97
AC237221.1-202ENST00000563054 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
AC237221.1-202ENST00000563054 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
AC237221.1-202ENST00000563054 MROH2BQ7Z745 1585 aa20.91■□□□□ 0.94
AC237221.1-202ENST00000563054 LOC105371045A0A1W2PR82 267 aa20.9■□□□□ 0.94
AC237221.1-202ENST00000563054 WIZO95785 1651 aa20.78■□□□□ 0.92
AC237221.1-202ENST00000563054 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.92
AC237221.1-202ENST00000563054 FAM9AQ8IZU1 332 aaPredicted RBP20.77■□□□□ 0.91
AC237221.1-202ENST00000563054 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
AC237221.1-202ENST00000563054 UNC13AQ9UPW8 1703 aa20.72■□□□□ 0.91
AC237221.1-202ENST00000563054 PCGF6Q9BYE7 350 aa20.64■□□□□ 0.9
AC237221.1-202ENST00000563054 MYT1Q01538 1121 aa20.58■□□□□ 0.89
AC237221.1-202ENST00000563054 BAZ1AQ9NRL2 1556 aaPredicted RBP20.57■□□□□ 0.88
AC237221.1-202ENST00000563054 BICRAQ9NZM4 1560 aa20.51■□□□□ 0.87
AC237221.1-202ENST00000563054 SMARCA4P51532 1647 aa20.47■□□□□ 0.87
AC237221.1-202ENST00000563054 HRCP23327 699 aa20.44■□□□□ 0.86
AC237221.1-202ENST00000563054 CCDC88BA6NC98 1476 aa20.35■□□□□ 0.85
AC237221.1-202ENST00000563054 TOP2AP11388 1531 aaKnown RBP20.31■□□□□ 0.84
AC237221.1-202ENST00000563054 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
AC237221.1-202ENST00000563054 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
AC237221.1-202ENST00000563054 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
AC237221.1-202ENST00000563054 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.82
AC237221.1-202ENST00000563054 EIF4G1Q04637 1599 aaKnown RBP20.11■□□□□ 0.81
AC237221.1-202ENST00000563054 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
AC237221.1-202ENST00000563054 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
AC237221.1-202ENST00000563054 SOGA1O94964 1423 aa20■□□□□ 0.79
AC237221.1-202ENST00000563054 RUSC2Q8N2Y8 1516 aa19.96■□□□□ 0.79
AC237221.1-202ENST00000563054 PEG3Q9GZU2 1588 aa19.95■□□□□ 0.78
AC237221.1-202ENST00000563054 TTBK1Q5TCY1 1321 aaPredicted RBP19.94■□□□□ 0.78
AC237221.1-202ENST00000563054 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
AC237221.1-202ENST00000563054 UBTFP17480 764 aaKnown RBP19.88■□□□□ 0.77
AC237221.1-202ENST00000563054 SCAF1Q9H7N4 1312 aaKnown RBP19.86■□□□□ 0.77
AC237221.1-202ENST00000563054 CSRNP3Q8WYN3 585 aa19.84■□□□□ 0.77
AC237221.1-202ENST00000563054 RANGAP1P46060 587 aaPredicted RBP19.83■□□□□ 0.76
AC237221.1-202ENST00000563054 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
AC237221.1-202ENST00000563054 NCAPD3P42695 1498 aa19.72■□□□□ 0.75
AC237221.1-202ENST00000563054 CEP162Q5TB80 1403 aa19.64■□□□□ 0.73
AC237221.1-202ENST00000563054 HMGXB3Q12766 1538 aa19.59■□□□□ 0.73
AC237221.1-202ENST00000563054 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
AC237221.1-202ENST00000563054 EEA1Q15075 1411 aa19.55■□□□□ 0.72
AC237221.1-202ENST00000563054 ZEB1P37275 1124 aaPredicted RBP19.54■□□□□ 0.72
AC237221.1-202ENST00000563054 CC2D2AQ9P2K1 1620 aa19.53■□□□□ 0.72
AC237221.1-202ENST00000563054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
AC237221.1-202ENST00000563054 GOLGA3Q08378 1498 aa19.52■□□□□ 0.72
AC237221.1-202ENST00000563054 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.71
AC237221.1-202ENST00000563054 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
AC237221.1-202ENST00000563054 CFTRP13569 1480 aa19.47■□□□□ 0.71
AC237221.1-202ENST00000563054 CUX1P39880 1505 aa19.46■□□□□ 0.71
AC237221.1-202ENST00000563054 TOP2BQ02880 1626 aa19.46■□□□□ 0.71
AC237221.1-202ENST00000563054 CEP164Q9UPV0 1460 aa19.44■□□□□ 0.7
AC237221.1-202ENST00000563054 CADPSQ9ULU8 1353 aa19.41■□□□□ 0.7
AC237221.1-202ENST00000563054 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
AC237221.1-202ENST00000563054 CLIP1P30622 1438 aa19.38■□□□□ 0.69
AC237221.1-202ENST00000563054 NESP48681 1621 aa19.35■□□□□ 0.69
AC237221.1-202ENST00000563054 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.69
AC237221.1-202ENST00000563054 KIF21BO75037 1637 aa19.31■□□□□ 0.68
AC237221.1-202ENST00000563054 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
AC237221.1-202ENST00000563054 APLP2Q06481 763 aa19.26■□□□□ 0.67
AC237221.1-202ENST00000563054 CUX2O14529 1486 aa19.26■□□□□ 0.67
AC237221.1-202ENST00000563054 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
AC237221.1-202ENST00000563054 PRKCSHP14314 528 aaPredicted RBP19.24■□□□□ 0.67
AC237221.1-202ENST00000563054 FANCD2Q9BXW9 1451 aa19.23■□□□□ 0.67
AC237221.1-202ENST00000563054 FGD5Q6ZNL6 1462 aa19.21■□□□□ 0.67
AC237221.1-202ENST00000563054 PRXQ9BXM0 1461 aa19.21■□□□□ 0.66
AC237221.1-202ENST00000563054 BCL11AQ9H165 835 aa19.2■□□□□ 0.66
AC237221.1-202ENST00000563054 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
AC237221.1-202ENST00000563054 IGF1RP08069 1367 aa19.16■□□□□ 0.66
AC237221.1-202ENST00000563054 P3H3Q8IVL6 736 aa19.16■□□□□ 0.66
AC237221.1-202ENST00000563054 VPS8Q8N3P4 1428 aa19.16■□□□□ 0.66
AC237221.1-202ENST00000563054 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
AC237221.1-202ENST00000563054 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
AC237221.1-202ENST00000563054 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
AC237221.1-202ENST00000563054 ATP1B4Q9UN42 357 aaPredicted RBP19.08■□□□□ 0.64
AC237221.1-202ENST00000563054 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
AC237221.1-202ENST00000563054 ERICH3Q5RHP9 1530 aa19.06■□□□□ 0.64
AC237221.1-202ENST00000563054 ACIN1Q9UKV3 1341 aaKnown RBP19.05■□□□□ 0.64
AC237221.1-202ENST00000563054 TOPBP1Q92547 1522 aa19.03■□□□□ 0.64
AC237221.1-202ENST00000563054 TDRD9Q8NDG6 1382 aaKnown RBP19.03■□□□□ 0.64
AC237221.1-202ENST00000563054 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.64
AC237221.1-202ENST00000563054 ITGAEP38570 1179 aa18.98■□□□□ 0.63
AC237221.1-202ENST00000563054 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
AC237221.1-202ENST00000563054 URB2Q14146 1524 aaKnown RBP18.97■□□□□ 0.63
AC237221.1-202ENST00000563054 NEUROD1Q13562 356 aa18.96■□□□□ 0.63
AC237221.1-202ENST00000563054 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
AC237221.1-202ENST00000563054 DNMBPQ6XZF7 1577 aa18.96■□□□□ 0.63
AC237221.1-202ENST00000563054 DIEXFQ68CQ4 756 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 303.3 ms