RNA–Protein interactions for RNA: ENST00000562974.1

EDC3-205, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 204 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-205ENST00000562974 AEBP2Q6ZN18 517 aaPredicted RBP7.41□□□□□ -1.22
EDC3-205ENST00000562974 CHIC1Q5VXU3 224 aa7.22□□□□□ -1.25
EDC3-205ENST00000562974 PHF23Q9BUL5 403 aaPredicted RBP6.37□□□□□ -1.39
EDC3-205ENST00000562974 SENP3Q9H4L4 574 aaPredicted RBP6.23□□□□□ -1.41
EDC3-205ENST00000562974 FOXD1Q16676 465 aa5.81□□□□□ -1.48
EDC3-205ENST00000562974 PLPPR3Q6T4P5 718 aa5.81□□□□□ -1.48
EDC3-205ENST00000562974 PPP6R1Q9UPN7 881 aa5.6□□□□□ -1.51
EDC3-205ENST00000562974 ADRA2BP18089 450 aa5.53□□□□□ -1.52
EDC3-205ENST00000562974 PIAS4Q8N2W9 510 aaPredicted RBP5.4□□□□□ -1.54
EDC3-205ENST00000562974 MSH5O43196 834 aa5.33□□□□□ -1.56
EDC3-205ENST00000562974 PPP4R3CPQ6ZMV5 832 aa5.12□□□□□ -1.59
EDC3-205ENST00000562974 SCAF1Q9H7N4 1312 aaKnown RBP5.04□□□□□ -1.6
EDC3-205ENST00000562974 MAPK8IP2Q13387 824 aaPredicted RBP5.03□□□□□ -1.6
EDC3-205ENST00000562974 KCNA4P22459 653 aa5.01□□□□□ -1.61
EDC3-205ENST00000562974 DMRT2Q9Y5R5 561 aa5.01□□□□□ -1.61
EDC3-205ENST00000562974 CNKSR2Q8WXI2 1034 aa4.99□□□□□ -1.61
EDC3-205ENST00000562974 DNAJC5BQ9UF47 199 aa4.98□□□□□ -1.61
EDC3-205ENST00000562974 HOXD11P31277 338 aaPredicted RBP4.95□□□□□ -1.62
EDC3-205ENST00000562974 NCBP3Q53F19 620 aaKnown RBP4.94□□□□□ -1.62
EDC3-205ENST00000562974 NPM3O75607 178 aaKnown RBP4.92□□□□□ -1.62
EDC3-205ENST00000562974 RNF216Q9NWF9 866 aaPredicted RBP4.92□□□□□ -1.62
EDC3-205ENST00000562974 POTEDQ86YR6 584 aa4.88□□□□□ -1.63
EDC3-205ENST00000562974 EHMT2Q96KQ7 1210 aa4.79□□□□□ -1.64
EDC3-205ENST00000562974 SLC4A1APQ9BWU0 796 aaKnown RBP4.78□□□□□ -1.64
EDC3-205ENST00000562974 SLC4A2P04920 1241 aa4.69□□□□□ -1.66
EDC3-205ENST00000562974 DCAF8L1A6NGE4 600 aa4.66□□□□□ -1.66
EDC3-205ENST00000562974 ZBTB22O15209 634 aa4.63□□□□□ -1.67
EDC3-205ENST00000562974 CSRNP3Q8WYN3 585 aa4.62□□□□□ -1.67
EDC3-205ENST00000562974 RNF39Q9H2S5 420 aa4.61□□□□□ -1.67
EDC3-205ENST00000562974 FOXD4L1Q9NU39 408 aa4.59□□□□□ -1.67
EDC3-205ENST00000562974 U3KPZ7 1027 aaPredicted RBP4.58□□□□□ -1.68
EDC3-205ENST00000562974 C1QBPQ07021 282 aaKnown RBP4.54□□□□□ -1.68
EDC3-205ENST00000562974 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.54□□□□□ -1.683e-7■■□□□ 13.1
EDC3-205ENST00000562974 MYCNP04198 464 aaPredicted RBP4.53□□□□□ -1.68
EDC3-205ENST00000562974 ATXN8OSP0DMR3 200 aa4.49□□□□□ -1.69
EDC3-205ENST00000562974 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.47□□□□□ -1.69
EDC3-205ENST00000562974 HNRNPUL2Q1KMD3 747 aaKnown RBP4.47□□□□□ -1.69
EDC3-205ENST00000562974 SAMD1Q6SPF0 538 aaPredicted RBP4.46□□□□□ -1.7
EDC3-205ENST00000562974 ATF5Q9Y2D1 282 aaPredicted RBP4.43□□□□□ -1.7
EDC3-205ENST00000562974 SPINK5Q9NQ38 1064 aaPredicted RBP4.41□□□□□ -1.7
EDC3-205ENST00000562974 APLP2Q06481 763 aa4.4□□□□□ -1.71
EDC3-205ENST00000562974 CACNB1Q02641 598 aaPredicted RBP4.38□□□□□ -1.71
EDC3-205ENST00000562974 DSG3P32926 999 aa4.37□□□□□ -1.71
EDC3-205ENST00000562974 ZNF219Q9P2Y4 722 aaPredicted RBP4.37□□□□□ -1.71
EDC3-205ENST00000562974 CAPN15O75808 1086 aa4.32□□□□□ -1.72
EDC3-205ENST00000562974 TRHP20396 242 aaPredicted RBP4.32□□□□□ -1.72
EDC3-205ENST00000562974 POLA2Q14181 598 aa4.28□□□□□ -1.72
EDC3-205ENST00000562974 MKRN4PQ13434 485 aaPredicted RBP4.27□□□□□ -1.73
EDC3-205ENST00000562974 ABCB7O75027 752 aa4.26□□□□□ -1.73
EDC3-205ENST00000562974 FKBP8Q14318 412 aa4.22□□□□□ -1.73
EDC3-205ENST00000562974 ZBTB12Q9Y330 459 aaPredicted RBP4.22□□□□□ -1.73
EDC3-205ENST00000562974 PROM2Q8N271 834 aa4.17□□□□□ -1.74
EDC3-205ENST00000562974 FBLN2P98095 1184 aa4.16□□□□□ -1.74
EDC3-205ENST00000562974 SSUH2Q9Y2M2 353 aa4.16□□□□□ -1.74
EDC3-205ENST00000562974 SPDYE2BA6NHP3 402 aa4.14□□□□□ -1.75
EDC3-205ENST00000562974 SPDYE6P0CI01 402 aa4.14□□□□□ -1.75
EDC3-205ENST00000562974 SPDYE2Q495Y8 402 aa4.14□□□□□ -1.75
EDC3-205ENST00000562974 OSCARQ8IYS5 282 aa4.13□□□□□ -1.75
EDC3-205ENST00000562974 SPDYE4A6NLX3 237 aa4.12□□□□□ -1.75
EDC3-205ENST00000562974 RBM42Q9BTD8 480 aaKnown RBP4.12□□□□□ -1.75
EDC3-205ENST00000562974 AKT1S1Q96B36 256 aa4.09□□□□□ -1.75
EDC3-205ENST00000562974 ZNF692Q9BU19 519 aaPredicted RBP4.05□□□□□ -1.76
EDC3-205ENST00000562974 REM2Q8IYK8 340 aaPredicted RBP4.04□□□□□ -1.76
EDC3-205ENST00000562974 PABPN1Q86U42 306 aaKnown RBP eCLIP4.01□□□□□ -1.77
EDC3-205ENST00000562974 PITPNM1O00562 1244 aa3.99□□□□□ -1.77
EDC3-205ENST00000562974 SPDYE1Q8NFV5 336 aaPredicted RBP3.98□□□□□ -1.77
EDC3-205ENST00000562974 FBXO3Q9UK99 471 aa3.98□□□□□ -1.77
EDC3-205ENST00000562974 FXR2P51116 673 aaKnown RBP eCLIP3.97□□□□□ -1.77
EDC3-205ENST00000562974 STAG3Q9UJ98 1225 aa3.97□□□□□ -1.77
EDC3-205ENST00000562974 VASPP50552 380 aaPredicted RBP3.96□□□□□ -1.78
EDC3-205ENST00000562974 RTN4Q9NQC3 1192 aaKnown RBP3.96□□□□□ -1.78
EDC3-205ENST00000562974 CHRDL2Q6WN34 429 aa3.95□□□□□ -1.78
EDC3-205ENST00000562974 MNX1P50219 401 aaPredicted RBP3.94□□□□□ -1.78
EDC3-205ENST00000562974 CLEC11AQ9Y240 323 aa3.94□□□□□ -1.78
EDC3-205ENST00000562974 KLHL34Q8N239 644 aa3.92□□□□□ -1.78
EDC3-205ENST00000562974 PLCD3Q8N3E9 789 aa3.92□□□□□ -1.78
EDC3-205ENST00000562974 PIP4P2Q8N4L2 257 aa3.92□□□□□ -1.78
EDC3-205ENST00000562974 CREBZFQ9NS37 354 aa3.92□□□□□ -1.78
EDC3-205ENST00000562974 AMER1Q5JTC6 1135 aaPredicted RBP3.91□□□□□ -1.78
EDC3-205ENST00000562974 IFNLR1Q8IU57 520 aaPredicted RBP3.91□□□□□ -1.78
EDC3-205ENST00000562974 MIER1Q8N108 512 aa3.91□□□□□ -1.78
EDC3-205ENST00000562974 PRR29P0C7W0 189 aa3.89□□□□□ -1.79
EDC3-205ENST00000562974 PLEKHG5O94827 1062 aa3.86□□□□□ -1.79
EDC3-205ENST00000562974 DCAF8L2P0C7V8 631 aa3.85□□□□□ -1.79
EDC3-205ENST00000562974 PRKAR2AP13861 404 aaKnown RBP3.85□□□□□ -1.79
EDC3-205ENST00000562974 SPOCK2Q92563 424 aa3.85□□□□□ -1.79
EDC3-205ENST00000562974 FARP1Q9Y4F1 1045 aaPredicted RBP3.85□□□□□ -1.79
EDC3-205ENST00000562974 NUBP1P53384 320 aa3.84□□□□□ -1.79
EDC3-205ENST00000562974 CHADLQ6NUI6 762 aa3.84□□□□□ -1.79
EDC3-205ENST00000562974 POTEHQ6S545 545 aa3.84□□□□□ -1.79
EDC3-205ENST00000562974 C19orf67A6NJJ6 358 aa3.83□□□□□ -1.8
EDC3-205ENST00000562974 CIZ1Q9ULV3 898 aaPredicted RBP3.83□□□□□ -1.8
EDC3-205ENST00000562974 ZBTB47Q9UFB7 747 aaPredicted RBP3.81□□□□□ -1.8
EDC3-205ENST00000562974 PKD2Q13563 968 aa3.8□□□□□ -1.8
EDC3-205ENST00000562974 ECM2O94769 699 aaPredicted RBP3.79□□□□□ -1.8
EDC3-205ENST00000562974 DCAF8Q5TAQ9 597 aa3.79□□□□□ -1.8
EDC3-205ENST00000562974 NPM1P06748 294 aaKnown RBP eCLIP3.78□□□□□ -1.8
EDC3-205ENST00000562974 EVX2Q03828 476 aa3.78□□□□□ -1.8
EDC3-205ENST00000562974 RASEFQ8IZ41 740 aa3.78□□□□□ -1.8
EDC3-205ENST00000562974 CCDC61Q9Y6R9 512 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms