RNA–Protein interactions for RNA: ENST00000562904.1

AL513548.1-201, humanhuman

BASIC

Gene AL513548.1, Length 1,724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL513548.1-201ENST00000562904 AEBP2Q6ZN18 517 aaPredicted RBP28.23■■■□□ 2.11
AL513548.1-201ENST00000562904 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
AL513548.1-201ENST00000562904 PHF23Q9BUL5 403 aaPredicted RBP24.39■■□□□ 1.5
AL513548.1-201ENST00000562904 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
AL513548.1-201ENST00000562904 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
AL513548.1-201ENST00000562904 FOXD1Q16676 465 aa22.16■■□□□ 1.14
AL513548.1-201ENST00000562904 PPP6R1Q9UPN7 881 aa21.48■■□□□ 1.03
AL513548.1-201ENST00000562904 ADRA2BP18089 450 aa21.41■■□□□ 1.02
AL513548.1-201ENST00000562904 PIAS4Q8N2W9 510 aaPredicted RBP20.84■□□□□ 0.93
AL513548.1-201ENST00000562904 MSH5O43196 834 aa20.28■□□□□ 0.84
AL513548.1-201ENST00000562904 PPP4R3CPQ6ZMV5 832 aa19.82■□□□□ 0.76
AL513548.1-201ENST00000562904 KCNA4P22459 653 aa19.54■□□□□ 0.72
AL513548.1-201ENST00000562904 SCAF1Q9H7N4 1312 aaKnown RBP19.45■□□□□ 0.7
AL513548.1-201ENST00000562904 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
AL513548.1-201ENST00000562904 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
AL513548.1-201ENST00000562904 CNKSR2Q8WXI2 1034 aa19.21■□□□□ 0.67
AL513548.1-201ENST00000562904 NPM3O75607 178 aaKnown RBP19.08■□□□□ 0.64
AL513548.1-201ENST00000562904 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
AL513548.1-201ENST00000562904 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
AL513548.1-201ENST00000562904 HOXD11P31277 338 aaPredicted RBP18.74■□□□□ 0.59
AL513548.1-201ENST00000562904 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
AL513548.1-201ENST00000562904 SLC4A1APQ9BWU0 796 aaKnown RBP18.55■□□□□ 0.56
AL513548.1-201ENST00000562904 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
AL513548.1-201ENST00000562904 EHMT2Q96KQ7 1210 aa18.16■□□□□ 0.5
AL513548.1-201ENST00000562904 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
AL513548.1-201ENST00000562904 ZBTB22O15209 634 aa18.03■□□□□ 0.48
AL513548.1-201ENST00000562904 SLC4A2P04920 1241 aa18.03■□□□□ 0.48
AL513548.1-201ENST00000562904 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
AL513548.1-201ENST00000562904 FOXD4L1Q9NU39 408 aa17.89■□□□□ 0.45
AL513548.1-201ENST00000562904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
AL513548.1-201ENST00000562904 U3KPZ7 1027 aaPredicted RBP17.58■□□□□ 0.41
AL513548.1-201ENST00000562904 MYCNP04198 464 aaPredicted RBP17.55■□□□□ 0.4
AL513548.1-201ENST00000562904 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
AL513548.1-201ENST00000562904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
AL513548.1-201ENST00000562904 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
AL513548.1-201ENST00000562904 ATXN8OSP0DMR3 200 aa17.25■□□□□ 0.35
AL513548.1-201ENST00000562904 SAMD1Q6SPF0 538 aaPredicted RBP17.25■□□□□ 0.35
AL513548.1-201ENST00000562904 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
AL513548.1-201ENST00000562904 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
AL513548.1-201ENST00000562904 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
AL513548.1-201ENST00000562904 APLP2Q06481 763 aa17.01■□□□□ 0.31
AL513548.1-201ENST00000562904 CAPN15O75808 1086 aa16.88■□□□□ 0.29
AL513548.1-201ENST00000562904 TRHP20396 242 aaPredicted RBP16.85■□□□□ 0.29
AL513548.1-201ENST00000562904 ZNF219Q9P2Y4 722 aaPredicted RBP16.84■□□□□ 0.29
AL513548.1-201ENST00000562904 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
AL513548.1-201ENST00000562904 DSG3P32926 999 aa16.67■□□□□ 0.26
AL513548.1-201ENST00000562904 POLA2Q14181 598 aa16.65■□□□□ 0.26
AL513548.1-201ENST00000562904 ABCB7O75027 752 aa16.62■□□□□ 0.25
AL513548.1-201ENST00000562904 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
AL513548.1-201ENST00000562904 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
AL513548.1-201ENST00000562904 FBLN2P98095 1184 aa16.28■□□□□ 0.2
AL513548.1-201ENST00000562904 FKBP8Q14318 412 aa16.18■□□□□ 0.18
AL513548.1-201ENST00000562904 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
AL513548.1-201ENST00000562904 SPDYE4A6NLX3 237 aa16.04■□□□□ 0.16
AL513548.1-201ENST00000562904 SPDYE2BA6NHP3 402 aa15.93■□□□□ 0.14
AL513548.1-201ENST00000562904 SPDYE6P0CI01 402 aa15.93■□□□□ 0.14
AL513548.1-201ENST00000562904 SPDYE2Q495Y8 402 aa15.93■□□□□ 0.14
AL513548.1-201ENST00000562904 PROM2Q8N271 834 aa15.89■□□□□ 0.13
AL513548.1-201ENST00000562904 ZNF692Q9BU19 519 aaPredicted RBP15.88■□□□□ 0.13
AL513548.1-201ENST00000562904 SSUH2Q9Y2M2 353 aa15.88■□□□□ 0.13
AL513548.1-201ENST00000562904 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.11
AL513548.1-201ENST00000562904 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
AL513548.1-201ENST00000562904 AKT1S1Q96B36 256 aa15.65■□□□□ 0.1
AL513548.1-201ENST00000562904 REM2Q8IYK8 340 aaPredicted RBP15.54■□□□□ 0.08
AL513548.1-201ENST00000562904 FBXO3Q9UK99 471 aa15.51■□□□□ 0.07
AL513548.1-201ENST00000562904 SPDYE1Q8NFV5 336 aaPredicted RBP15.4■□□□□ 0.06
AL513548.1-201ENST00000562904 STAG3Q9UJ98 1225 aa15.4■□□□□ 0.06
AL513548.1-201ENST00000562904 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
AL513548.1-201ENST00000562904 PITPNM1O00562 1244 aa15.35■□□□□ 0.05
AL513548.1-201ENST00000562904 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
AL513548.1-201ENST00000562904 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
AL513548.1-201ENST00000562904 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
AL513548.1-201ENST00000562904 MIER1Q8N108 512 aa15.16■□□□□ 0.02
AL513548.1-201ENST00000562904 PLCD3Q8N3E9 789 aa15.13■□□□□ 0.01
AL513548.1-201ENST00000562904 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
AL513548.1-201ENST00000562904 CHRDL2Q6WN34 429 aa15.12■□□□□ 0.01
AL513548.1-201ENST00000562904 FXR2P51116 673 aaKnown RBP eCLIP15.07■□□□□ 0
AL513548.1-201ENST00000562904 MNX1P50219 401 aaPredicted RBP15.03■□□□□ -0
AL513548.1-201ENST00000562904 CHADLQ6NUI6 762 aa15□□□□□ -0.01
AL513548.1-201ENST00000562904 KLHL34Q8N239 644 aa14.99□□□□□ -0.01
AL513548.1-201ENST00000562904 PIP4P2Q8N4L2 257 aa14.99□□□□□ -0.01
AL513548.1-201ENST00000562904 RTN4Q9NQC3 1192 aaKnown RBP14.98□□□□□ -0.01
AL513548.1-201ENST00000562904 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
AL513548.1-201ENST00000562904 PRKAR2AP13861 404 aaKnown RBP14.95□□□□□ -0.02
AL513548.1-201ENST00000562904 SPOCK2Q92563 424 aa14.94□□□□□ -0.02
AL513548.1-201ENST00000562904 AMER1Q5JTC6 1135 aaPredicted RBP14.93□□□□□ -0.02
AL513548.1-201ENST00000562904 ZBTB47Q9UFB7 747 aaPredicted RBP14.92□□□□□ -0.02
AL513548.1-201ENST00000562904 NUBP1P53384 320 aa14.86□□□□□ -0.03
AL513548.1-201ENST00000562904 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
AL513548.1-201ENST00000562904 PKD2Q13563 968 aa14.78□□□□□ -0.04
AL513548.1-201ENST00000562904 NPM1P06748 294 aaKnown RBP eCLIP14.77□□□□□ -0.05
AL513548.1-201ENST00000562904 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
AL513548.1-201ENST00000562904 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
AL513548.1-201ENST00000562904 DCAF8Q5TAQ9 597 aa14.63□□□□□ -0.07
AL513548.1-201ENST00000562904 GSE1Q14687 1217 aa14.63□□□□□ -0.07
AL513548.1-201ENST00000562904 POTEHQ6S545 545 aa14.62□□□□□ -0.07
AL513548.1-201ENST00000562904 FAM212AQ96EL1 285 aa14.61□□□□□ -0.07
AL513548.1-201ENST00000562904 TSPYL2Q9H2G4 693 aaPredicted RBP14.58□□□□□ -0.08
AL513548.1-201ENST00000562904 ECM2O94769 699 aaPredicted RBP14.55□□□□□ -0.08
AL513548.1-201ENST00000562904 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms