RNA–Protein interactions for RNA: ENST00000561519.5

LINC02170-201, humanhuman

TSL 4 BASIC

Gene LINC02170, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02170-201ENST00000561519 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
LINC02170-201ENST00000561519 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
LINC02170-201ENST00000561519 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
LINC02170-201ENST00000561519 PHF23Q9BUL5 403 aaPredicted RBP21.16■□□□□ 0.98
LINC02170-201ENST00000561519 FOXD1Q16676 465 aa19.65■□□□□ 0.74
LINC02170-201ENST00000561519 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
LINC02170-201ENST00000561519 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
LINC02170-201ENST00000561519 ADRA2BP18089 450 aa18.67■□□□□ 0.58
LINC02170-201ENST00000561519 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
LINC02170-201ENST00000561519 MSH5O43196 834 aa18.27■□□□□ 0.52
LINC02170-201ENST00000561519 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
LINC02170-201ENST00000561519 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
LINC02170-201ENST00000561519 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
LINC02170-201ENST00000561519 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
LINC02170-201ENST00000561519 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
LINC02170-201ENST00000561519 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
LINC02170-201ENST00000561519 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
LINC02170-201ENST00000561519 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
LINC02170-201ENST00000561519 RNF216Q9NWF9 866 aaPredicted RBP16.47■□□□□ 0.23
LINC02170-201ENST00000561519 KCNA4P22459 653 aa16.46■□□□□ 0.23
LINC02170-201ENST00000561519 NPM3O75607 178 aaKnown RBP16.37■□□□□ 0.21
LINC02170-201ENST00000561519 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
LINC02170-201ENST00000561519 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
LINC02170-201ENST00000561519 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
LINC02170-201ENST00000561519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
LINC02170-201ENST00000561519 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
LINC02170-201ENST00000561519 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
LINC02170-201ENST00000561519 C1QBPQ07021 282 aaKnown RBP15.44■□□□□ 0.06
LINC02170-201ENST00000561519 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
LINC02170-201ENST00000561519 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
LINC02170-201ENST00000561519 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
LINC02170-201ENST00000561519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
LINC02170-201ENST00000561519 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
LINC02170-201ENST00000561519 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
LINC02170-201ENST00000561519 ZBTB22O15209 634 aa15.12■□□□□ 0.01
LINC02170-201ENST00000561519 SAMD1Q6SPF0 538 aaPredicted RBP15.08■□□□□ 0
LINC02170-201ENST00000561519 APLP2Q06481 763 aa15.07■□□□□ 0
LINC02170-201ENST00000561519 EHMT2Q96KQ7 1210 aa15.03■□□□□ -0
LINC02170-201ENST00000561519 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
LINC02170-201ENST00000561519 CAPN15O75808 1086 aa14.92□□□□□ -0.02
LINC02170-201ENST00000561519 CSRNP3Q8WYN3 585 aa14.88□□□□□ -0.03
LINC02170-201ENST00000561519 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
LINC02170-201ENST00000561519 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
LINC02170-201ENST00000561519 TRHP20396 242 aaPredicted RBP14.78□□□□□ -0.04
LINC02170-201ENST00000561519 DSG3P32926 999 aa14.76□□□□□ -0.05
LINC02170-201ENST00000561519 ATF5Q9Y2D1 282 aaPredicted RBP14.7□□□□□ -0.06
LINC02170-201ENST00000561519 ABCB7O75027 752 aa14.58□□□□□ -0.08
LINC02170-201ENST00000561519 POLA2Q14181 598 aa14.52□□□□□ -0.09
LINC02170-201ENST00000561519 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
LINC02170-201ENST00000561519 FBLN2P98095 1184 aa14.16□□□□□ -0.14
LINC02170-201ENST00000561519 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
LINC02170-201ENST00000561519 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
LINC02170-201ENST00000561519 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
LINC02170-201ENST00000561519 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
LINC02170-201ENST00000561519 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
LINC02170-201ENST00000561519 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
LINC02170-201ENST00000561519 AKT1S1Q96B36 256 aa13.89□□□□□ -0.19
LINC02170-201ENST00000561519 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
LINC02170-201ENST00000561519 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
LINC02170-201ENST00000561519 REM2Q8IYK8 340 aaPredicted RBP13.72□□□□□ -0.21
LINC02170-201ENST00000561519 SPDYE4A6NLX3 237 aa13.67□□□□□ -0.22
LINC02170-201ENST00000561519 PABPN1Q86U42 306 aaKnown RBP eCLIP13.59□□□□□ -0.23
LINC02170-201ENST00000561519 CHRDL2Q6WN34 429 aa13.57□□□□□ -0.24
LINC02170-201ENST00000561519 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
LINC02170-201ENST00000561519 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
LINC02170-201ENST00000561519 PROM2Q8N271 834 aa13.48□□□□□ -0.25
LINC02170-201ENST00000561519 FKBP8Q14318 412 aa13.45□□□□□ -0.26
LINC02170-201ENST00000561519 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
LINC02170-201ENST00000561519 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
LINC02170-201ENST00000561519 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
LINC02170-201ENST00000561519 POTEHQ6S545 545 aa13.38□□□□□ -0.27
LINC02170-201ENST00000561519 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
LINC02170-201ENST00000561519 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
LINC02170-201ENST00000561519 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
LINC02170-201ENST00000561519 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
LINC02170-201ENST00000561519 FBXO3Q9UK99 471 aa13.11□□□□□ -0.31
LINC02170-201ENST00000561519 CHADLQ6NUI6 762 aa13.1□□□□□ -0.31
LINC02170-201ENST00000561519 FARP1Q9Y4F1 1045 aaPredicted RBP13.03□□□□□ -0.32
LINC02170-201ENST00000561519 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
LINC02170-201ENST00000561519 MIER1Q8N108 512 aa12.97□□□□□ -0.33
LINC02170-201ENST00000561519 HAX1O00165 279 aa12.95□□□□□ -0.34
LINC02170-201ENST00000561519 MNX1P50219 401 aaPredicted RBP12.95□□□□□ -0.34
LINC02170-201ENST00000561519 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
LINC02170-201ENST00000561519 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
LINC02170-201ENST00000561519 NPM1P06748 294 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC02170-201ENST00000561519 VASPP50552 380 aaPredicted RBP12.89□□□□□ -0.35
LINC02170-201ENST00000561519 ZBTB47Q9UFB7 747 aaPredicted RBP12.88□□□□□ -0.35
LINC02170-201ENST00000561519 CD44P16070 742 aaKnown RBP12.81□□□□□ -0.36
LINC02170-201ENST00000561519 EVX2Q03828 476 aa12.81□□□□□ -0.36
LINC02170-201ENST00000561519 SP7Q8TDD2 431 aaPredicted RBP12.78□□□□□ -0.36
LINC02170-201ENST00000561519 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
LINC02170-201ENST00000561519 NUBP1P53384 320 aa12.7□□□□□ -0.38
LINC02170-201ENST00000561519 ZRANB1Q9UGI0 708 aa12.7□□□□□ -0.38
LINC02170-201ENST00000561519 CLCN6P51797 869 aa12.69□□□□□ -0.38
LINC02170-201ENST00000561519 IFNLR1Q8IU57 520 aaPredicted RBP12.68□□□□□ -0.38
LINC02170-201ENST00000561519 KLHL34Q8N239 644 aa12.68□□□□□ -0.38
LINC02170-201ENST00000561519 ZNF579Q8NAF0 562 aaKnown RBP12.68□□□□□ -0.38
LINC02170-201ENST00000561519 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
LINC02170-201ENST00000561519 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
LINC02170-201ENST00000561519 SPOCK2Q92563 424 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms