RNA–Protein interactions for RNA: ENST00000561312.5

MESD-206, Transcript of mesoderm development LRP chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MESD, Length 2,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MESD-206ENST00000561312 NISCHQ9Y2I1 1504 aa26.93■■□□□ 1.9
MESD-206ENST00000561312 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
MESD-206ENST00000561312 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
MESD-206ENST00000561312 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
MESD-206ENST00000561312 ZCCHC6Q5VYS8 1495 aaKnown RBP22.63■■□□□ 1.21
MESD-206ENST00000561312 SUPT5HO00267 1087 aaKnown RBP22.3■■□□□ 1.16
MESD-206ENST00000561312 ABCC9O60706 1549 aa22■■□□□ 1.11
MESD-206ENST00000561312 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
MESD-206ENST00000561312 SCRIBQ14160 1630 aa21.65■■□□□ 1.06
MESD-206ENST00000561312 MYO15BQ96JP2 1530 aa21.48■■□□□ 1.03
MESD-206ENST00000561312 NACADO15069 1562 aa21.43■■□□□ 1.02
MESD-206ENST00000561312 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
MESD-206ENST00000561312 RB1CC1Q8TDY2 1594 aa21.21■□□□□ 0.99
MESD-206ENST00000561312 RSF1Q96T23 1441 aaPredicted RBP21.2■□□□□ 0.98
MESD-206ENST00000561312 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
MESD-206ENST00000561312 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.972e-7■■■□□ 18
MESD-206ENST00000561312 MROH2BQ7Z745 1585 aa20.97■□□□□ 0.95
MESD-206ENST00000561312 WIZO95785 1651 aa20.81■□□□□ 0.92
MESD-206ENST00000561312 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
MESD-206ENST00000561312 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
MESD-206ENST00000561312 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
MESD-206ENST00000561312 BAZ1AQ9NRL2 1556 aaPredicted RBP20.69■□□□□ 0.9
MESD-206ENST00000561312 FAM9AQ8IZU1 332 aaPredicted RBP20.67■□□□□ 0.9
MESD-206ENST00000561312 BICRAQ9NZM4 1560 aa20.65■□□□□ 0.9
MESD-206ENST00000561312 EHMT2Q96KQ7 1210 aa20.62■□□□□ 0.89
MESD-206ENST00000561312 SMARCA4P51532 1647 aa20.57■□□□□ 0.88
MESD-206ENST00000561312 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
MESD-206ENST00000561312 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
MESD-206ENST00000561312 SMARCA2P51531 1590 aa20.3■□□□□ 0.84
MESD-206ENST00000561312 PCGF6Q9BYE7 350 aa20.27■□□□□ 0.84
MESD-206ENST00000561312 ATAD2BQ9ULI0 1458 aa20.24■□□□□ 0.83
MESD-206ENST00000561312 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
MESD-206ENST00000561312 BAZ1BQ9UIG0 1483 aaKnown RBP20.17■□□□□ 0.82
MESD-206ENST00000561312 EIF4G1Q04637 1599 aaKnown RBP20.13■□□□□ 0.81
MESD-206ENST00000561312 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
MESD-206ENST00000561312 SOGA1O94964 1423 aa20■□□□□ 0.79
MESD-206ENST00000561312 PPARGC1BQ86YN6 1023 aaKnown RBP19.99■□□□□ 0.79
MESD-206ENST00000561312 WRNQ14191 1432 aaPredicted RBP eCLIP19.94■□□□□ 0.78
MESD-206ENST00000561312 RUSC2Q8N2Y8 1516 aa19.93■□□□□ 0.78
MESD-206ENST00000561312 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
MESD-206ENST00000561312 CSRNP3Q8WYN3 585 aa19.89■□□□□ 0.77
MESD-206ENST00000561312 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
MESD-206ENST00000561312 TRIM26Q12899 539 aaPredicted RBP19.87■□□□□ 0.77
MESD-206ENST00000561312 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
MESD-206ENST00000561312 HRCP23327 699 aa19.78■□□□□ 0.76
MESD-206ENST00000561312 TTBK1Q5TCY1 1321 aaPredicted RBP19.78■□□□□ 0.76
MESD-206ENST00000561312 HMGXB3Q12766 1538 aa19.75■□□□□ 0.75
MESD-206ENST00000561312 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
MESD-206ENST00000561312 CC2D2AQ9P2K1 1620 aa19.68■□□□□ 0.74
MESD-206ENST00000561312 EEA1Q15075 1411 aa19.64■□□□□ 0.73
MESD-206ENST00000561312 CEP162Q5TB80 1403 aa19.62■□□□□ 0.73
MESD-206ENST00000561312 CFTRP13569 1480 aa19.61■□□□□ 0.73
MESD-206ENST00000561312 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
MESD-206ENST00000561312 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
MESD-206ENST00000561312 CADPSQ9ULU8 1353 aa19.56■□□□□ 0.72
MESD-206ENST00000561312 GOLGA3Q08378 1498 aa19.54■□□□□ 0.72
MESD-206ENST00000561312 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
MESD-206ENST00000561312 CUX1P39880 1505 aa19.53■□□□□ 0.72
MESD-206ENST00000561312 RAPGEF2Q9Y4G8 1499 aa19.49■□□□□ 0.71
MESD-206ENST00000561312 CEP164Q9UPV0 1460 aa19.48■□□□□ 0.71
MESD-206ENST00000561312 NESP48681 1621 aa19.44■□□□□ 0.7
MESD-206ENST00000561312 BIVM-ERCC5R4GMW8 1640 aa19.41■□□□□ 0.7
MESD-206ENST00000561312 CLIP1P30622 1438 aa19.38■□□□□ 0.69
MESD-206ENST00000561312 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
MESD-206ENST00000561312 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
MESD-206ENST00000561312 KIF21BO75037 1637 aa19.34■□□□□ 0.69
MESD-206ENST00000561312 CUX2O14529 1486 aa19.32■□□□□ 0.68
MESD-206ENST00000561312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
MESD-206ENST00000561312 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
MESD-206ENST00000561312 APLP2Q06481 763 aa19.28■□□□□ 0.68
MESD-206ENST00000561312 PRXQ9BXM0 1461 aa19.27■□□□□ 0.68
MESD-206ENST00000561312 IGF1RP08069 1367 aa19.26■□□□□ 0.67
MESD-206ENST00000561312 RAD54L2Q9Y4B4 1467 aa19.23■□□□□ 0.67
MESD-206ENST00000561312 PRDM2Q13029 1718 aa19.2■□□□□ 0.66
MESD-206ENST00000561312 CCER1Q8TC90 406 aaPredicted RBP19.19■□□□□ 0.66
MESD-206ENST00000561312 CARMIL1Q5VZK9 1371 aa19.18■□□□□ 0.66
MESD-206ENST00000561312 VPS8Q8N3P4 1428 aa19.17■□□□□ 0.66
MESD-206ENST00000561312 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
MESD-206ENST00000561312 P3H3Q8IVL6 736 aa19.15■□□□□ 0.66
MESD-206ENST00000561312 ZEB1P37275 1124 aaPredicted RBP19.14■□□□□ 0.66
MESD-206ENST00000561312 TOPBP1Q92547 1522 aa19.14■□□□□ 0.65
MESD-206ENST00000561312 ERICH3Q5RHP9 1530 aa19.13■□□□□ 0.65
MESD-206ENST00000561312 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
MESD-206ENST00000561312 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
MESD-206ENST00000561312 KANK4Q5T7N3 995 aaPredicted RBP19.09■□□□□ 0.65
MESD-206ENST00000561312 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.64
MESD-206ENST00000561312 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
MESD-206ENST00000561312 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
MESD-206ENST00000561312 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
MESD-206ENST00000561312 ARAP1Q96P48 1450 aa19.07■□□□□ 0.64
MESD-206ENST00000561312 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
MESD-206ENST00000561312 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
MESD-206ENST00000561312 ABCA10Q8WWZ4 1543 aa18.98■□□□□ 0.63
MESD-206ENST00000561312 KIF21AQ7Z4S6 1674 aa18.93■□□□□ 0.62
MESD-206ENST00000561312 ITGAEP38570 1179 aa18.91■□□□□ 0.62
MESD-206ENST00000561312 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
MESD-206ENST00000561312 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.61
MESD-206ENST00000561312 FHOD3Q2V2M9 1422 aa18.83■□□□□ 0.61
MESD-206ENST00000561312 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
MESD-206ENST00000561312 ERCC6Q03468 1493 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms