RNA–Protein interactions for RNA: ENST00000561248.1

COPS2-208, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-208ENST00000561248 AEBP2Q6ZN18 517 aaPredicted RBP25.4■■□□□ 1.66
COPS2-208ENST00000561248 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
COPS2-208ENST00000561248 PHF23Q9BUL5 403 aaPredicted RBP21.86■■□□□ 1.09
COPS2-208ENST00000561248 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
COPS2-208ENST00000561248 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
COPS2-208ENST00000561248 FOXD1Q16676 465 aa20.01■□□□□ 0.79
COPS2-208ENST00000561248 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
COPS2-208ENST00000561248 ADRA2BP18089 450 aa19.25■□□□□ 0.67
COPS2-208ENST00000561248 PIAS4Q8N2W9 510 aaPredicted RBP18.9■□□□□ 0.62
COPS2-208ENST00000561248 MSH5O43196 834 aa18.49■□□□□ 0.55
COPS2-208ENST00000561248 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
COPS2-208ENST00000561248 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
COPS2-208ENST00000561248 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
COPS2-208ENST00000561248 KCNA4P22459 653 aa17.43■□□□□ 0.38
COPS2-208ENST00000561248 NCBP3Q53F19 620 aaKnown RBP17.4■□□□□ 0.38
COPS2-208ENST00000561248 CNKSR2Q8WXI2 1034 aa17.34■□□□□ 0.37
COPS2-208ENST00000561248 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
COPS2-208ENST00000561248 NPM3O75607 178 aaKnown RBP17.11■□□□□ 0.33
COPS2-208ENST00000561248 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
COPS2-208ENST00000561248 HOXD11P31277 338 aaPredicted RBP16.91■□□□□ 0.3
COPS2-208ENST00000561248 POTEDQ86YR6 584 aa16.72■□□□□ 0.27
COPS2-208ENST00000561248 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
COPS2-208ENST00000561248 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
COPS2-208ENST00000561248 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
COPS2-208ENST00000561248 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
COPS2-208ENST00000561248 SLC4A2P04920 1241 aa16.13■□□□□ 0.17
COPS2-208ENST00000561248 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.11■□□□□ 0.176e-6■□□□□ 8.3
COPS2-208ENST00000561248 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
COPS2-208ENST00000561248 ZBTB22O15209 634 aa16.04■□□□□ 0.16
COPS2-208ENST00000561248 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
COPS2-208ENST00000561248 MYCNP04198 464 aaPredicted RBP15.84■□□□□ 0.13
COPS2-208ENST00000561248 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
COPS2-208ENST00000561248 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
COPS2-208ENST00000561248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
COPS2-208ENST00000561248 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
COPS2-208ENST00000561248 C1QBPQ07021 282 aaKnown RBP15.66■□□□□ 0.1
COPS2-208ENST00000561248 SAMD1Q6SPF0 538 aaPredicted RBP15.64■□□□□ 0.09
COPS2-208ENST00000561248 APLP2Q06481 763 aa15.55■□□□□ 0.08
COPS2-208ENST00000561248 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
COPS2-208ENST00000561248 CACNB1Q02641 598 aaPredicted RBP15.37■□□□□ 0.05
COPS2-208ENST00000561248 SPINK5Q9NQ38 1064 aaPredicted RBP15.36■□□□□ 0.05
COPS2-208ENST00000561248 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
COPS2-208ENST00000561248 CAPN15O75808 1086 aa15.32■□□□□ 0.04
COPS2-208ENST00000561248 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
COPS2-208ENST00000561248 TRHP20396 242 aaPredicted RBP15.25■□□□□ 0.03
COPS2-208ENST00000561248 DSG3P32926 999 aa15.06■□□□□ 0
COPS2-208ENST00000561248 ABCB7O75027 752 aa15.02■□□□□ -0
COPS2-208ENST00000561248 POLA2Q14181 598 aa15.02■□□□□ -0
COPS2-208ENST00000561248 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
COPS2-208ENST00000561248 FBLN2P98095 1184 aa14.76□□□□□ -0.05
COPS2-208ENST00000561248 MKRN4PQ13434 485 aaPredicted RBP14.7□□□□□ -0.06
COPS2-208ENST00000561248 OSCARQ8IYS5 282 aa14.51□□□□□ -0.09
COPS2-208ENST00000561248 FKBP8Q14318 412 aa14.45□□□□□ -0.1
COPS2-208ENST00000561248 SPDYE4A6NLX3 237 aa14.42□□□□□ -0.1
COPS2-208ENST00000561248 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
COPS2-208ENST00000561248 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
COPS2-208ENST00000561248 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
COPS2-208ENST00000561248 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
COPS2-208ENST00000561248 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
COPS2-208ENST00000561248 SSUH2Q9Y2M2 353 aa14.3□□□□□ -0.12
COPS2-208ENST00000561248 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
COPS2-208ENST00000561248 PROM2Q8N271 834 aa14.19□□□□□ -0.14
COPS2-208ENST00000561248 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
COPS2-208ENST00000561248 REM2Q8IYK8 340 aaPredicted RBP14.05□□□□□ -0.16
COPS2-208ENST00000561248 FBXO3Q9UK99 471 aa13.98□□□□□ -0.17
COPS2-208ENST00000561248 SPDYE1Q8NFV5 336 aaPredicted RBP13.97□□□□□ -0.17
COPS2-208ENST00000561248 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.17
COPS2-208ENST00000561248 PITPNM1O00562 1244 aa13.89□□□□□ -0.19
COPS2-208ENST00000561248 CLEC11AQ9Y240 323 aa13.88□□□□□ -0.19
COPS2-208ENST00000561248 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
COPS2-208ENST00000561248 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
COPS2-208ENST00000561248 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
COPS2-208ENST00000561248 MIER1Q8N108 512 aa13.67□□□□□ -0.22
COPS2-208ENST00000561248 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
COPS2-208ENST00000561248 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
COPS2-208ENST00000561248 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
COPS2-208ENST00000561248 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
COPS2-208ENST00000561248 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
COPS2-208ENST00000561248 IFNLR1Q8IU57 520 aaPredicted RBP13.55□□□□□ -0.24
COPS2-208ENST00000561248 ZBTB47Q9UFB7 747 aaPredicted RBP13.55□□□□□ -0.24
COPS2-208ENST00000561248 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
COPS2-208ENST00000561248 CHADLQ6NUI6 762 aa13.52□□□□□ -0.25
COPS2-208ENST00000561248 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
COPS2-208ENST00000561248 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
COPS2-208ENST00000561248 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
COPS2-208ENST00000561248 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
COPS2-208ENST00000561248 SPOCK2Q92563 424 aa13.41□□□□□ -0.26
COPS2-208ENST00000561248 NUBP1P53384 320 aa13.3□□□□□ -0.28
COPS2-208ENST00000561248 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
COPS2-208ENST00000561248 POTEHQ6S545 545 aa13.27□□□□□ -0.29
COPS2-208ENST00000561248 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
COPS2-208ENST00000561248 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
COPS2-208ENST00000561248 GSE1Q14687 1217 aa13.21□□□□□ -0.29
COPS2-208ENST00000561248 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
COPS2-208ENST00000561248 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
COPS2-208ENST00000561248 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
COPS2-208ENST00000561248 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
COPS2-208ENST00000561248 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
COPS2-208ENST00000561248 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
COPS2-208ENST00000561248 TSPYL2Q9H2G4 693 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms