RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-223ENST00000561071 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
MARK3-223ENST00000561071 CHIC1Q5VXU3 224 aa28.38■■■□□ 2.13
MARK3-223ENST00000561071 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
MARK3-223ENST00000561071 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
MARK3-223ENST00000561071 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
MARK3-223ENST00000561071 FOXD1Q16676 465 aa22.69■■□□□ 1.22
MARK3-223ENST00000561071 PPP6R1Q9UPN7 881 aa22.04■■□□□ 1.12
MARK3-223ENST00000561071 ADRA2BP18089 450 aa22.02■■□□□ 1.12
MARK3-223ENST00000561071 PIAS4Q8N2W9 510 aaPredicted RBP21.43■■□□□ 1.02
MARK3-223ENST00000561071 MSH5O43196 834 aa20.75■□□□□ 0.91
MARK3-223ENST00000561071 PPP4R3CPQ6ZMV5 832 aa20.43■□□□□ 0.86
MARK3-223ENST00000561071 KCNA4P22459 653 aa20.25■□□□□ 0.83
MARK3-223ENST00000561071 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
MARK3-223ENST00000561071 MAPK8IP2Q13387 824 aaPredicted RBP19.94■□□□□ 0.78
MARK3-223ENST00000561071 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
MARK3-223ENST00000561071 CNKSR2Q8WXI2 1034 aa19.78■□□□□ 0.76
MARK3-223ENST00000561071 NPM3O75607 178 aaKnown RBP19.69■□□□□ 0.74
MARK3-223ENST00000561071 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
MARK3-223ENST00000561071 RNF216Q9NWF9 866 aaPredicted RBP19.33■□□□□ 0.68
MARK3-223ENST00000561071 SLC4A1APQ9BWU0 796 aaKnown RBP19.28■□□□□ 0.68
MARK3-223ENST00000561071 HOXD11P31277 338 aaPredicted RBP19.21■□□□□ 0.67
MARK3-223ENST00000561071 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
MARK3-223ENST00000561071 DNAJC5BQ9UF47 199 aa18.98■□□□□ 0.63
MARK3-223ENST00000561071 DCAF8L1A6NGE4 600 aa18.72■□□□□ 0.59
MARK3-223ENST00000561071 CSRNP3Q8WYN3 585 aa18.7■□□□□ 0.58
MARK3-223ENST00000561071 ZBTB22O15209 634 aa18.66■□□□□ 0.58
MARK3-223ENST00000561071 POTEDQ86YR6 584 aa18.59■□□□□ 0.57
MARK3-223ENST00000561071 SLC4A2P04920 1241 aa18.55■□□□□ 0.56
MARK3-223ENST00000561071 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
MARK3-223ENST00000561071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.521e-6■■■□□ 19.1
MARK3-223ENST00000561071 MYCNP04198 464 aaPredicted RBP18.14■□□□□ 0.49
MARK3-223ENST00000561071 U3KPZ7 1027 aaPredicted RBP18.08■□□□□ 0.48
MARK3-223ENST00000561071 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
MARK3-223ENST00000561071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
MARK3-223ENST00000561071 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
MARK3-223ENST00000561071 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
MARK3-223ENST00000561071 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
MARK3-223ENST00000561071 ATF5Q9Y2D1 282 aaPredicted RBP17.73■□□□□ 0.43
MARK3-223ENST00000561071 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
MARK3-223ENST00000561071 APLP2Q06481 763 aa17.56■□□□□ 0.4
MARK3-223ENST00000561071 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
MARK3-223ENST00000561071 CAPN15O75808 1086 aa17.42■□□□□ 0.38
MARK3-223ENST00000561071 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
MARK3-223ENST00000561071 ZNF219Q9P2Y4 722 aaPredicted RBP17.37■□□□□ 0.37
MARK3-223ENST00000561071 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
MARK3-223ENST00000561071 CACNB1Q02641 598 aaPredicted RBP17.23■□□□□ 0.35
MARK3-223ENST00000561071 POLA2Q14181 598 aa17.16■□□□□ 0.34
MARK3-223ENST00000561071 ABCB7O75027 752 aa17.15■□□□□ 0.34
MARK3-223ENST00000561071 DSG3P32926 999 aa17.07■□□□□ 0.32
MARK3-223ENST00000561071 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
MARK3-223ENST00000561071 FKBP8Q14318 412 aa16.89■□□□□ 0.29
MARK3-223ENST00000561071 FBLN2P98095 1184 aa16.86■□□□□ 0.29
MARK3-223ENST00000561071 ZBTB12Q9Y330 459 aaPredicted RBP16.8■□□□□ 0.28
MARK3-223ENST00000561071 SPDYE4A6NLX3 237 aa16.63■□□□□ 0.25
MARK3-223ENST00000561071 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
MARK3-223ENST00000561071 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
MARK3-223ENST00000561071 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
MARK3-223ENST00000561071 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
MARK3-223ENST00000561071 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
MARK3-223ENST00000561071 PROM2Q8N271 834 aa16.37■□□□□ 0.21
MARK3-223ENST00000561071 SSUH2Q9Y2M2 353 aa16.33■□□□□ 0.2
MARK3-223ENST00000561071 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
MARK3-223ENST00000561071 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
MARK3-223ENST00000561071 FBXO3Q9UK99 471 aa16.14■□□□□ 0.17
MARK3-223ENST00000561071 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
MARK3-223ENST00000561071 VASPP50552 380 aaPredicted RBP15.97■□□□□ 0.15
MARK3-223ENST00000561071 REM2Q8IYK8 340 aaPredicted RBP15.95■□□□□ 0.14
MARK3-223ENST00000561071 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
MARK3-223ENST00000561071 SPDYE1Q8NFV5 336 aaPredicted RBP15.87■□□□□ 0.13
MARK3-223ENST00000561071 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
MARK3-223ENST00000561071 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
MARK3-223ENST00000561071 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
MARK3-223ENST00000561071 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
MARK3-223ENST00000561071 MIER1Q8N108 512 aa15.75■□□□□ 0.11
MARK3-223ENST00000561071 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
MARK3-223ENST00000561071 AMER1Q5JTC6 1135 aaPredicted RBP15.71■□□□□ 0.11
MARK3-223ENST00000561071 PRR29P0C7W0 189 aa15.7■□□□□ 0.1
MARK3-223ENST00000561071 KLHL34Q8N239 644 aa15.65■□□□□ 0.1
MARK3-223ENST00000561071 PLEKHG5O94827 1062 aa15.58■□□□□ 0.08
MARK3-223ENST00000561071 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
MARK3-223ENST00000561071 ABCC9O60706 1549 aa15.55■□□□□ 0.08
MARK3-223ENST00000561071 SPOCK2Q92563 424 aa15.53■□□□□ 0.08
MARK3-223ENST00000561071 ZBTB47Q9UFB7 747 aaPredicted RBP15.49■□□□□ 0.07
MARK3-223ENST00000561071 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
MARK3-223ENST00000561071 CHRDL2Q6WN34 429 aa15.48■□□□□ 0.07
MARK3-223ENST00000561071 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.06
MARK3-223ENST00000561071 MNX1P50219 401 aaPredicted RBP15.45■□□□□ 0.06
MARK3-223ENST00000561071 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
MARK3-223ENST00000561071 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
MARK3-223ENST00000561071 PIP4P2Q8N4L2 257 aa15.36■□□□□ 0.05
MARK3-223ENST00000561071 PKD2Q13563 968 aa15.35■□□□□ 0.05
MARK3-223ENST00000561071 NUBP1P53384 320 aa15.33■□□□□ 0.04
MARK3-223ENST00000561071 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
MARK3-223ENST00000561071 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
MARK3-223ENST00000561071 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
MARK3-223ENST00000561071 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
MARK3-223ENST00000561071 ECM2O94769 699 aaPredicted RBP15.2■□□□□ 0.02
MARK3-223ENST00000561071 DCAF8Q5TAQ9 597 aa15.2■□□□□ 0.02
MARK3-223ENST00000561071 GSE1Q14687 1217 aa15.17■□□□□ 0.02
MARK3-223ENST00000561071 FAM212AQ96EL1 285 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms