RNA–Protein interactions for RNA: ENST00000561054.1

AC068875.1-201, humanhuman

TSL 3 BASIC

Gene AC068875.1, Length 463 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC068875.1-201ENST00000561054 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
AC068875.1-201ENST00000561054 CHIC1Q5VXU3 224 aa28.13■■■□□ 2.09
AC068875.1-201ENST00000561054 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
AC068875.1-201ENST00000561054 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
AC068875.1-201ENST00000561054 FOXD1Q16676 465 aa23.38■■□□□ 1.33
AC068875.1-201ENST00000561054 PLPPR3Q6T4P5 718 aa22.66■■□□□ 1.22
AC068875.1-201ENST00000561054 MSH5O43196 834 aa22.16■■□□□ 1.14
AC068875.1-201ENST00000561054 PIAS4Q8N2W9 510 aaPredicted RBP22.01■■□□□ 1.11
AC068875.1-201ENST00000561054 ADRA2BP18089 450 aa21.78■■□□□ 1.08
AC068875.1-201ENST00000561054 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
AC068875.1-201ENST00000561054 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
AC068875.1-201ENST00000561054 SCAF1Q9H7N4 1312 aaKnown RBP20.37■□□□□ 0.85
AC068875.1-201ENST00000561054 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.8
AC068875.1-201ENST00000561054 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
AC068875.1-201ENST00000561054 PPP4R3CPQ6ZMV5 832 aa19.73■□□□□ 0.75
AC068875.1-201ENST00000561054 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
AC068875.1-201ENST00000561054 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
AC068875.1-201ENST00000561054 RNF216Q9NWF9 866 aaPredicted RBP19.26■□□□□ 0.67
AC068875.1-201ENST00000561054 DCAF8L1A6NGE4 600 aa19.25■□□□□ 0.67
AC068875.1-201ENST00000561054 NCBP3Q53F19 620 aaKnown RBP19.25■□□□□ 0.67
AC068875.1-201ENST00000561054 CACNB1Q02641 598 aaPredicted RBP18.89■□□□□ 0.61
AC068875.1-201ENST00000561054 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
AC068875.1-201ENST00000561054 RNF39Q9H2S5 420 aa18.74■□□□□ 0.59
AC068875.1-201ENST00000561054 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
AC068875.1-201ENST00000561054 C1QBPQ07021 282 aaKnown RBP18.62■□□□□ 0.57
AC068875.1-201ENST00000561054 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.5■□□□□ 0.55
AC068875.1-201ENST00000561054 KCNA4P22459 653 aa18.3■□□□□ 0.52
AC068875.1-201ENST00000561054 U3KPZ7 1027 aaPredicted RBP17.94■□□□□ 0.46
AC068875.1-201ENST00000561054 APLP2Q06481 763 aa17.92■□□□□ 0.46
AC068875.1-201ENST00000561054 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.84■□□□□ 0.45
AC068875.1-201ENST00000561054 HNRNPUL2Q1KMD3 747 aaKnown RBP17.84■□□□□ 0.45
AC068875.1-201ENST00000561054 CAPN15O75808 1086 aa17.77■□□□□ 0.44
AC068875.1-201ENST00000561054 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
AC068875.1-201ENST00000561054 SAMD1Q6SPF0 538 aaPredicted RBP17.65■□□□□ 0.42
AC068875.1-201ENST00000561054 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
AC068875.1-201ENST00000561054 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
AC068875.1-201ENST00000561054 DSG3P32926 999 aa17.54■□□□□ 0.4
AC068875.1-201ENST00000561054 SLC4A1APQ9BWU0 796 aaKnown RBP17.46■□□□□ 0.39
AC068875.1-201ENST00000561054 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
AC068875.1-201ENST00000561054 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
AC068875.1-201ENST00000561054 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
AC068875.1-201ENST00000561054 ABCB7O75027 752 aa17.22■□□□□ 0.35
AC068875.1-201ENST00000561054 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
AC068875.1-201ENST00000561054 POLA2Q14181 598 aa16.97■□□□□ 0.31
AC068875.1-201ENST00000561054 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
AC068875.1-201ENST00000561054 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
AC068875.1-201ENST00000561054 POTEHQ6S545 545 aa16.75■□□□□ 0.27
AC068875.1-201ENST00000561054 ZBTB22O15209 634 aa16.7■□□□□ 0.26
AC068875.1-201ENST00000561054 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
AC068875.1-201ENST00000561054 AKT1S1Q96B36 256 aa16.53■□□□□ 0.24
AC068875.1-201ENST00000561054 FBLN2P98095 1184 aa16.47■□□□□ 0.23
AC068875.1-201ENST00000561054 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
AC068875.1-201ENST00000561054 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
AC068875.1-201ENST00000561054 SPDYE2BA6NHP3 402 aa16.29■□□□□ 0.2
AC068875.1-201ENST00000561054 SPDYE6P0CI01 402 aa16.29■□□□□ 0.2
AC068875.1-201ENST00000561054 SPDYE2Q495Y8 402 aa16.29■□□□□ 0.2
AC068875.1-201ENST00000561054 REM2Q8IYK8 340 aaPredicted RBP16.24■□□□□ 0.19
AC068875.1-201ENST00000561054 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
AC068875.1-201ENST00000561054 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
AC068875.1-201ENST00000561054 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
AC068875.1-201ENST00000561054 SPDYE1Q8NFV5 336 aaPredicted RBP16■□□□□ 0.15
AC068875.1-201ENST00000561054 MKRN4PQ13434 485 aaPredicted RBP15.98■□□□□ 0.15
AC068875.1-201ENST00000561054 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
AC068875.1-201ENST00000561054 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
AC068875.1-201ENST00000561054 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
AC068875.1-201ENST00000561054 FXR2P51116 673 aaKnown RBP eCLIP15.92■□□□□ 0.14
AC068875.1-201ENST00000561054 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
AC068875.1-201ENST00000561054 HAX1O00165 279 aa15.78■□□□□ 0.12
AC068875.1-201ENST00000561054 SP7Q8TDD2 431 aaPredicted RBP15.77■□□□□ 0.12
AC068875.1-201ENST00000561054 PABPN1Q86U42 306 aaKnown RBP eCLIP15.74■□□□□ 0.11
AC068875.1-201ENST00000561054 PRKAR2AP13861 404 aaKnown RBP15.69■□□□□ 0.1
AC068875.1-201ENST00000561054 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
AC068875.1-201ENST00000561054 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
AC068875.1-201ENST00000561054 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
AC068875.1-201ENST00000561054 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
AC068875.1-201ENST00000561054 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
AC068875.1-201ENST00000561054 CLCN6P51797 869 aa15.31■□□□□ 0.04
AC068875.1-201ENST00000561054 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
AC068875.1-201ENST00000561054 EVX2Q03828 476 aa15.26■□□□□ 0.03
AC068875.1-201ENST00000561054 CD44P16070 742 aaKnown RBP15.23■□□□□ 0.03
AC068875.1-201ENST00000561054 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
AC068875.1-201ENST00000561054 GABBR2O75899 941 aa15.14■□□□□ 0.01
AC068875.1-201ENST00000561054 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
AC068875.1-201ENST00000561054 CREBZFQ9NS37 354 aa15.12■□□□□ 0.01
AC068875.1-201ENST00000561054 PLEKHG5O94827 1062 aa15.06■□□□□ 0
AC068875.1-201ENST00000561054 PROM2Q8N271 834 aa15.02■□□□□ -0
AC068875.1-201ENST00000561054 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
AC068875.1-201ENST00000561054 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
AC068875.1-201ENST00000561054 DCBLD2Q96PD2 775 aa14.93□□□□□ -0.02
AC068875.1-201ENST00000561054 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
AC068875.1-201ENST00000561054 MNX1P50219 401 aaPredicted RBP14.81□□□□□ -0.04
AC068875.1-201ENST00000561054 MIER1Q8N108 512 aa14.8□□□□□ -0.04
AC068875.1-201ENST00000561054 LHX8Q68G74 356 aa14.78□□□□□ -0.04
AC068875.1-201ENST00000561054 PLCD3Q8N3E9 789 aa14.75□□□□□ -0.05
AC068875.1-201ENST00000561054 FKBP8Q14318 412 aa14.71□□□□□ -0.05
AC068875.1-201ENST00000561054 PHF12Q96QT6 1004 aa14.69□□□□□ -0.06
AC068875.1-201ENST00000561054 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
AC068875.1-201ENST00000561054 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
AC068875.1-201ENST00000561054 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
AC068875.1-201ENST00000561054 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms