RNA–Protein interactions for RNA: ENST00000560527.1

USP8-211, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 4

Gene USP8, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-211ENST00000560527 AEBP2Q6ZN18 517 aaPredicted RBP20.22■□□□□ 0.83
USP8-211ENST00000560527 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
USP8-211ENST00000560527 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
USP8-211ENST00000560527 PHF23Q9BUL5 403 aaPredicted RBP17.15■□□□□ 0.34
USP8-211ENST00000560527 FOXD1Q16676 465 aa16.22■□□□□ 0.19
USP8-211ENST00000560527 POTEDQ86YR6 584 aa15.53■□□□□ 0.08
USP8-211ENST00000560527 MSH5O43196 834 aa15.44■□□□□ 0.06
USP8-211ENST00000560527 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
USP8-211ENST00000560527 PLPPR3Q6T4P5 718 aa15.09■□□□□ 0.01
USP8-211ENST00000560527 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
USP8-211ENST00000560527 ADRA2BP18089 450 aa14.85□□□□□ -0.03
USP8-211ENST00000560527 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
USP8-211ENST00000560527 DMRT2Q9Y5R5 561 aa13.75□□□□□ -0.21
USP8-211ENST00000560527 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
USP8-211ENST00000560527 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
USP8-211ENST00000560527 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
USP8-211ENST00000560527 PPP4R3CPQ6ZMV5 832 aa13.14□□□□□ -0.31
USP8-211ENST00000560527 HOXD11P31277 338 aaPredicted RBP13.1□□□□□ -0.31
USP8-211ENST00000560527 RNF39Q9H2S5 420 aa13.06□□□□□ -0.32
USP8-211ENST00000560527 KCNA4P22459 653 aa13.04□□□□□ -0.32
USP8-211ENST00000560527 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
USP8-211ENST00000560527 RNF216Q9NWF9 866 aaPredicted RBP12.96□□□□□ -0.33
USP8-211ENST00000560527 C1QBPQ07021 282 aaKnown RBP12.92□□□□□ -0.34
USP8-211ENST00000560527 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
USP8-211ENST00000560527 DNAJC5BQ9UF47 199 aa12.77□□□□□ -0.37
USP8-211ENST00000560527 NPM3O75607 178 aaKnown RBP12.64□□□□□ -0.39
USP8-211ENST00000560527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.394e-7■■■□□ 15.4
USP8-211ENST00000560527 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
USP8-211ENST00000560527 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
USP8-211ENST00000560527 CAPN15O75808 1086 aa12.2□□□□□ -0.46
USP8-211ENST00000560527 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
USP8-211ENST00000560527 POTEHQ6S545 545 aa12.15□□□□□ -0.46
USP8-211ENST00000560527 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
USP8-211ENST00000560527 DSG3P32926 999 aa12.11□□□□□ -0.47
USP8-211ENST00000560527 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
USP8-211ENST00000560527 APLP2Q06481 763 aa12.01□□□□□ -0.49
USP8-211ENST00000560527 ZBTB22O15209 634 aa11.99□□□□□ -0.49
USP8-211ENST00000560527 FOXD4L1Q9NU39 408 aa11.98□□□□□ -0.49
USP8-211ENST00000560527 TRHP20396 242 aaPredicted RBP11.91□□□□□ -0.5
USP8-211ENST00000560527 ZNF219Q9P2Y4 722 aaPredicted RBP11.9□□□□□ -0.5
USP8-211ENST00000560527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
USP8-211ENST00000560527 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
USP8-211ENST00000560527 SLC4A2P04920 1241 aa11.87□□□□□ -0.51
USP8-211ENST00000560527 ABCB7O75027 752 aa11.81□□□□□ -0.52
USP8-211ENST00000560527 SAMD1Q6SPF0 538 aaPredicted RBP11.76□□□□□ -0.53
USP8-211ENST00000560527 MYCNP04198 464 aaPredicted RBP11.71□□□□□ -0.53
USP8-211ENST00000560527 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
USP8-211ENST00000560527 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
USP8-211ENST00000560527 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
USP8-211ENST00000560527 POLA2Q14181 598 aa11.49□□□□□ -0.57
USP8-211ENST00000560527 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
USP8-211ENST00000560527 AKT1S1Q96B36 256 aa11.31□□□□□ -0.6
USP8-211ENST00000560527 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
USP8-211ENST00000560527 SP7Q8TDD2 431 aaPredicted RBP11.24□□□□□ -0.61
USP8-211ENST00000560527 REM2Q8IYK8 340 aaPredicted RBP11.16□□□□□ -0.62
USP8-211ENST00000560527 PIP4P2Q8N4L2 257 aa11.11□□□□□ -0.63
USP8-211ENST00000560527 HAX1O00165 279 aa11.1□□□□□ -0.63
USP8-211ENST00000560527 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
USP8-211ENST00000560527 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
USP8-211ENST00000560527 FXR2P51116 673 aaKnown RBP eCLIP10.99□□□□□ -0.655e-6■■■□□ 14.9
USP8-211ENST00000560527 FKBP8Q14318 412 aa10.94□□□□□ -0.66
USP8-211ENST00000560527 FBLN2P98095 1184 aa10.9□□□□□ -0.66
USP8-211ENST00000560527 SPDYE2BA6NHP3 402 aa10.88□□□□□ -0.67
USP8-211ENST00000560527 SPDYE6P0CI01 402 aa10.88□□□□□ -0.67
USP8-211ENST00000560527 SPDYE2Q495Y8 402 aa10.88□□□□□ -0.67
USP8-211ENST00000560527 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
USP8-211ENST00000560527 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
USP8-211ENST00000560527 CLEC11AQ9Y240 323 aa10.8□□□□□ -0.68
USP8-211ENST00000560527 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
USP8-211ENST00000560527 EVX2Q03828 476 aa10.76□□□□□ -0.69
USP8-211ENST00000560527 SPDYE4A6NLX3 237 aa10.74□□□□□ -0.69
USP8-211ENST00000560527 ZNF692Q9BU19 519 aaPredicted RBP10.72□□□□□ -0.69
USP8-211ENST00000560527 PROM2Q8N271 834 aa10.66□□□□□ -0.7
USP8-211ENST00000560527 C19orf67A6NJJ6 358 aa10.65□□□□□ -0.7
USP8-211ENST00000560527 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
USP8-211ENST00000560527 GABBR2O75899 941 aa10.6□□□□□ -0.71
USP8-211ENST00000560527 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
USP8-211ENST00000560527 FBXO3Q9UK99 471 aa10.58□□□□□ -0.72
USP8-211ENST00000560527 LHX8Q68G74 356 aa10.55□□□□□ -0.72
USP8-211ENST00000560527 CHADLQ6NUI6 762 aa10.53□□□□□ -0.72
USP8-211ENST00000560527 PABPN1Q86U42 306 aaKnown RBP eCLIP10.51□□□□□ -0.73
USP8-211ENST00000560527 AMER1Q5JTC6 1135 aaPredicted RBP10.46□□□□□ -0.73
USP8-211ENST00000560527 CLCN6P51797 869 aa10.45□□□□□ -0.74
USP8-211ENST00000560527 CD44P16070 742 aaKnown RBP10.42□□□□□ -0.74
USP8-211ENST00000560527 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
USP8-211ENST00000560527 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
USP8-211ENST00000560527 RTN4Q9NQC3 1192 aaKnown RBP10.37□□□□□ -0.75
USP8-211ENST00000560527 DCBLD2Q96PD2 775 aa10.35□□□□□ -0.75
USP8-211ENST00000560527 STAG3Q9UJ98 1225 aa10.35□□□□□ -0.75
USP8-211ENST00000560527 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
USP8-211ENST00000560527 ZRANB1Q9UGI0 708 aa10.24□□□□□ -0.77
USP8-211ENST00000560527 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
USP8-211ENST00000560527 ZNF579Q8NAF0 562 aaKnown RBP10.22□□□□□ -0.77
USP8-211ENST00000560527 PLSCR2Q9NRY7 297 aa10.2□□□□□ -0.78
USP8-211ENST00000560527 PAK3O75914 559 aaPredicted RBP10.19□□□□□ -0.78
USP8-211ENST00000560527 PLCD3Q8N3E9 789 aa10.15□□□□□ -0.78
USP8-211ENST00000560527 MIER1Q8N108 512 aa10.14□□□□□ -0.79
USP8-211ENST00000560527 PLEKHG5O94827 1062 aa10.13□□□□□ -0.79
USP8-211ENST00000560527 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
USP8-211ENST00000560527 ZBTB47Q9UFB7 747 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms