RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-223ENST00000560369 NISCHQ9Y2I1 1504 aa12.32□□□□□ -0.44
LRRC49-223ENST00000560369 AEBP2Q6ZN18 517 aaPredicted RBP11.44□□□□□ -0.58
LRRC49-223ENST00000560369 CHIC1Q5VXU3 224 aa10.67□□□□□ -0.7
LRRC49-223ENST00000560369 SHROOM4Q9ULL8 1493 aa10.54□□□□□ -0.72
LRRC49-223ENST00000560369 CCDC180Q9P1Z9 1646 aa10.5□□□□□ -0.73
LRRC49-223ENST00000560369 ZCCHC6Q5VYS8 1495 aaKnown RBP10.39□□□□□ -0.75
LRRC49-223ENST00000560369 DCAF8L2P0C7V8 631 aa10.32□□□□□ -0.76
LRRC49-223ENST00000560369 SUPT5HO00267 1087 aaKnown RBP10.24□□□□□ -0.77
LRRC49-223ENST00000560369 DCAF1Q9Y4B6 1507 aa10.03□□□□□ -0.8
LRRC49-223ENST00000560369 SCRIBQ14160 1630 aa9.92□□□□□ -0.82
LRRC49-223ENST00000560369 ABCC9O60706 1549 aa9.91□□□□□ -0.82
LRRC49-223ENST00000560369 MYO15BQ96JP2 1530 aa9.91□□□□□ -0.82
LRRC49-223ENST00000560369 SENP3Q9H4L4 574 aaPredicted RBP9.78□□□□□ -0.84
LRRC49-223ENST00000560369 RSF1Q96T23 1441 aaPredicted RBP9.72□□□□□ -0.85
LRRC49-223ENST00000560369 NACADO15069 1562 aa9.7□□□□□ -0.86
LRRC49-223ENST00000560369 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
LRRC49-223ENST00000560369 RB1CC1Q8TDY2 1594 aa9.67□□□□□ -0.86
LRRC49-223ENST00000560369 LOC105371045A0A1W2PR82 267 aa9.66□□□□□ -0.86
LRRC49-223ENST00000560369 PHF23Q9BUL5 403 aaPredicted RBP9.64□□□□□ -0.87
LRRC49-223ENST00000560369 MROH2BQ7Z745 1585 aa9.63□□□□□ -0.87
LRRC49-223ENST00000560369 UNC13AQ9UPW8 1703 aa9.62□□□□□ -0.87
LRRC49-223ENST00000560369 WIZO95785 1651 aa9.61□□□□□ -0.87
LRRC49-223ENST00000560369 FAM9AQ8IZU1 332 aaPredicted RBP9.5□□□□□ -0.89
LRRC49-223ENST00000560369 EHMT2Q96KQ7 1210 aa9.49□□□□□ -0.89
LRRC49-223ENST00000560369 PABPN1Q86U42 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
LRRC49-223ENST00000560369 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
LRRC49-223ENST00000560369 PCGF6Q9BYE7 350 aa9.48□□□□□ -0.89
LRRC49-223ENST00000560369 BAZ1AQ9NRL2 1556 aaPredicted RBP9.45□□□□□ -0.9
LRRC49-223ENST00000560369 SMARCA4P51532 1647 aa9.43□□□□□ -0.9
LRRC49-223ENST00000560369 BICRAQ9NZM4 1560 aa9.43□□□□□ -0.9
LRRC49-223ENST00000560369 EIF4G1Q04637 1599 aaKnown RBP9.39□□□□□ -0.91
LRRC49-223ENST00000560369 ABCC8Q09428 1581 aa9.36□□□□□ -0.91
LRRC49-223ENST00000560369 CCDC88BA6NC98 1476 aa9.36□□□□□ -0.91
LRRC49-223ENST00000560369 TOP2AP11388 1531 aaKnown RBP9.36□□□□□ -0.91
LRRC49-223ENST00000560369 HRCP23327 699 aa9.35□□□□□ -0.91
LRRC49-223ENST00000560369 SMARCA2P51531 1590 aa9.35□□□□□ -0.91
LRRC49-223ENST00000560369 PPARGC1BQ86YN6 1023 aaKnown RBP9.32□□□□□ -0.92
LRRC49-223ENST00000560369 TRIM26Q12899 539 aaPredicted RBP9.23□□□□□ -0.93
LRRC49-223ENST00000560369 RUSC2Q8N2Y8 1516 aa9.23□□□□□ -0.93
LRRC49-223ENST00000560369 SOGA1O94964 1423 aa9.22□□□□□ -0.93
LRRC49-223ENST00000560369 PEG3Q9GZU2 1588 aa9.2□□□□□ -0.94
LRRC49-223ENST00000560369 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
LRRC49-223ENST00000560369 FOXD1Q16676 465 aa9.17□□□□□ -0.94
LRRC49-223ENST00000560369 SYNJ1O43426 1573 aa9.15□□□□□ -0.95
LRRC49-223ENST00000560369 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.95
LRRC49-223ENST00000560369 TTBK1Q5TCY1 1321 aaPredicted RBP9.13□□□□□ -0.95
LRRC49-223ENST00000560369 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
LRRC49-223ENST00000560369 CSRNP3Q8WYN3 585 aa9.08□□□□□ -0.96
LRRC49-223ENST00000560369 CEP162Q5TB80 1403 aa9.07□□□□□ -0.96
LRRC49-223ENST00000560369 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
LRRC49-223ENST00000560369 TNIKQ9UKE5 1360 aa9.02□□□□□ -0.97
LRRC49-223ENST00000560369 RANGAP1P46060 587 aaPredicted RBP9.01□□□□□ -0.97
LRRC49-223ENST00000560369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9□□□□□ -0.97
LRRC49-223ENST00000560369 NCAPD3P42695 1498 aa8.99□□□□□ -0.97
LRRC49-223ENST00000560369 GOLGA3Q08378 1498 aa8.99□□□□□ -0.97
LRRC49-223ENST00000560369 EEA1Q15075 1411 aa8.98□□□□□ -0.97
LRRC49-223ENST00000560369 TOP2BQ02880 1626 aa8.98□□□□□ -0.97
LRRC49-223ENST00000560369 RAPGEF2Q9Y4G8 1499 aa8.98□□□□□ -0.97
LRRC49-223ENST00000560369 HMGXB3Q12766 1538 aa8.97□□□□□ -0.97
LRRC49-223ENST00000560369 BIVM-ERCC5R4GMW8 1640 aa8.97□□□□□ -0.97
LRRC49-223ENST00000560369 CUX1P39880 1505 aa8.96□□□□□ -0.97
LRRC49-223ENST00000560369 POTEDQ86YR6 584 aa8.96□□□□□ -0.97
LRRC49-223ENST00000560369 KIF21BO75037 1637 aa8.96□□□□□ -0.98
LRRC49-223ENST00000560369 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
LRRC49-223ENST00000560369 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
LRRC49-223ENST00000560369 CFTRP13569 1480 aa8.91□□□□□ -0.98
LRRC49-223ENST00000560369 CLIP1P30622 1438 aa8.9□□□□□ -0.98
LRRC49-223ENST00000560369 PRDM2Q13029 1718 aa8.89□□□□□ -0.99
LRRC49-223ENST00000560369 CCER1Q8TC90 406 aaPredicted RBP8.89□□□□□ -0.99
LRRC49-223ENST00000560369 ZEB1P37275 1124 aaPredicted RBP8.88□□□□□ -0.99
LRRC49-223ENST00000560369 DNAJC5BQ9UF47 199 aa8.85□□□□□ -0.99
LRRC49-223ENST00000560369 PRXQ9BXM0 1461 aa8.85□□□□□ -0.99
LRRC49-223ENST00000560369 HNRNPUL2Q1KMD3 747 aaKnown RBP8.84□□□□□ -0.99
LRRC49-223ENST00000560369 VPS8Q8N3P4 1428 aa8.84□□□□□ -0.99
LRRC49-223ENST00000560369 NESP48681 1621 aa8.83□□□□□ -1
LRRC49-223ENST00000560369 ARAP1Q96P48 1450 aa8.82□□□□□ -1
LRRC49-223ENST00000560369 CADPSQ9ULU8 1353 aa8.82□□□□□ -1
LRRC49-223ENST00000560369 SCAF1Q9H7N4 1312 aaKnown RBP8.81□□□□□ -1
LRRC49-223ENST00000560369 KIF27Q86VH2 1401 aa8.8□□□□□ -1
LRRC49-223ENST00000560369 ERICH3Q5RHP9 1530 aa8.8□□□□□ -1
LRRC49-223ENST00000560369 CUX2O14529 1486 aa8.8□□□□□ -1
LRRC49-223ENST00000560369 FGD5Q6ZNL6 1462 aa8.8□□□□□ -1
LRRC49-223ENST00000560369 KANK4Q5T7N3 995 aaPredicted RBP8.79□□□□□ -1
LRRC49-223ENST00000560369 IGF1RP08069 1367 aa8.77□□□□□ -1.01
LRRC49-223ENST00000560369 FANCD2Q9BXW9 1451 aa8.77□□□□□ -1.01
LRRC49-223ENST00000560369 RAD54L2Q9Y4B4 1467 aa8.77□□□□□ -1.01
LRRC49-223ENST00000560369 ARHGAP35Q9NRY4 1499 aa8.76□□□□□ -1.01
LRRC49-223ENST00000560369 APLP2Q06481 763 aa8.74□□□□□ -1.01
LRRC49-223ENST00000560369 P3H3Q8IVL6 736 aa8.72□□□□□ -1.01
LRRC49-223ENST00000560369 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.01
LRRC49-223ENST00000560369 TOPBP1Q92547 1522 aa8.71□□□□□ -1.02
LRRC49-223ENST00000560369 PELP1Q8IZL8 1130 aaKnown RBP8.71□□□□□ -1.02
LRRC49-223ENST00000560369 POLA1P09884 1462 aaPredicted RBP8.7□□□□□ -1.02
LRRC49-223ENST00000560369 DNMBPQ6XZF7 1577 aa8.69□□□□□ -1.02
LRRC49-223ENST00000560369 URB2Q14146 1524 aaKnown RBP8.69□□□□□ -1.02
LRRC49-223ENST00000560369 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
LRRC49-223ENST00000560369 MSH5O43196 834 aa8.67□□□□□ -1.02
LRRC49-223ENST00000560369 ITGAEP38570 1179 aa8.67□□□□□ -1.02
LRRC49-223ENST00000560369 ABCA10Q8WWZ4 1543 aa8.65□□□□□ -1.03
LRRC49-223ENST00000560369 TDRD9Q8NDG6 1382 aaKnown RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms