RNA–Protein interactions for RNA: ENST00000560329.1

NPM1P42-201, Transcript of nucleophosmin 1 pseudogene 42, humanhuman

BASIC

Gene NPM1P42, Length 862 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P42-201ENST00000560329 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
NPM1P42-201ENST00000560329 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
NPM1P42-201ENST00000560329 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
NPM1P42-201ENST00000560329 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
NPM1P42-201ENST00000560329 FOXD1Q16676 465 aa13.64□□□□□ -0.23
NPM1P42-201ENST00000560329 PLPPR3Q6T4P5 718 aa13.64□□□□□ -0.23
NPM1P42-201ENST00000560329 PPP6R1Q9UPN7 881 aa12.95□□□□□ -0.34
NPM1P42-201ENST00000560329 ADRA2BP18089 450 aa12.91□□□□□ -0.34
NPM1P42-201ENST00000560329 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
NPM1P42-201ENST00000560329 MSH5O43196 834 aa12.6□□□□□ -0.39
NPM1P42-201ENST00000560329 POTEDQ86YR6 584 aa12.39□□□□□ -0.43
NPM1P42-201ENST00000560329 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
NPM1P42-201ENST00000560329 KCNA4P22459 653 aa12.23□□□□□ -0.45
NPM1P42-201ENST00000560329 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
NPM1P42-201ENST00000560329 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
NPM1P42-201ENST00000560329 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
NPM1P42-201ENST00000560329 EHMT2Q96KQ7 1210 aa11.77□□□□□ -0.53
NPM1P42-201ENST00000560329 NPM3O75607 178 aaKnown RBP11.71□□□□□ -0.53
NPM1P42-201ENST00000560329 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
NPM1P42-201ENST00000560329 SLC4A1APQ9BWU0 796 aaKnown RBP11.69□□□□□ -0.54
NPM1P42-201ENST00000560329 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
NPM1P42-201ENST00000560329 DMRT2Q9Y5R5 561 aa11.64□□□□□ -0.55
NPM1P42-201ENST00000560329 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
NPM1P42-201ENST00000560329 RNF216Q9NWF9 866 aaPredicted RBP11.35□□□□□ -0.59
NPM1P42-201ENST00000560329 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
NPM1P42-201ENST00000560329 ZBTB22O15209 634 aa11.29□□□□□ -0.6
NPM1P42-201ENST00000560329 HOXD11P31277 338 aaPredicted RBP11.28□□□□□ -0.6
NPM1P42-201ENST00000560329 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
NPM1P42-201ENST00000560329 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
NPM1P42-201ENST00000560329 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
NPM1P42-201ENST00000560329 RNF39Q9H2S5 420 aa10.82□□□□□ -0.68
NPM1P42-201ENST00000560329 MYCNP04198 464 aaPredicted RBP10.78□□□□□ -0.68
NPM1P42-201ENST00000560329 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPM1P42-201ENST00000560329 ATXN8OSP0DMR3 200 aa10.72□□□□□ -0.69
NPM1P42-201ENST00000560329 CACNB1Q02641 598 aaPredicted RBP10.71□□□□□ -0.69
NPM1P42-201ENST00000560329 C1QBPQ07021 282 aaKnown RBP10.62□□□□□ -0.71
NPM1P42-201ENST00000560329 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
NPM1P42-201ENST00000560329 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
NPM1P42-201ENST00000560329 ABCC9O60706 1549 aa10.53□□□□□ -0.72
NPM1P42-201ENST00000560329 ATF5Q9Y2D1 282 aaPredicted RBP10.52□□□□□ -0.73
NPM1P42-201ENST00000560329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
NPM1P42-201ENST00000560329 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
NPM1P42-201ENST00000560329 SAMD1Q6SPF0 538 aaPredicted RBP10.49□□□□□ -0.73
NPM1P42-201ENST00000560329 ZCCHC6Q5VYS8 1495 aaKnown RBP10.42□□□□□ -0.74
NPM1P42-201ENST00000560329 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
NPM1P42-201ENST00000560329 FKBP8Q14318 412 aa10.34□□□□□ -0.75
NPM1P42-201ENST00000560329 CAPN15O75808 1086 aa10.31□□□□□ -0.76
NPM1P42-201ENST00000560329 APLP2Q06481 763 aa10.28□□□□□ -0.76
NPM1P42-201ENST00000560329 ZNF219Q9P2Y4 722 aaPredicted RBP10.28□□□□□ -0.76
NPM1P42-201ENST00000560329 DCAF1Q9Y4B6 1507 aa10.23□□□□□ -0.77
NPM1P42-201ENST00000560329 TRHP20396 242 aaPredicted RBP10.22□□□□□ -0.77
NPM1P42-201ENST00000560329 DSG3P32926 999 aa10.21□□□□□ -0.77
NPM1P42-201ENST00000560329 SHROOM4Q9ULL8 1493 aa10.21□□□□□ -0.78
NPM1P42-201ENST00000560329 ABCB7O75027 752 aa10.16□□□□□ -0.78
NPM1P42-201ENST00000560329 MKRN4PQ13434 485 aaPredicted RBP10.09□□□□□ -0.79
NPM1P42-201ENST00000560329 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
NPM1P42-201ENST00000560329 SUPT5HO00267 1087 aaKnown RBP10.06□□□□□ -0.8
NPM1P42-201ENST00000560329 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
NPM1P42-201ENST00000560329 POLA2Q14181 598 aa10.04□□□□□ -0.8
NPM1P42-201ENST00000560329 SPDYE4A6NLX3 237 aa9.99□□□□□ -0.81
NPM1P42-201ENST00000560329 FBLN2P98095 1184 aa9.98□□□□□ -0.81
NPM1P42-201ENST00000560329 MYO15BQ96JP2 1530 aa9.96□□□□□ -0.82
NPM1P42-201ENST00000560329 PROM2Q8N271 834 aa9.93□□□□□ -0.82
NPM1P42-201ENST00000560329 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
NPM1P42-201ENST00000560329 RB1CC1Q8TDY2 1594 aa9.86□□□□□ -0.83
NPM1P42-201ENST00000560329 FBXO3Q9UK99 471 aa9.86□□□□□ -0.83
NPM1P42-201ENST00000560329 DCAF8L2P0C7V8 631 aa9.85□□□□□ -0.83
NPM1P42-201ENST00000560329 UNC13AQ9UPW8 1703 aa9.75□□□□□ -0.85
NPM1P42-201ENST00000560329 VASPP50552 380 aaPredicted RBP9.74□□□□□ -0.85
NPM1P42-201ENST00000560329 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
NPM1P42-201ENST00000560329 NACADO15069 1562 aa9.72□□□□□ -0.85
NPM1P42-201ENST00000560329 HRCP23327 699 aa9.71□□□□□ -0.86
NPM1P42-201ENST00000560329 OSCARQ8IYS5 282 aa9.71□□□□□ -0.86
NPM1P42-201ENST00000560329 BICRAQ9NZM4 1560 aa9.69□□□□□ -0.86
NPM1P42-201ENST00000560329 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
NPM1P42-201ENST00000560329 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
NPM1P42-201ENST00000560329 RBM42Q9BTD8 480 aaKnown RBP9.67□□□□□ -0.86
NPM1P42-201ENST00000560329 ZNF692Q9BU19 519 aaPredicted RBP9.67□□□□□ -0.86
NPM1P42-201ENST00000560329 SCRIBQ14160 1630 aa9.67□□□□□ -0.86
NPM1P42-201ENST00000560329 IFNLR1Q8IU57 520 aaPredicted RBP9.66□□□□□ -0.86
NPM1P42-201ENST00000560329 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
NPM1P42-201ENST00000560329 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
NPM1P42-201ENST00000560329 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
NPM1P42-201ENST00000560329 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
NPM1P42-201ENST00000560329 POTEHQ6S545 545 aa9.59□□□□□ -0.87
NPM1P42-201ENST00000560329 PCGF6Q9BYE7 350 aa9.55□□□□□ -0.88
NPM1P42-201ENST00000560329 STAG3Q9UJ98 1225 aa9.54□□□□□ -0.88
NPM1P42-201ENST00000560329 TRIM26Q12899 539 aaPredicted RBP9.52□□□□□ -0.89
NPM1P42-201ENST00000560329 CC2D2AQ9P2K1 1620 aa9.52□□□□□ -0.89
NPM1P42-201ENST00000560329 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
NPM1P42-201ENST00000560329 DNAJC5Q9H3Z4 198 aa9.51□□□□□ -0.89
NPM1P42-201ENST00000560329 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
NPM1P42-201ENST00000560329 PKD2Q13563 968 aa9.49□□□□□ -0.89
NPM1P42-201ENST00000560329 LOC105371045A0A1W2PR82 267 aa9.48□□□□□ -0.89
NPM1P42-201ENST00000560329 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
NPM1P42-201ENST00000560329 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
NPM1P42-201ENST00000560329 MROH2BQ7Z745 1585 aa9.46□□□□□ -0.89
NPM1P42-201ENST00000560329 REM2Q8IYK8 340 aaPredicted RBP9.46□□□□□ -0.9
NPM1P42-201ENST00000560329 KLHL34Q8N239 644 aa9.45□□□□□ -0.9
NPM1P42-201ENST00000560329 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms