RNA–Protein interactions for RNA: ENST00000560312.5

ALDH1A2-221, Transcript of aldehyde dehydrogenase 1 family member A2, humanhuman

TSL 1 (best)

Gene ALDH1A2, Length 3,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A2-221ENST00000560312 NISCHQ9Y2I1 1504 aa18.85■□□□□ 0.61
ALDH1A2-221ENST00000560312 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
ALDH1A2-221ENST00000560312 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
ALDH1A2-221ENST00000560312 DCAF1Q9Y4B6 1507 aa15.92■□□□□ 0.14
ALDH1A2-221ENST00000560312 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
ALDH1A2-221ENST00000560312 ABCC9O60706 1549 aa15.2■□□□□ 0.02
ALDH1A2-221ENST00000560312 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
ALDH1A2-221ENST00000560312 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0
ALDH1A2-221ENST00000560312 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
ALDH1A2-221ENST00000560312 NACADO15069 1562 aa14.96□□□□□ -0.01
ALDH1A2-221ENST00000560312 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
ALDH1A2-221ENST00000560312 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
ALDH1A2-221ENST00000560312 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.05
ALDH1A2-221ENST00000560312 MYT1Q01538 1121 aa14.76□□□□□ -0.05
ALDH1A2-221ENST00000560312 HRCP23327 699 aa14.7□□□□□ -0.06
ALDH1A2-221ENST00000560312 SCRIBQ14160 1630 aa14.68□□□□□ -0.06
ALDH1A2-221ENST00000560312 EIF4G1Q04637 1599 aaKnown RBP14.67□□□□□ -0.06
ALDH1A2-221ENST00000560312 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
ALDH1A2-221ENST00000560312 PCGF6Q9BYE7 350 aa14.55□□□□□ -0.08
ALDH1A2-221ENST00000560312 PPARGC1BQ86YN6 1023 aaKnown RBP14.54□□□□□ -0.08
ALDH1A2-221ENST00000560312 MROH2BQ7Z745 1585 aa14.46□□□□□ -0.09
ALDH1A2-221ENST00000560312 UNC13AQ9UPW8 1703 aa14.44□□□□□ -0.1
ALDH1A2-221ENST00000560312 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
ALDH1A2-221ENST00000560312 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
ALDH1A2-221ENST00000560312 WIZO95785 1651 aa14.4□□□□□ -0.1
ALDH1A2-221ENST00000560312 DCAF8L2P0C7V8 631 aa14.39□□□□□ -0.11
ALDH1A2-221ENST00000560312 SLC24A1O60721 1099 aa14.38□□□□□ -0.11
ALDH1A2-221ENST00000560312 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
ALDH1A2-221ENST00000560312 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
ALDH1A2-221ENST00000560312 CECR2Q9BXF3 1484 aa14.35□□□□□ -0.11
ALDH1A2-221ENST00000560312 ZEB1P37275 1124 aaPredicted RBP14.3□□□□□ -0.12
ALDH1A2-221ENST00000560312 SMARCA2P51531 1590 aa14.27□□□□□ -0.12
ALDH1A2-221ENST00000560312 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
ALDH1A2-221ENST00000560312 EEA1Q15075 1411 aa14.23□□□□□ -0.13
ALDH1A2-221ENST00000560312 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
ALDH1A2-221ENST00000560312 BICRAQ9NZM4 1560 aa14.15□□□□□ -0.14
ALDH1A2-221ENST00000560312 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
ALDH1A2-221ENST00000560312 TTBK1Q5TCY1 1321 aaPredicted RBP14.13□□□□□ -0.15
ALDH1A2-221ENST00000560312 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
ALDH1A2-221ENST00000560312 KIF21BO75037 1637 aa14.07□□□□□ -0.16
ALDH1A2-221ENST00000560312 TNIKQ9UKE5 1360 aa14.02□□□□□ -0.17
ALDH1A2-221ENST00000560312 SCAF1Q9H7N4 1312 aaKnown RBP13.98□□□□□ -0.17
ALDH1A2-221ENST00000560312 BAZ1BQ9UIG0 1483 aaKnown RBP13.96□□□□□ -0.17
ALDH1A2-221ENST00000560312 BIVM-ERCC5R4GMW8 1640 aa13.96□□□□□ -0.18
ALDH1A2-221ENST00000560312 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
ALDH1A2-221ENST00000560312 ABCC8Q09428 1581 aa13.91□□□□□ -0.18
ALDH1A2-221ENST00000560312 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
ALDH1A2-221ENST00000560312 GOLGA3Q08378 1498 aa13.9□□□□□ -0.19
ALDH1A2-221ENST00000560312 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
ALDH1A2-221ENST00000560312 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
ALDH1A2-221ENST00000560312 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
ALDH1A2-221ENST00000560312 CEP162Q5TB80 1403 aa13.85□□□□□ -0.19
ALDH1A2-221ENST00000560312 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
ALDH1A2-221ENST00000560312 CEP164Q9UPV0 1460 aa13.85□□□□□ -0.19
ALDH1A2-221ENST00000560312 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
ALDH1A2-221ENST00000560312 FAM9AQ8IZU1 332 aaPredicted RBP13.84□□□□□ -0.19
ALDH1A2-221ENST00000560312 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
ALDH1A2-221ENST00000560312 SOGA1O94964 1423 aa13.76□□□□□ -0.21
ALDH1A2-221ENST00000560312 NCAPD3P42695 1498 aa13.72□□□□□ -0.21
ALDH1A2-221ENST00000560312 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
ALDH1A2-221ENST00000560312 BCL11AQ9H165 835 aa13.71□□□□□ -0.21
ALDH1A2-221ENST00000560312 VPS8Q8N3P4 1428 aa13.67□□□□□ -0.22
ALDH1A2-221ENST00000560312 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
ALDH1A2-221ENST00000560312 PRXQ9BXM0 1461 aa13.66□□□□□ -0.22
ALDH1A2-221ENST00000560312 MAP3K1Q13233 1512 aa13.64□□□□□ -0.23
ALDH1A2-221ENST00000560312 CUX2O14529 1486 aa13.62□□□□□ -0.23
ALDH1A2-221ENST00000560312 CLSPNQ9HAW4 1339 aa13.6□□□□□ -0.23
ALDH1A2-221ENST00000560312 CFTRP13569 1480 aa13.57□□□□□ -0.24
ALDH1A2-221ENST00000560312 CLIP1P30622 1438 aa13.56□□□□□ -0.24
ALDH1A2-221ENST00000560312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
ALDH1A2-221ENST00000560312 CUX1P39880 1505 aa13.52□□□□□ -0.25
ALDH1A2-221ENST00000560312 NEUROD1Q13562 356 aa13.52□□□□□ -0.25
ALDH1A2-221ENST00000560312 ERICH6Q7L0X2 663 aa13.52□□□□□ -0.25
ALDH1A2-221ENST00000560312 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
ALDH1A2-221ENST00000560312 RRBP1Q9P2E9 1410 aaKnown RBP13.5□□□□□ -0.25
ALDH1A2-221ENST00000560312 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
ALDH1A2-221ENST00000560312 CCER1Q8TC90 406 aaPredicted RBP13.48□□□□□ -0.25
ALDH1A2-221ENST00000560312 ACIN1Q9UKV3 1341 aaKnown RBP13.47□□□□□ -0.25
ALDH1A2-221ENST00000560312 APLP2Q06481 763 aa13.46□□□□□ -0.25
ALDH1A2-221ENST00000560312 GTF3C3Q9Y5Q9 886 aa13.45□□□□□ -0.26
ALDH1A2-221ENST00000560312 CFAP43Q8NDM7 1665 aa13.44□□□□□ -0.26
ALDH1A2-221ENST00000560312 KIF27Q86VH2 1401 aa13.42□□□□□ -0.26
ALDH1A2-221ENST00000560312 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
ALDH1A2-221ENST00000560312 CENPBP07199 599 aaPredicted RBP13.38□□□□□ -0.27
ALDH1A2-221ENST00000560312 DIEXFQ68CQ4 756 aaKnown RBP13.37□□□□□ -0.27
ALDH1A2-221ENST00000560312 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
ALDH1A2-221ENST00000560312 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
ALDH1A2-221ENST00000560312 CUL7Q14999 1698 aa13.35□□□□□ -0.27
ALDH1A2-221ENST00000560312 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
ALDH1A2-221ENST00000560312 AQRO60306 1485 aaKnown RBP eCLIP13.34□□□□□ -0.27
ALDH1A2-221ENST00000560312 TIAM1Q13009 1591 aa13.34□□□□□ -0.27
ALDH1A2-221ENST00000560312 EFCAB5A4FU69 1503 aa13.33□□□□□ -0.27
ALDH1A2-221ENST00000560312 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.33□□□□□ -0.28
ALDH1A2-221ENST00000560312 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
ALDH1A2-221ENST00000560312 KIF21AQ7Z4S6 1674 aa13.33□□□□□ -0.28
ALDH1A2-221ENST00000560312 UBTFP17480 764 aaKnown RBP13.32□□□□□ -0.28
ALDH1A2-221ENST00000560312 CTTNBP2Q8WZ74 1663 aa13.3□□□□□ -0.28
ALDH1A2-221ENST00000560312 DNMBPQ6XZF7 1577 aa13.29□□□□□ -0.28
ALDH1A2-221ENST00000560312 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
ALDH1A2-221ENST00000560312 DHX57Q6P158 1386 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms