RNA–Protein interactions for RNA: ENST00000560133.5

LINS1-207, Transcript of lines homolog 1, humanhuman

TSL 2 BASIC

Gene LINS1, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-207ENST00000560133 AEBP2Q6ZN18 517 aaPredicted RBP26.03■■□□□ 1.76
LINS1-207ENST00000560133 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
LINS1-207ENST00000560133 SENP3Q9H4L4 574 aaPredicted RBP22.29■■□□□ 1.16
LINS1-207ENST00000560133 PHF23Q9BUL5 403 aaPredicted RBP21.94■■□□□ 1.1
LINS1-207ENST00000560133 FOXD1Q16676 465 aa20.83■□□□□ 0.93
LINS1-207ENST00000560133 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
LINS1-207ENST00000560133 MSH5O43196 834 aa19.68■□□□□ 0.74
LINS1-207ENST00000560133 PIAS4Q8N2W9 510 aaPredicted RBP19.37■□□□□ 0.69
LINS1-207ENST00000560133 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
LINS1-207ENST00000560133 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
LINS1-207ENST00000560133 ADRA2BP18089 450 aa19.04■□□□□ 0.64
LINS1-207ENST00000560133 MAPK8IP2Q13387 824 aaPredicted RBP17.63■□□□□ 0.41
LINS1-207ENST00000560133 DMRT2Q9Y5R5 561 aa17.59■□□□□ 0.41
LINS1-207ENST00000560133 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
LINS1-207ENST00000560133 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
LINS1-207ENST00000560133 DCAF8L1A6NGE4 600 aa16.94■□□□□ 0.3
LINS1-207ENST00000560133 PPP4R3CPQ6ZMV5 832 aa16.79■□□□□ 0.28
LINS1-207ENST00000560133 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
LINS1-207ENST00000560133 RNF39Q9H2S5 420 aa16.74■□□□□ 0.27
LINS1-207ENST00000560133 CNKSR2Q8WXI2 1034 aa16.58■□□□□ 0.24
LINS1-207ENST00000560133 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
LINS1-207ENST00000560133 C1QBPQ07021 282 aaKnown RBP16.47■□□□□ 0.23
LINS1-207ENST00000560133 DNAJC5BQ9UF47 199 aa16.28■□□□□ 0.2
LINS1-207ENST00000560133 KCNA4P22459 653 aa16.19■□□□□ 0.18
LINS1-207ENST00000560133 NCBP3Q53F19 620 aaKnown RBP16.01■□□□□ 0.15
LINS1-207ENST00000560133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.15
LINS1-207ENST00000560133 NPM3O75607 178 aaKnown RBP15.82■□□□□ 0.12
LINS1-207ENST00000560133 U3KPZ7 1027 aaPredicted RBP15.6■□□□□ 0.09
LINS1-207ENST00000560133 POTEHQ6S545 545 aa15.57■□□□□ 0.08
LINS1-207ENST00000560133 CAPN15O75808 1086 aa15.53■□□□□ 0.08
LINS1-207ENST00000560133 DSG3P32926 999 aa15.52■□□□□ 0.08
LINS1-207ENST00000560133 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.08
LINS1-207ENST00000560133 SLC4A1APQ9BWU0 796 aaKnown RBP15.38■□□□□ 0.05
LINS1-207ENST00000560133 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
LINS1-207ENST00000560133 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
LINS1-207ENST00000560133 APLP2Q06481 763 aa15.14■□□□□ 0.01
LINS1-207ENST00000560133 ABCB7O75027 752 aa15.13■□□□□ 0.01
LINS1-207ENST00000560133 ZNF219Q9P2Y4 722 aaPredicted RBP15.12■□□□□ 0.01
LINS1-207ENST00000560133 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
LINS1-207ENST00000560133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.01□□□□□ -0.01
LINS1-207ENST00000560133 HNRNPUL2Q1KMD3 747 aaKnown RBP15.01□□□□□ -0.01
LINS1-207ENST00000560133 ZBTB22O15209 634 aa14.93□□□□□ -0.02
LINS1-207ENST00000560133 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
LINS1-207ENST00000560133 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
LINS1-207ENST00000560133 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
LINS1-207ENST00000560133 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
LINS1-207ENST00000560133 CHRDL2Q6WN34 429 aa14.69□□□□□ -0.06
LINS1-207ENST00000560133 POLA2Q14181 598 aa14.65□□□□□ -0.06
LINS1-207ENST00000560133 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
LINS1-207ENST00000560133 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
LINS1-207ENST00000560133 SP7Q8TDD2 431 aaPredicted RBP14.37□□□□□ -0.11
LINS1-207ENST00000560133 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
LINS1-207ENST00000560133 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
LINS1-207ENST00000560133 ATF5Q9Y2D1 282 aaPredicted RBP14.3□□□□□ -0.12
LINS1-207ENST00000560133 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
LINS1-207ENST00000560133 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
LINS1-207ENST00000560133 OSCARQ8IYS5 282 aa14.2□□□□□ -0.14
LINS1-207ENST00000560133 HAX1O00165 279 aa14.12□□□□□ -0.15
LINS1-207ENST00000560133 PITPNM1O00562 1244 aa14.12□□□□□ -0.15
LINS1-207ENST00000560133 FXR2P51116 673 aaKnown RBP eCLIP14.07□□□□□ -0.16
LINS1-207ENST00000560133 EVX2Q03828 476 aa13.88□□□□□ -0.19
LINS1-207ENST00000560133 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
LINS1-207ENST00000560133 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
LINS1-207ENST00000560133 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
LINS1-207ENST00000560133 FBLN2P98095 1184 aa13.78□□□□□ -0.2
LINS1-207ENST00000560133 PRKAR2AP13861 404 aaKnown RBP13.75□□□□□ -0.21
LINS1-207ENST00000560133 CLEC11AQ9Y240 323 aa13.73□□□□□ -0.21
LINS1-207ENST00000560133 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
LINS1-207ENST00000560133 C19orf67A6NJJ6 358 aa13.64□□□□□ -0.23
LINS1-207ENST00000560133 MKRN4PQ13434 485 aaPredicted RBP13.63□□□□□ -0.23
LINS1-207ENST00000560133 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
LINS1-207ENST00000560133 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
LINS1-207ENST00000560133 GABBR2O75899 941 aa13.56□□□□□ -0.24
LINS1-207ENST00000560133 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
LINS1-207ENST00000560133 LHX8Q68G74 356 aa13.48□□□□□ -0.25
LINS1-207ENST00000560133 PRR29P0C7W0 189 aa13.43□□□□□ -0.26
LINS1-207ENST00000560133 FKBP8Q14318 412 aa13.41□□□□□ -0.26
LINS1-207ENST00000560133 PABPN1Q86U42 306 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINS1-207ENST00000560133 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
LINS1-207ENST00000560133 CD44P16070 742 aaKnown RBP13.29□□□□□ -0.28
LINS1-207ENST00000560133 POTEIP0CG38 1075 aa13.26□□□□□ -0.29
LINS1-207ENST00000560133 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
LINS1-207ENST00000560133 CLCN6P51797 869 aa13.19□□□□□ -0.3
LINS1-207ENST00000560133 PROM2Q8N271 834 aa13.14□□□□□ -0.31
LINS1-207ENST00000560133 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
LINS1-207ENST00000560133 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
LINS1-207ENST00000560133 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
LINS1-207ENST00000560133 PLSCR2Q9NRY7 297 aa13.01□□□□□ -0.33
LINS1-207ENST00000560133 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
LINS1-207ENST00000560133 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
LINS1-207ENST00000560133 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
LINS1-207ENST00000560133 FBXO3Q9UK99 471 aa12.87□□□□□ -0.35
LINS1-207ENST00000560133 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
LINS1-207ENST00000560133 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
LINS1-207ENST00000560133 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
LINS1-207ENST00000560133 PHF12Q96QT6 1004 aa12.81□□□□□ -0.36
LINS1-207ENST00000560133 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
LINS1-207ENST00000560133 POTEMA6NI47 508 aa12.72□□□□□ -0.37
LINS1-207ENST00000560133 VASPP50552 380 aaPredicted RBP12.72□□□□□ -0.37
LINS1-207ENST00000560133 PELP1Q8IZL8 1130 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms