RNA–Protein interactions for RNA: ENST00000560078.1

ZFYVE19-204, Transcript of zinc finger FYVE-type containing 19, humanhuman

TSL 2

Gene ZFYVE19, Length 2,913 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE19-204ENST00000560078 NISCHQ9Y2I1 1504 aa22.57■■□□□ 1.2
ZFYVE19-204ENST00000560078 CCDC180Q9P1Z9 1646 aa19.31■□□□□ 0.68
ZFYVE19-204ENST00000560078 ZCCHC6Q5VYS8 1495 aaKnown RBP19.07■□□□□ 0.64
ZFYVE19-204ENST00000560078 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
ZFYVE19-204ENST00000560078 DCAF8L2P0C7V8 631 aa18.63■□□□□ 0.57
ZFYVE19-204ENST00000560078 SUPT5HO00267 1087 aaKnown RBP18.58■□□□□ 0.56
ZFYVE19-204ENST00000560078 DCAF1Q9Y4B6 1507 aa18.58■□□□□ 0.56
ZFYVE19-204ENST00000560078 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
ZFYVE19-204ENST00000560078 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
ZFYVE19-204ENST00000560078 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
ZFYVE19-204ENST00000560078 ABCC9O60706 1549 aa17.95■□□□□ 0.46
ZFYVE19-204ENST00000560078 NACADO15069 1562 aa17.88■□□□□ 0.45
ZFYVE19-204ENST00000560078 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
ZFYVE19-204ENST00000560078 RB1CC1Q8TDY2 1594 aa17.59■□□□□ 0.41
ZFYVE19-204ENST00000560078 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.4
ZFYVE19-204ENST00000560078 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.39
ZFYVE19-204ENST00000560078 LOC105371045A0A1W2PR82 267 aa17.46■□□□□ 0.39
ZFYVE19-204ENST00000560078 WIZO95785 1651 aa17.41■□□□□ 0.38
ZFYVE19-204ENST00000560078 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
ZFYVE19-204ENST00000560078 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
ZFYVE19-204ENST00000560078 BAZ1AQ9NRL2 1556 aaPredicted RBP17.35■□□□□ 0.37
ZFYVE19-204ENST00000560078 UNC13AQ9UPW8 1703 aa17.33■□□□□ 0.36
ZFYVE19-204ENST00000560078 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.36
ZFYVE19-204ENST00000560078 SMARCA4P51532 1647 aa17.22■□□□□ 0.35
ZFYVE19-204ENST00000560078 HRCP23327 699 aa17.21■□□□□ 0.35
ZFYVE19-204ENST00000560078 TOP2AP11388 1531 aaKnown RBP17.17■□□□□ 0.34
ZFYVE19-204ENST00000560078 FAM9AQ8IZU1 332 aaPredicted RBP17.16■□□□□ 0.34
ZFYVE19-204ENST00000560078 EIF4G1Q04637 1599 aaKnown RBP17.15■□□□□ 0.34
ZFYVE19-204ENST00000560078 BICRAQ9NZM4 1560 aa17.12■□□□□ 0.33
ZFYVE19-204ENST00000560078 PABPN1Q86U42 306 aaKnown RBP eCLIP17.08■□□□□ 0.33
ZFYVE19-204ENST00000560078 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
ZFYVE19-204ENST00000560078 SMARCA2P51531 1590 aa17.06■□□□□ 0.32
ZFYVE19-204ENST00000560078 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
ZFYVE19-204ENST00000560078 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
ZFYVE19-204ENST00000560078 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
ZFYVE19-204ENST00000560078 PEG3Q9GZU2 1588 aa16.93■□□□□ 0.3
ZFYVE19-204ENST00000560078 MYT1Q01538 1121 aa16.89■□□□□ 0.29
ZFYVE19-204ENST00000560078 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
ZFYVE19-204ENST00000560078 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
ZFYVE19-204ENST00000560078 SOGA1O94964 1423 aa16.76■□□□□ 0.27
ZFYVE19-204ENST00000560078 BAZ1BQ9UIG0 1483 aaKnown RBP16.74■□□□□ 0.27
ZFYVE19-204ENST00000560078 EEA1Q15075 1411 aa16.71■□□□□ 0.27
ZFYVE19-204ENST00000560078 WRNQ14191 1432 aaPredicted RBP eCLIP16.7■□□□□ 0.26
ZFYVE19-204ENST00000560078 RUSC2Q8N2Y8 1516 aa16.68■□□□□ 0.26
ZFYVE19-204ENST00000560078 CSRNP3Q8WYN3 585 aa16.66■□□□□ 0.26
ZFYVE19-204ENST00000560078 TNIKQ9UKE5 1360 aa16.63■□□□□ 0.25
ZFYVE19-204ENST00000560078 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
ZFYVE19-204ENST00000560078 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
ZFYVE19-204ENST00000560078 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
ZFYVE19-204ENST00000560078 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
ZFYVE19-204ENST00000560078 UBTFP17480 764 aaKnown RBP16.55■□□□□ 0.24
ZFYVE19-204ENST00000560078 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
ZFYVE19-204ENST00000560078 HMGXB3Q12766 1538 aa16.52■□□□□ 0.24
ZFYVE19-204ENST00000560078 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
ZFYVE19-204ENST00000560078 KIF21BO75037 1637 aa16.48■□□□□ 0.23
ZFYVE19-204ENST00000560078 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
ZFYVE19-204ENST00000560078 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
ZFYVE19-204ENST00000560078 BIVM-ERCC5R4GMW8 1640 aa16.42■□□□□ 0.22
ZFYVE19-204ENST00000560078 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
ZFYVE19-204ENST00000560078 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
ZFYVE19-204ENST00000560078 CLIP1P30622 1438 aa16.35■□□□□ 0.21
ZFYVE19-204ENST00000560078 CFTRP13569 1480 aa16.35■□□□□ 0.21
ZFYVE19-204ENST00000560078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
ZFYVE19-204ENST00000560078 CUX1P39880 1505 aa16.32■□□□□ 0.2
ZFYVE19-204ENST00000560078 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
ZFYVE19-204ENST00000560078 VPS8Q8N3P4 1428 aa16.27■□□□□ 0.19
ZFYVE19-204ENST00000560078 PRXQ9BXM0 1461 aa16.25■□□□□ 0.19
ZFYVE19-204ENST00000560078 ERICH3Q5RHP9 1530 aa16.25■□□□□ 0.19
ZFYVE19-204ENST00000560078 PRDM2Q13029 1718 aa16.24■□□□□ 0.19
ZFYVE19-204ENST00000560078 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
ZFYVE19-204ENST00000560078 RANGAP1P46060 587 aaPredicted RBP16.19■□□□□ 0.18
ZFYVE19-204ENST00000560078 CADPSQ9ULU8 1353 aa16.18■□□□□ 0.18
ZFYVE19-204ENST00000560078 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
ZFYVE19-204ENST00000560078 APLP2Q06481 763 aa16.15■□□□□ 0.18
ZFYVE19-204ENST00000560078 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
ZFYVE19-204ENST00000560078 CUX2O14529 1486 aa16.07■□□□□ 0.16
ZFYVE19-204ENST00000560078 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
ZFYVE19-204ENST00000560078 FGD5Q6ZNL6 1462 aa16.05■□□□□ 0.16
ZFYVE19-204ENST00000560078 IGF1RP08069 1367 aa16.05■□□□□ 0.16
ZFYVE19-204ENST00000560078 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
ZFYVE19-204ENST00000560078 ARHGAP35Q9NRY4 1499 aa16■□□□□ 0.15
ZFYVE19-204ENST00000560078 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
ZFYVE19-204ENST00000560078 KANK4Q5T7N3 995 aaPredicted RBP15.97■□□□□ 0.15
ZFYVE19-204ENST00000560078 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
ZFYVE19-204ENST00000560078 NESP48681 1621 aa15.93■□□□□ 0.14
ZFYVE19-204ENST00000560078 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
ZFYVE19-204ENST00000560078 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
ZFYVE19-204ENST00000560078 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
ZFYVE19-204ENST00000560078 RAD54L2Q9Y4B4 1467 aa15.89■□□□□ 0.13
ZFYVE19-204ENST00000560078 BCL11AQ9H165 835 aa15.89■□□□□ 0.13
ZFYVE19-204ENST00000560078 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
ZFYVE19-204ENST00000560078 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
ZFYVE19-204ENST00000560078 RRBP1Q9P2E9 1410 aaKnown RBP15.88■□□□□ 0.13
ZFYVE19-204ENST00000560078 ZNF316A6NFI3 1004 aaPredicted RBP15.85■□□□□ 0.13
ZFYVE19-204ENST00000560078 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
ZFYVE19-204ENST00000560078 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
ZFYVE19-204ENST00000560078 TIAM1Q13009 1591 aa15.81■□□□□ 0.12
ZFYVE19-204ENST00000560078 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
ZFYVE19-204ENST00000560078 URB2Q14146 1524 aaKnown RBP15.8■□□□□ 0.12
ZFYVE19-204ENST00000560078 DHX57Q6P158 1386 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms