RNA–Protein interactions for RNA: ENST00000559995.1

INO80-206, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-206ENST00000559995 AEBP2Q6ZN18 517 aaPredicted RBP26.74■■□□□ 1.87
INO80-206ENST00000559995 CHIC1Q5VXU3 224 aa25.95■■□□□ 1.74
INO80-206ENST00000559995 SENP3Q9H4L4 574 aaPredicted RBP22.81■■□□□ 1.24
INO80-206ENST00000559995 PHF23Q9BUL5 403 aaPredicted RBP22.77■■□□□ 1.24
INO80-206ENST00000559995 FOXD1Q16676 465 aa21.14■□□□□ 0.97
INO80-206ENST00000559995 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
INO80-206ENST00000559995 ADRA2BP18089 450 aa20.17■□□□□ 0.82
INO80-206ENST00000559995 PPP6R1Q9UPN7 881 aa20.17■□□□□ 0.82
INO80-206ENST00000559995 PIAS4Q8N2W9 510 aaPredicted RBP19.94■□□□□ 0.78
INO80-206ENST00000559995 MSH5O43196 834 aa19.64■□□□□ 0.73
INO80-206ENST00000559995 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
INO80-206ENST00000559995 PPP4R3CPQ6ZMV5 832 aa18.48■□□□□ 0.55
INO80-206ENST00000559995 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
INO80-206ENST00000559995 POTEDQ86YR6 584 aa18.21■□□□□ 0.51
INO80-206ENST00000559995 DMRT2Q9Y5R5 561 aa18.15■□□□□ 0.5
INO80-206ENST00000559995 CNKSR2Q8WXI2 1034 aa18.03■□□□□ 0.48
INO80-206ENST00000559995 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
INO80-206ENST00000559995 KCNA4P22459 653 aa17.79■□□□□ 0.44
INO80-206ENST00000559995 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
INO80-206ENST00000559995 HOXD11P31277 338 aaPredicted RBP17.67■□□□□ 0.42
INO80-206ENST00000559995 NPM3O75607 178 aaKnown RBP17.66■□□□□ 0.42
INO80-206ENST00000559995 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
INO80-206ENST00000559995 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
INO80-206ENST00000559995 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
INO80-206ENST00000559995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.92■□□□□ 0.3
INO80-206ENST00000559995 RNF39Q9H2S5 420 aa16.77■□□□□ 0.28
INO80-206ENST00000559995 SLC4A2P04920 1241 aa16.7■□□□□ 0.26
INO80-206ENST00000559995 C1QBPQ07021 282 aaKnown RBP16.59■□□□□ 0.25
INO80-206ENST00000559995 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
INO80-206ENST00000559995 CACNB1Q02641 598 aaPredicted RBP16.54■□□□□ 0.24
INO80-206ENST00000559995 FOXD4L1Q9NU39 408 aa16.47■□□□□ 0.23
INO80-206ENST00000559995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
INO80-206ENST00000559995 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
INO80-206ENST00000559995 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
INO80-206ENST00000559995 ZBTB22O15209 634 aa16.32■□□□□ 0.2
INO80-206ENST00000559995 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
INO80-206ENST00000559995 APLP2Q06481 763 aa16.25■□□□□ 0.19
INO80-206ENST00000559995 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
INO80-206ENST00000559995 CAPN15O75808 1086 aa16.17■□□□□ 0.18
INO80-206ENST00000559995 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
INO80-206ENST00000559995 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
INO80-206ENST00000559995 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
INO80-206ENST00000559995 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
INO80-206ENST00000559995 ATXN8OSP0DMR3 200 aa15.91■□□□□ 0.14
INO80-206ENST00000559995 DSG3P32926 999 aa15.89■□□□□ 0.13
INO80-206ENST00000559995 ATF5Q9Y2D1 282 aaPredicted RBP15.87■□□□□ 0.13
INO80-206ENST00000559995 ABCB7O75027 752 aa15.81■□□□□ 0.12
INO80-206ENST00000559995 POLA2Q14181 598 aa15.7■□□□□ 0.1
INO80-206ENST00000559995 ZBTB12Q9Y330 459 aaPredicted RBP15.47■□□□□ 0.07
INO80-206ENST00000559995 FBLN2P98095 1184 aa15.32■□□□□ 0.04
INO80-206ENST00000559995 RBM42Q9BTD8 480 aaKnown RBP15.21■□□□□ 0.03
INO80-206ENST00000559995 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
INO80-206ENST00000559995 OSCARQ8IYS5 282 aa15.16■□□□□ 0.02
INO80-206ENST00000559995 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
INO80-206ENST00000559995 SPDYE6P0CI01 402 aa15□□□□□ -0.01
INO80-206ENST00000559995 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
INO80-206ENST00000559995 AKT1S1Q96B36 256 aa14.95□□□□□ -0.02
INO80-206ENST00000559995 ZNF692Q9BU19 519 aaPredicted RBP14.93□□□□□ -0.02
INO80-206ENST00000559995 SSUH2Q9Y2M2 353 aa14.82□□□□□ -0.04
INO80-206ENST00000559995 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
INO80-206ENST00000559995 REM2Q8IYK8 340 aaPredicted RBP14.79□□□□□ -0.04
INO80-206ENST00000559995 PABPN1Q86U42 306 aaKnown RBP eCLIP14.71□□□□□ -0.05
INO80-206ENST00000559995 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
INO80-206ENST00000559995 SPDYE1Q8NFV5 336 aaPredicted RBP14.63□□□□□ -0.07
INO80-206ENST00000559995 PITPNM1O00562 1244 aa14.61□□□□□ -0.07
INO80-206ENST00000559995 FKBP8Q14318 412 aa14.61□□□□□ -0.07
INO80-206ENST00000559995 CLEC11AQ9Y240 323 aa14.59□□□□□ -0.07
INO80-206ENST00000559995 STAG3Q9UJ98 1225 aa14.46□□□□□ -0.09
INO80-206ENST00000559995 PROM2Q8N271 834 aa14.44□□□□□ -0.1
INO80-206ENST00000559995 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
INO80-206ENST00000559995 POTEHQ6S545 545 aa14.41□□□□□ -0.1
INO80-206ENST00000559995 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
INO80-206ENST00000559995 FXR2P51116 673 aaKnown RBP eCLIP14.37□□□□□ -0.11
INO80-206ENST00000559995 PRKAR2AP13861 404 aaKnown RBP14.27□□□□□ -0.13
INO80-206ENST00000559995 CHADLQ6NUI6 762 aa14.2□□□□□ -0.14
INO80-206ENST00000559995 FBXO3Q9UK99 471 aa14.19□□□□□ -0.14
INO80-206ENST00000559995 CREBZFQ9NS37 354 aa14.13□□□□□ -0.15
INO80-206ENST00000559995 PLEKHG5O94827 1062 aa14.09□□□□□ -0.15
INO80-206ENST00000559995 MIER1Q8N108 512 aa14.09□□□□□ -0.15
INO80-206ENST00000559995 PLCD3Q8N3E9 789 aa14.06□□□□□ -0.16
INO80-206ENST00000559995 FARP1Q9Y4F1 1045 aaPredicted RBP14.06□□□□□ -0.16
INO80-206ENST00000559995 HAX1O00165 279 aa14.03□□□□□ -0.16
INO80-206ENST00000559995 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
INO80-206ENST00000559995 VASPP50552 380 aaPredicted RBP13.95□□□□□ -0.18
INO80-206ENST00000559995 MNX1P50219 401 aaPredicted RBP13.92□□□□□ -0.18
INO80-206ENST00000559995 ZBTB47Q9UFB7 747 aaPredicted RBP13.92□□□□□ -0.18
INO80-206ENST00000559995 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
INO80-206ENST00000559995 CD44P16070 742 aaKnown RBP13.86□□□□□ -0.19
INO80-206ENST00000559995 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
INO80-206ENST00000559995 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
INO80-206ENST00000559995 EVX2Q03828 476 aa13.8□□□□□ -0.2
INO80-206ENST00000559995 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
INO80-206ENST00000559995 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
INO80-206ENST00000559995 IFNLR1Q8IU57 520 aaPredicted RBP13.72□□□□□ -0.21
INO80-206ENST00000559995 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
INO80-206ENST00000559995 NUBP1P53384 320 aa13.68□□□□□ -0.22
INO80-206ENST00000559995 RASEFQ8IZ41 740 aa13.68□□□□□ -0.22
INO80-206ENST00000559995 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
INO80-206ENST00000559995 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
INO80-206ENST00000559995 FAM212AQ96EL1 285 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms