RNA–Protein interactions for RNA: ENST00000559904.1

AC093334.1-201, humanhuman

TSL 3 BASIC

Gene AC093334.1, Length 423 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093334.1-201ENST00000559904 AEBP2Q6ZN18 517 aaPredicted RBP29.94■■■□□ 2.38
AC093334.1-201ENST00000559904 CHIC1Q5VXU3 224 aa29.27■■■□□ 2.28
AC093334.1-201ENST00000559904 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
AC093334.1-201ENST00000559904 SENP3Q9H4L4 574 aaPredicted RBP25.32■■□□□ 1.64
AC093334.1-201ENST00000559904 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
AC093334.1-201ENST00000559904 FOXD1Q16676 465 aa23.54■■□□□ 1.36
AC093334.1-201ENST00000559904 ADRA2BP18089 450 aa22.75■■□□□ 1.23
AC093334.1-201ENST00000559904 PPP6R1Q9UPN7 881 aa22.74■■□□□ 1.23
AC093334.1-201ENST00000559904 PIAS4Q8N2W9 510 aaPredicted RBP22.24■■□□□ 1.15
AC093334.1-201ENST00000559904 MSH5O43196 834 aa21.61■■□□□ 1.05
AC093334.1-201ENST00000559904 PPP4R3CPQ6ZMV5 832 aa21.02■□□□□ 0.96
AC093334.1-201ENST00000559904 SCAF1Q9H7N4 1312 aaKnown RBP20.7■□□□□ 0.9
AC093334.1-201ENST00000559904 KCNA4P22459 653 aa20.67■□□□□ 0.9
AC093334.1-201ENST00000559904 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
AC093334.1-201ENST00000559904 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
AC093334.1-201ENST00000559904 CNKSR2Q8WXI2 1034 aa20.37■□□□□ 0.85
AC093334.1-201ENST00000559904 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
AC093334.1-201ENST00000559904 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
AC093334.1-201ENST00000559904 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
AC093334.1-201ENST00000559904 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
AC093334.1-201ENST00000559904 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
AC093334.1-201ENST00000559904 POTEDQ86YR6 584 aa19.59■□□□□ 0.73
AC093334.1-201ENST00000559904 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
AC093334.1-201ENST00000559904 DNAJC5BQ9UF47 199 aa19.42■□□□□ 0.7
AC093334.1-201ENST00000559904 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
AC093334.1-201ENST00000559904 SLC4A2P04920 1241 aa19.05■□□□□ 0.64
AC093334.1-201ENST00000559904 ZBTB22O15209 634 aa19.03■□□□□ 0.64
AC093334.1-201ENST00000559904 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
AC093334.1-201ENST00000559904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.63
AC093334.1-201ENST00000559904 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
AC093334.1-201ENST00000559904 U3KPZ7 1027 aaPredicted RBP18.67■□□□□ 0.58
AC093334.1-201ENST00000559904 MYCNP04198 464 aaPredicted RBP18.64■□□□□ 0.57
AC093334.1-201ENST00000559904 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
AC093334.1-201ENST00000559904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.37■□□□□ 0.53
AC093334.1-201ENST00000559904 HNRNPUL2Q1KMD3 747 aaKnown RBP18.37■□□□□ 0.53
AC093334.1-201ENST00000559904 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
AC093334.1-201ENST00000559904 C1QBPQ07021 282 aaKnown RBP18.29■□□□□ 0.52
AC093334.1-201ENST00000559904 ATXN8OSP0DMR3 200 aa18.2■□□□□ 0.5
AC093334.1-201ENST00000559904 ATF5Q9Y2D1 282 aaPredicted RBP18.2■□□□□ 0.5
AC093334.1-201ENST00000559904 APLP2Q06481 763 aa18.16■□□□□ 0.5
AC093334.1-201ENST00000559904 SPINK5Q9NQ38 1064 aaPredicted RBP18.16■□□□□ 0.5
AC093334.1-201ENST00000559904 CAPN15O75808 1086 aa18.08■□□□□ 0.48
AC093334.1-201ENST00000559904 CACNB1Q02641 598 aaPredicted RBP18.05■□□□□ 0.48
AC093334.1-201ENST00000559904 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
AC093334.1-201ENST00000559904 ZNF219Q9P2Y4 722 aaPredicted RBP17.93■□□□□ 0.46
AC093334.1-201ENST00000559904 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
AC093334.1-201ENST00000559904 ABCB7O75027 752 aa17.78■□□□□ 0.44
AC093334.1-201ENST00000559904 POLA2Q14181 598 aa17.71■□□□□ 0.43
AC093334.1-201ENST00000559904 DSG3P32926 999 aa17.7■□□□□ 0.42
AC093334.1-201ENST00000559904 SLC24A1O60721 1099 aa17.52■□□□□ 0.4
AC093334.1-201ENST00000559904 MKRN4PQ13434 485 aaPredicted RBP17.39■□□□□ 0.37
AC093334.1-201ENST00000559904 FBLN2P98095 1184 aa17.37■□□□□ 0.37
AC093334.1-201ENST00000559904 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
AC093334.1-201ENST00000559904 FKBP8Q14318 412 aa17.19■□□□□ 0.34
AC093334.1-201ENST00000559904 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
AC093334.1-201ENST00000559904 SPDYE4A6NLX3 237 aa17.04■□□□□ 0.32
AC093334.1-201ENST00000559904 ZNF692Q9BU19 519 aaPredicted RBP16.91■□□□□ 0.3
AC093334.1-201ENST00000559904 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
AC093334.1-201ENST00000559904 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
AC093334.1-201ENST00000559904 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
AC093334.1-201ENST00000559904 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
AC093334.1-201ENST00000559904 SSUH2Q9Y2M2 353 aa16.79■□□□□ 0.28
AC093334.1-201ENST00000559904 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
AC093334.1-201ENST00000559904 PROM2Q8N271 834 aa16.68■□□□□ 0.26
AC093334.1-201ENST00000559904 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
AC093334.1-201ENST00000559904 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
AC093334.1-201ENST00000559904 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
AC093334.1-201ENST00000559904 CLEC11AQ9Y240 323 aa16.42■□□□□ 0.22
AC093334.1-201ENST00000559904 SPDYE1Q8NFV5 336 aaPredicted RBP16.4■□□□□ 0.22
AC093334.1-201ENST00000559904 PITPNM1O00562 1244 aa16.36■□□□□ 0.21
AC093334.1-201ENST00000559904 STAG3Q9UJ98 1225 aa16.36■□□□□ 0.21
AC093334.1-201ENST00000559904 VASPP50552 380 aaPredicted RBP16.28■□□□□ 0.2
AC093334.1-201ENST00000559904 PRR29P0C7W0 189 aa16.22■□□□□ 0.19
AC093334.1-201ENST00000559904 MIER1Q8N108 512 aa16.15■□□□□ 0.18
AC093334.1-201ENST00000559904 PLCD3Q8N3E9 789 aa16.15■□□□□ 0.18
AC093334.1-201ENST00000559904 CHRDL2Q6WN34 429 aa16.13■□□□□ 0.17
AC093334.1-201ENST00000559904 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
AC093334.1-201ENST00000559904 CREBZFQ9NS37 354 aa16.04■□□□□ 0.16
AC093334.1-201ENST00000559904 PLEKHG5O94827 1062 aa16.02■□□□□ 0.16
AC093334.1-201ENST00000559904 CHADLQ6NUI6 762 aa16.02■□□□□ 0.16
AC093334.1-201ENST00000559904 KLHL34Q8N239 644 aa16.02■□□□□ 0.16
AC093334.1-201ENST00000559904 FXR2P51116 673 aaKnown RBP eCLIP15.98■□□□□ 0.15
AC093334.1-201ENST00000559904 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
AC093334.1-201ENST00000559904 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
AC093334.1-201ENST00000559904 ZBTB47Q9UFB7 747 aaPredicted RBP15.87■□□□□ 0.13
AC093334.1-201ENST00000559904 MNX1P50219 401 aaPredicted RBP15.86■□□□□ 0.13
AC093334.1-201ENST00000559904 SPOCK2Q92563 424 aa15.85■□□□□ 0.13
AC093334.1-201ENST00000559904 RTN4Q9NQC3 1192 aaKnown RBP15.85■□□□□ 0.13
AC093334.1-201ENST00000559904 FARP1Q9Y4F1 1045 aaPredicted RBP15.8■□□□□ 0.12
AC093334.1-201ENST00000559904 DAXXQ9UER7 740 aaPredicted RBP15.79■□□□□ 0.12
AC093334.1-201ENST00000559904 NPM1P06748 294 aaKnown RBP eCLIP15.74■□□□□ 0.11
AC093334.1-201ENST00000559904 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
AC093334.1-201ENST00000559904 CCDC180Q9P1Z9 1646 aa15.74■□□□□ 0.11
AC093334.1-201ENST00000559904 NUBP1P53384 320 aa15.71■□□□□ 0.11
AC093334.1-201ENST00000559904 RASEFQ8IZ41 740 aa15.66■□□□□ 0.1
AC093334.1-201ENST00000559904 CIZ1Q9ULV3 898 aaPredicted RBP15.65■□□□□ 0.1
AC093334.1-201ENST00000559904 DCAF8Q5TAQ9 597 aa15.61■□□□□ 0.09
AC093334.1-201ENST00000559904 FAM212AQ96EL1 285 aa15.58■□□□□ 0.08
AC093334.1-201ENST00000559904 TSPYL2Q9H2G4 693 aaPredicted RBP15.58■□□□□ 0.08
AC093334.1-201ENST00000559904 PKD2Q13563 968 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms