RNA–Protein interactions for RNA: ENST00000559746.1

THBS1-207, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-207ENST00000559746 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
THBS1-207ENST00000559746 CHIC1Q5VXU3 224 aa26.47■■□□□ 1.83
THBS1-207ENST00000559746 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
THBS1-207ENST00000559746 SENP3Q9H4L4 574 aaPredicted RBP22.46■■□□□ 1.19
THBS1-207ENST00000559746 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
THBS1-207ENST00000559746 FOXD1Q16676 465 aa20.82■□□□□ 0.92
THBS1-207ENST00000559746 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
THBS1-207ENST00000559746 ADRA2BP18089 450 aa20.43■□□□□ 0.86
THBS1-207ENST00000559746 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
THBS1-207ENST00000559746 KCNA4P22459 653 aa19.34■□□□□ 0.69
THBS1-207ENST00000559746 PPP4R3CPQ6ZMV5 832 aa19.19■□□□□ 0.66
THBS1-207ENST00000559746 MSH5O43196 834 aa18.96■□□□□ 0.63
THBS1-207ENST00000559746 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
THBS1-207ENST00000559746 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
THBS1-207ENST00000559746 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
THBS1-207ENST00000559746 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
THBS1-207ENST00000559746 CNKSR2Q8WXI2 1034 aa18.53■□□□□ 0.56
THBS1-207ENST00000559746 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
THBS1-207ENST00000559746 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
THBS1-207ENST00000559746 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
THBS1-207ENST00000559746 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
THBS1-207ENST00000559746 DMRT2Q9Y5R5 561 aa18.03■□□□□ 0.48
THBS1-207ENST00000559746 DNAJC5BQ9UF47 199 aa17.97■□□□□ 0.47
THBS1-207ENST00000559746 HOXD11P31277 338 aaPredicted RBP17.86■□□□□ 0.45
THBS1-207ENST00000559746 ZBTB22O15209 634 aa17.84■□□□□ 0.45
THBS1-207ENST00000559746 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.41
THBS1-207ENST00000559746 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
THBS1-207ENST00000559746 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
THBS1-207ENST00000559746 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
THBS1-207ENST00000559746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.98■□□□□ 0.31
THBS1-207ENST00000559746 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
THBS1-207ENST00000559746 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
THBS1-207ENST00000559746 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.7■□□□□ 0.26
THBS1-207ENST00000559746 HNRNPUL2Q1KMD3 747 aaKnown RBP16.7■□□□□ 0.26
THBS1-207ENST00000559746 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
THBS1-207ENST00000559746 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
THBS1-207ENST00000559746 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
THBS1-207ENST00000559746 APLP2Q06481 763 aa16.39■□□□□ 0.21
THBS1-207ENST00000559746 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
THBS1-207ENST00000559746 FKBP8Q14318 412 aa16.32■□□□□ 0.2
THBS1-207ENST00000559746 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
THBS1-207ENST00000559746 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
THBS1-207ENST00000559746 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
THBS1-207ENST00000559746 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
THBS1-207ENST00000559746 CAPN15O75808 1086 aa16.06■□□□□ 0.16
THBS1-207ENST00000559746 MKRN4PQ13434 485 aaPredicted RBP15.98■□□□□ 0.15
THBS1-207ENST00000559746 POLA2Q14181 598 aa15.97■□□□□ 0.15
THBS1-207ENST00000559746 FBLN2P98095 1184 aa15.87■□□□□ 0.13
THBS1-207ENST00000559746 ABCB7O75027 752 aa15.83■□□□□ 0.12
THBS1-207ENST00000559746 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
THBS1-207ENST00000559746 RTN4Q9NQC3 1192 aaKnown RBP15.76■□□□□ 0.11
THBS1-207ENST00000559746 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
THBS1-207ENST00000559746 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
THBS1-207ENST00000559746 DSG3P32926 999 aa15.7■□□□□ 0.1
THBS1-207ENST00000559746 PROM2Q8N271 834 aa15.68■□□□□ 0.1
THBS1-207ENST00000559746 FBXO3Q9UK99 471 aa15.57■□□□□ 0.08
THBS1-207ENST00000559746 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
THBS1-207ENST00000559746 OSCARQ8IYS5 282 aa15.44■□□□□ 0.06
THBS1-207ENST00000559746 VASPP50552 380 aaPredicted RBP15.39■□□□□ 0.05
THBS1-207ENST00000559746 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
THBS1-207ENST00000559746 SPDYE2BA6NHP3 402 aa15.36■□□□□ 0.05
THBS1-207ENST00000559746 SPDYE6P0CI01 402 aa15.36■□□□□ 0.05
THBS1-207ENST00000559746 SPDYE2Q495Y8 402 aa15.36■□□□□ 0.05
THBS1-207ENST00000559746 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
THBS1-207ENST00000559746 IFNLR1Q8IU57 520 aaPredicted RBP15.23■□□□□ 0.03
THBS1-207ENST00000559746 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
THBS1-207ENST00000559746 STAG3Q9UJ98 1225 aa15.11■□□□□ 0.01
THBS1-207ENST00000559746 SLC24A1O60721 1099 aa15.04■□□□□ -0
THBS1-207ENST00000559746 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
THBS1-207ENST00000559746 PLCD3Q8N3E9 789 aa14.96□□□□□ -0.01
THBS1-207ENST00000559746 PKD2Q13563 968 aa14.92□□□□□ -0.02
THBS1-207ENST00000559746 MIER1Q8N108 512 aa14.92□□□□□ -0.02
THBS1-207ENST00000559746 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
THBS1-207ENST00000559746 RBM42Q9BTD8 480 aaKnown RBP14.91□□□□□ -0.02
THBS1-207ENST00000559746 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
THBS1-207ENST00000559746 SPDYE1Q8NFV5 336 aaPredicted RBP14.78□□□□□ -0.04
THBS1-207ENST00000559746 PLEKHG5O94827 1062 aa14.77□□□□□ -0.05
THBS1-207ENST00000559746 ZBTB47Q9UFB7 747 aaPredicted RBP14.75□□□□□ -0.05
THBS1-207ENST00000559746 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
THBS1-207ENST00000559746 DCAF8L2P0C7V8 631 aa14.71□□□□□ -0.05
THBS1-207ENST00000559746 ECM2O94769 699 aaPredicted RBP14.7□□□□□ -0.06
THBS1-207ENST00000559746 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
THBS1-207ENST00000559746 PRR29P0C7W0 189 aa14.61□□□□□ -0.07
THBS1-207ENST00000559746 CIZ1Q9ULV3 898 aaPredicted RBP14.6□□□□□ -0.07
THBS1-207ENST00000559746 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
THBS1-207ENST00000559746 PLCB2Q00722 1185 aa14.58□□□□□ -0.08
THBS1-207ENST00000559746 RGL2O15211 777 aa14.57□□□□□ -0.08
THBS1-207ENST00000559746 PITPNM1O00562 1244 aa14.56□□□□□ -0.08
THBS1-207ENST00000559746 NUBP1P53384 320 aa14.54□□□□□ -0.08
THBS1-207ENST00000559746 MNX1P50219 401 aaPredicted RBP14.53□□□□□ -0.08
THBS1-207ENST00000559746 TRIM41Q8WV44 630 aa14.48□□□□□ -0.09
THBS1-207ENST00000559746 NPM1P06748 294 aaKnown RBP eCLIP14.46□□□□□ -0.09
THBS1-207ENST00000559746 GSE1Q14687 1217 aa14.46□□□□□ -0.09
THBS1-207ENST00000559746 BBXQ8WY36 941 aaPredicted RBP14.4□□□□□ -0.1
THBS1-207ENST00000559746 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
THBS1-207ENST00000559746 RNF25Q96BH1 459 aaPredicted RBP14.37□□□□□ -0.11
THBS1-207ENST00000559746 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
THBS1-207ENST00000559746 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
THBS1-207ENST00000559746 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.34□□□□□ -0.11
THBS1-207ENST00000559746 HAP1P54257 671 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms