RNA–Protein interactions for RNA: ENST00000559275.5

RNF31-211, Transcript of ring finger protein 31, humanhuman

TSL 1 (best) BASIC

Gene RNF31, Length 3,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31-211ENST00000559275 NISCHQ9Y2I1 1504 aa21.8■■□□□ 1.08
RNF31-211ENST00000559275 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
RNF31-211ENST00000559275 CCDC180Q9P1Z9 1646 aa18.53■□□□□ 0.56
RNF31-211ENST00000559275 SHROOM4Q9ULL8 1493 aa18.53■□□□□ 0.56
RNF31-211ENST00000559275 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
RNF31-211ENST00000559275 SUPT5HO00267 1087 aaKnown RBP18.23■□□□□ 0.51
RNF31-211ENST00000559275 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
RNF31-211ENST00000559275 ABCC9O60706 1549 aa17.89■□□□□ 0.45
RNF31-211ENST00000559275 CHIC1Q5VXU3 224 aa17.85■□□□□ 0.45
RNF31-211ENST00000559275 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
RNF31-211ENST00000559275 HRCP23327 699 aa17.52■□□□□ 0.39
RNF31-211ENST00000559275 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
RNF31-211ENST00000559275 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
RNF31-211ENST00000559275 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
RNF31-211ENST00000559275 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
RNF31-211ENST00000559275 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■□□ 18.4
RNF31-211ENST00000559275 RB1CC1Q8TDY2 1594 aa17.14■□□□□ 0.33
RNF31-211ENST00000559275 NACADO15069 1562 aa17.08■□□□□ 0.33
RNF31-211ENST00000559275 TRIM26Q12899 539 aaPredicted RBP17.08■□□□□ 0.33
RNF31-211ENST00000559275 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
RNF31-211ENST00000559275 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
RNF31-211ENST00000559275 CECR2Q9BXF3 1484 aa16.98■□□□□ 0.31
RNF31-211ENST00000559275 MROH2BQ7Z745 1585 aa16.92■□□□□ 0.3
RNF31-211ENST00000559275 WIZO95785 1651 aa16.84■□□□□ 0.29
RNF31-211ENST00000559275 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
RNF31-211ENST00000559275 EHMT2Q96KQ7 1210 aa16.81■□□□□ 0.28
RNF31-211ENST00000559275 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
RNF31-211ENST00000559275 ZEB1P37275 1124 aaPredicted RBP16.79■□□□□ 0.28
RNF31-211ENST00000559275 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
RNF31-211ENST00000559275 UNC13AQ9UPW8 1703 aa16.64■□□□□ 0.25
RNF31-211ENST00000559275 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
RNF31-211ENST00000559275 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
RNF31-211ENST00000559275 BICRAQ9NZM4 1560 aa16.55■□□□□ 0.24
RNF31-211ENST00000559275 SMARCA2P51531 1590 aa16.52■□□□□ 0.23
RNF31-211ENST00000559275 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.23
RNF31-211ENST00000559275 ABCC8Q09428 1581 aa16.48■□□□□ 0.23
RNF31-211ENST00000559275 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
RNF31-211ENST00000559275 EEA1Q15075 1411 aa16.37■□□□□ 0.21
RNF31-211ENST00000559275 CEP162Q5TB80 1403 aa16.36■□□□□ 0.21
RNF31-211ENST00000559275 SOGA1O94964 1423 aa16.35■□□□□ 0.21
RNF31-211ENST00000559275 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
RNF31-211ENST00000559275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
RNF31-211ENST00000559275 PEG3Q9GZU2 1588 aa16.3■□□□□ 0.2
RNF31-211ENST00000559275 CCER1Q8TC90 406 aaPredicted RBP16.3■□□□□ 0.2
RNF31-211ENST00000559275 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
RNF31-211ENST00000559275 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
RNF31-211ENST00000559275 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
RNF31-211ENST00000559275 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
RNF31-211ENST00000559275 UBTFP17480 764 aaKnown RBP16.18■□□□□ 0.18
RNF31-211ENST00000559275 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
RNF31-211ENST00000559275 DNAJC5BQ9UF47 199 aa16.17■□□□□ 0.18
RNF31-211ENST00000559275 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
RNF31-211ENST00000559275 KIF21BO75037 1637 aa16.14■□□□□ 0.17
RNF31-211ENST00000559275 CEP164Q9UPV0 1460 aa16.13■□□□□ 0.17
RNF31-211ENST00000559275 BAZ1BQ9UIG0 1483 aaKnown RBP16.12■□□□□ 0.17
RNF31-211ENST00000559275 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
RNF31-211ENST00000559275 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
RNF31-211ENST00000559275 DIEXFQ68CQ4 756 aaKnown RBP16.06■□□□□ 0.16
RNF31-211ENST00000559275 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
RNF31-211ENST00000559275 CLIP1P30622 1438 aa16.02■□□□□ 0.16
RNF31-211ENST00000559275 ACIN1Q9UKV3 1341 aaKnown RBP16.02■□□□□ 0.15
RNF31-211ENST00000559275 VPS8Q8N3P4 1428 aa15.99■□□□□ 0.15
RNF31-211ENST00000559275 TOP2BQ02880 1626 aa15.97■□□□□ 0.15
RNF31-211ENST00000559275 RAPGEF2Q9Y4G8 1499 aa15.96■□□□□ 0.15
RNF31-211ENST00000559275 NEUROD1Q13562 356 aa15.95■□□□□ 0.14
RNF31-211ENST00000559275 ZNF316A6NFI3 1004 aaPredicted RBP15.93■□□□□ 0.14
RNF31-211ENST00000559275 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
RNF31-211ENST00000559275 CENPBP07199 599 aaPredicted RBP15.92■□□□□ 0.14
RNF31-211ENST00000559275 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
RNF31-211ENST00000559275 HNRNPUL2Q1KMD3 747 aaKnown RBP15.87■□□□□ 0.13
RNF31-211ENST00000559275 APLP2Q06481 763 aa15.86■□□□□ 0.13
RNF31-211ENST00000559275 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
RNF31-211ENST00000559275 NCAPD3P42695 1498 aa15.85■□□□□ 0.13
RNF31-211ENST00000559275 PRXQ9BXM0 1461 aa15.84■□□□□ 0.13
RNF31-211ENST00000559275 HMGXB3Q12766 1538 aa15.82■□□□□ 0.12
RNF31-211ENST00000559275 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
RNF31-211ENST00000559275 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
RNF31-211ENST00000559275 NESP48681 1621 aa15.76■□□□□ 0.11
RNF31-211ENST00000559275 CUX1P39880 1505 aa15.76■□□□□ 0.11
RNF31-211ENST00000559275 CLSPNQ9HAW4 1339 aa15.72■□□□□ 0.11
RNF31-211ENST00000559275 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
RNF31-211ENST00000559275 CFTRP13569 1480 aa15.7■□□□□ 0.1
RNF31-211ENST00000559275 MIER1Q8N108 512 aa15.68■□□□□ 0.1
RNF31-211ENST00000559275 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
RNF31-211ENST00000559275 RRBP1Q9P2E9 1410 aaKnown RBP15.65■□□□□ 0.1
RNF31-211ENST00000559275 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
RNF31-211ENST00000559275 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
RNF31-211ENST00000559275 PRDM2Q13029 1718 aa15.62■□□□□ 0.09
RNF31-211ENST00000559275 YTHDC1Q96MU7 727 aaKnown RBP15.61■□□□□ 0.09
RNF31-211ENST00000559275 ARHGAP35Q9NRY4 1499 aa15.61■□□□□ 0.09
RNF31-211ENST00000559275 CUX2O14529 1486 aa15.61■□□□□ 0.09
RNF31-211ENST00000559275 CCNB3Q8WWL7 1395 aa15.55■□□□□ 0.08
RNF31-211ENST00000559275 IGF1RP08069 1367 aa15.52■□□□□ 0.08
RNF31-211ENST00000559275 MAP3K1Q13233 1512 aa15.52■□□□□ 0.08
RNF31-211ENST00000559275 P3H3Q8IVL6 736 aa15.51■□□□□ 0.07
RNF31-211ENST00000559275 FANCD2Q9BXW9 1451 aa15.51■□□□□ 0.07
RNF31-211ENST00000559275 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
RNF31-211ENST00000559275 TIAM1Q13009 1591 aa15.48■□□□□ 0.07
RNF31-211ENST00000559275 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
RNF31-211ENST00000559275 CARMIL1Q5VZK9 1371 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms