RNA–Protein interactions for RNA: ENST00000558964.5

NEO1-206, Transcript of neogenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEO1, Length 4,441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-206ENST00000558964 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
NEO1-206ENST00000558964 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
NEO1-206ENST00000558964 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
NEO1-206ENST00000558964 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
NEO1-206ENST00000558964 EHMT2Q96KQ7 1210 aa26.92■■□□□ 1.9
NEO1-206ENST00000558964 FAM9AQ8IZU1 332 aaPredicted RBP26.43■■□□□ 1.82
NEO1-206ENST00000558964 APLP2Q06481 763 aa26.07■■□□□ 1.76
NEO1-206ENST00000558964 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
NEO1-206ENST00000558964 TTBK1Q5TCY1 1321 aaPredicted RBP25.9■■□□□ 1.74
NEO1-206ENST00000558964 RANGAP1P46060 587 aaPredicted RBP25.84■■□□□ 1.73
NEO1-206ENST00000558964 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
NEO1-206ENST00000558964 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
NEO1-206ENST00000558964 ABCC9O60706 1549 aa25.48■■□□□ 1.67
NEO1-206ENST00000558964 ATP1B4Q9UN42 357 aaPredicted RBP25.46■■□□□ 1.67
NEO1-206ENST00000558964 PABPN1Q86U42 306 aaKnown RBP eCLIP25.24■■□□□ 1.63
NEO1-206ENST00000558964 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
NEO1-206ENST00000558964 PPARGC1BQ86YN6 1023 aaKnown RBP25.18■■□□□ 1.62
NEO1-206ENST00000558964 CCER1Q8TC90 406 aaPredicted RBP25.15■■□□□ 1.62
NEO1-206ENST00000558964 LOC105371045A0A1W2PR82 267 aa25.09■■□□□ 1.61
NEO1-206ENST00000558964 ZEB1P37275 1124 aaPredicted RBP24.92■■□□□ 1.58
NEO1-206ENST00000558964 TRIM26Q12899 539 aaPredicted RBP24.75■■□□□ 1.55
NEO1-206ENST00000558964 PELP1Q8IZL8 1130 aaKnown RBP24.68■■□□□ 1.54
NEO1-206ENST00000558964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
NEO1-206ENST00000558964 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
NEO1-206ENST00000558964 ITGAEP38570 1179 aa24.67■■□□□ 1.54
NEO1-206ENST00000558964 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
NEO1-206ENST00000558964 ZCCHC6Q5VYS8 1495 aaKnown RBP24.43■■□□□ 1.5
NEO1-206ENST00000558964 MYT1LQ9UL68 1186 aa24.36■■□□□ 1.49
NEO1-206ENST00000558964 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
NEO1-206ENST00000558964 HRCP23327 699 aa24.29■■□□□ 1.48
NEO1-206ENST00000558964 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
NEO1-206ENST00000558964 CCDC180Q9P1Z9 1646 aa24.18■■□□□ 1.46
NEO1-206ENST00000558964 FBLN2P98095 1184 aa24.11■■□□□ 1.45
NEO1-206ENST00000558964 FAM50AQ14320 339 aaKnown RBP24.09■■□□□ 1.45
NEO1-206ENST00000558964 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
NEO1-206ENST00000558964 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
NEO1-206ENST00000558964 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
NEO1-206ENST00000558964 NEFLP07196 543 aa23.92■■□□□ 1.42
NEO1-206ENST00000558964 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.41
NEO1-206ENST00000558964 TRIM52Q96A61 297 aa23.83■■□□□ 1.41
NEO1-206ENST00000558964 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
NEO1-206ENST00000558964 NEUROD1Q13562 356 aa23.74■■□□□ 1.39
NEO1-206ENST00000558964 RB1CC1Q8TDY2 1594 aa23.73■■□□□ 1.39
NEO1-206ENST00000558964 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
NEO1-206ENST00000558964 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
NEO1-206ENST00000558964 ERICH6Q7L0X2 663 aa23.62■■□□□ 1.37
NEO1-206ENST00000558964 NACADO15069 1562 aa23.57■■□□□ 1.36
NEO1-206ENST00000558964 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
NEO1-206ENST00000558964 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
NEO1-206ENST00000558964 ZNF777Q9ULD5 760 aaPredicted RBP23.49■■□□□ 1.35
NEO1-206ENST00000558964 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
NEO1-206ENST00000558964 CECR2Q9BXF3 1484 aa23.32■■□□□ 1.32
NEO1-206ENST00000558964 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
NEO1-206ENST00000558964 BAZ1BQ9UIG0 1483 aaKnown RBP23.29■■□□□ 1.32
NEO1-206ENST00000558964 CHMP7Q8WUX9 453 aaPredicted RBP23.24■■□□□ 1.31
NEO1-206ENST00000558964 ZNF316A6NFI3 1004 aaPredicted RBP23.24■■□□□ 1.31
NEO1-206ENST00000558964 WRNQ14191 1432 aaPredicted RBP eCLIP23.2■■□□□ 1.3
NEO1-206ENST00000558964 CLIP1P30622 1438 aa23.17■■□□□ 1.3
NEO1-206ENST00000558964 ANP32CO43423 234 aa23.16■■□□□ 1.3
NEO1-206ENST00000558964 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
NEO1-206ENST00000558964 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
NEO1-206ENST00000558964 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
NEO1-206ENST00000558964 NPM1P06748 294 aaKnown RBP eCLIP23.14■■□□□ 1.29
NEO1-206ENST00000558964 MTUS2Q5JR59 1369 aa23.07■■□□□ 1.28
NEO1-206ENST00000558964 EEA1Q15075 1411 aa23.06■■□□□ 1.28
NEO1-206ENST00000558964 BCANQ96GW7 911 aa23.02■■□□□ 1.28
NEO1-206ENST00000558964 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
NEO1-206ENST00000558964 TONSLQ96HA7 1378 aa22.99■■□□□ 1.27
NEO1-206ENST00000558964 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
NEO1-206ENST00000558964 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
NEO1-206ENST00000558964 TSPY4P0CV99 314 aa22.96■■□□□ 1.27
NEO1-206ENST00000558964 TSPY10P0CW01 314 aa22.96■■□□□ 1.27
NEO1-206ENST00000558964 CHGAP10645 457 aaKnown RBP22.95■■□□□ 1.26
NEO1-206ENST00000558964 DAXXQ9UER7 740 aaPredicted RBP22.95■■□□□ 1.26
NEO1-206ENST00000558964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.94■■□□□ 1.26
NEO1-206ENST00000558964 MROH2BQ7Z745 1585 aa22.94■■□□□ 1.26
NEO1-206ENST00000558964 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
NEO1-206ENST00000558964 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
NEO1-206ENST00000558964 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
NEO1-206ENST00000558964 GTF3C3Q9Y5Q9 886 aa22.85■■□□□ 1.25
NEO1-206ENST00000558964 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
NEO1-206ENST00000558964 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
NEO1-206ENST00000558964 PLEKHD1A6NEE1 506 aa22.83■■□□□ 1.24
NEO1-206ENST00000558964 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
NEO1-206ENST00000558964 CEP164Q9UPV0 1460 aa22.81■■□□□ 1.24
NEO1-206ENST00000558964 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
NEO1-206ENST00000558964 STAG3Q9UJ98 1225 aa22.81■■□□□ 1.24
NEO1-206ENST00000558964 SOGA1O94964 1423 aa22.78■■□□□ 1.24
NEO1-206ENST00000558964 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
NEO1-206ENST00000558964 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
NEO1-206ENST00000558964 KDM2AQ9Y2K7 1162 aa22.74■■□□□ 1.23
NEO1-206ENST00000558964 CUX2O14529 1486 aa22.7■■□□□ 1.22
NEO1-206ENST00000558964 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
NEO1-206ENST00000558964 HIRIP3Q9BW71 556 aaPredicted RBP22.67■■□□□ 1.22
NEO1-206ENST00000558964 CFDP1Q9UEE9 299 aaPredicted RBP22.67■■□□□ 1.22
NEO1-206ENST00000558964 NEFMP07197 916 aa22.64■■□□□ 1.21
NEO1-206ENST00000558964 SLC24A1O60721 1099 aa22.63■■□□□ 1.21
NEO1-206ENST00000558964 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
NEO1-206ENST00000558964 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
NEO1-206ENST00000558964 SMARCA2P51531 1590 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 322.8 ms